Q2GKB1
Gene name |
thiC |
Protein name |
Phosphomethylpyrimidine synthase |
Names |
Hydroxymethylpyrimidine phosphate synthase, HMP-P synthase, HMP-phosphate synthase, HMPP synthase, Thiamine biosynthesis protein ThiC |
Species |
Anaplasma phagocytophilum (strain HZ) |
KEGG Pathway |
aph:APH_0600 |
EC number |
4.1.99.17: Other carbon-carbon lyases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q2GKB1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q2GKB1-F1 | Predicted | AlphaFoldDB |
No variants for Q2GKB1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q2GKB1 | |||||
No associated diseases with Q2GKB1
1 regional properties for Q2GKB1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | ThiC-associated domain | 9 - 77 | IPR025747 |
Functions
| Description | ||
|---|---|---|
| EC Number | 4.1.99.17 | Other carbon-carbon lyases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| 4 iron, 4 sulfur cluster binding | Binding to a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. |
| carbon-carbon lyase activity | Catalysis of the cleavage of C-C bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. |
| zinc ion binding | Binding to a zinc ion (Zn). |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| thiamine biosynthetic process | The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver. |
| thiamine diphosphate biosynthetic process | The chemical reactions and pathways resulting in the formation of thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MHMNISEIYP | SSNKIYINCT | LYPDVKVGMR | QINIRNSSQR | FLLYDTAGPY | TDCDIKVNLT |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EGISSIRRDW | IARRNDTYPI | RKAKTNSDAR | GVKALSGDDR | VILKGIAGGA | PVTQLFYAKK |
| 130 | 140 | 150 | 160 | 170 | 180 |
| GIITPEMEYV | AVRENALLEQ | AEAIPGLLLP | TKTRKITPEF | VREEVACGRA | VIPSNINHPE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SEPMIIGRNF | LVKINANIGN | SAVLSNIEDE | VKKMVLAVTY | GADTVMDLST | GHDIHNIREL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| IVRNSPVPIG | TVPIYQALNK | VNGIVGDLSF | EVFKETIIEQ | AEQGVDYFTI | HAGVLKSYIE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| HTRSRTTGIV | SRGGAIMAQW | CLLHNKENFL | YENFEEICEI | MRSYDVTFSL | GDGLRPGSIN |
| 370 | 380 | 390 | 400 | 410 | 420 |
| DANDVAQFLE | LRTLGELVKI | ARAHDCQVIV | EGPGHVPMHL | IEENVKKQLD | FCDEAPFYTL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| GPLTTDIAPG | YDHITSAIGA | AMIGWYGTAM | LCYVTPKEHL | GLPNAEDVKA | GVISYKIAAH |
| 490 | 500 | 510 | 520 | 530 | 540 |
| AADLAKGNPA | SFARDYALSQ | ARYDFRWEDQ | FNLSIDPATA | KKLHDESLPG | KGGKTAHFCS |
| 550 | |||||
| MCGPKFCSMK | LSKALND |