Q1ZYR0
Gene name |
CLN5 |
Protein name |
Ceroid-lipofuscinosis neuronal protein 5 |
Names |
Beta-expansin-10, Pollen allergen Zea m 1c, ZmEXPB10, Protein CLN5 |
Species |
Bos taurus (Bovine) |
KEGG Pathway |
bta:529186 |
EC number |
3.1.2.22: Thiolester hydrolases |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q1ZYR0
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q1ZYR0-F1 | Predicted | AlphaFoldDB |
31 variants for Q1ZYR0
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| rs522787844 | 10 | G>W | No | EVA | |
| rs1117165403 | 39 | T>A | No | EVA | |
| rs471510989 | 63 | P>A | No | EVA | |
| rs432111413 | 70 | Q>K | No | EVA | |
| rs43700172 | 71 | A>G | No | EVA | |
| rs721447670 | 81 | P>S | No | EVA | |
| rs384665761 | 189 | G>V | No | EVA | |
| rs718685630 | 219 | R>S | No | EVA | |
| rs465225332 | 234 | V>M | No | EVA | |
| rs477328397 | 257 | R>M | No | EVA | |
| rs448695748 | 282 | T>P | No | EVA | |
| rs468882614 | 284 | A>V | No | EVA | |
| rs437376806 | 288 | K>T | No | EVA | |
| rs450960503 | 289 | K>N | No | EVA | |
| rs134435881 | 292 | Y>S | No | EVA | |
| rs432799152 | 293 | P>L | No | EVA | |
| rs447511070 | 294 | F>L | No | EVA | |
| rs455605650 | 302 | E>* | No | EVA | |
| rs475739760 | 304 | L>R | No | EVA | |
| rs471608555 | 305 | L>S | No | EVA | |
| rs457835153 | 305 | L>V | No | EVA | |
| rs479596385 | 312 | D>G | No | EVA | |
| rs459730579 | 312 | D>H | No | EVA | |
| rs448429684 | 317 | H>P | No | EVA | |
| rs462170646 | 318 | R>I | No | EVA | |
| rs482557949 | 327 | E>V | No | EVA | |
| rs451185461 | 331 | L>F | No | EVA | |
| rs464685470 | 335 | Y>C | No | EVA | |
| rs446554271 | 348 | P>A | No | EVA | |
| rs466696860 | 352 | N>D | No | EVA | |
| rs435162312 | 359 | L>Y | No | EVA |
1 associated diseases with Q1ZYR0
Without disease ID
No regional properties for Q1ZYR0
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for Q1ZYR0 | |||
Functions
| Description | ||
|---|---|---|
| EC Number | 3.1.2.22 | Thiolester hydrolases |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
8 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| Golgi apparatus | A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| lysosomal membrane | The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm. |
| lysosome | A small lytic vacuole that has cell cycle-independent morphology found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions. |
| perinuclear region of cytoplasm | Cytoplasm situated near, or occurring around, the nucleus. |
| vacuolar lumen | The volume enclosed within the vacuolar membrane. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| hydrolase activity, acting on glycosyl bonds | Catalysis of the hydrolysis of any glycosyl bond. |
| mannose binding | Binding to mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans. |
9 GO annotations of biological process
| Name | Definition |
|---|---|
| brain development | The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.). |
| glycosylation | The covalent attachment and further modification of carbohydrate residues to a substrate molecule. |
| lysosomal lumen acidification | Any process that reduces the pH of the lysosomal lumen, measured by the concentration of the hydrogen ion. |
| lysosome organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases. |
| neurogenesis | Generation of cells within the nervous system. |
| positive regulation of GTP binding | Any process that activates or increases the frequency, rate or extent of GTP binding. |
| retrograde transport, endosome to Golgi | The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport. |
| signal peptide processing | The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell. |
| visual perception | The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| O75503 | CLN5 | Ceroid-lipofuscinosis neuronal protein 5 | Homo sapiens (Human) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAQVGSAGPG | ACGRRGAGAG | AGPERTTWRW | APALLWLATA | AAVAGDPSRR | QWPVPYKRFS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| FRPEPDPYCQ | AKYTFCPTGS | PIPVMKDDDV | IEVFRLQAPV | WEFKYGDLLG | HLKIMHDAIG |
| 130 | 140 | 150 | 160 | 170 | 180 |
| FRSTLTEKNY | TMEWYELFQL | GNCTFPHLRP | EMNAPFWCNQ | GAACFFEGID | DSHWKENGTL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| VLVATISGGM | FNRMAKWVKQ | DNETGIYYET | WTVQASPERG | AERWFESYDC | SKFVLRTYEK |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LAELGADFKK | IETNYTRIFL | YSGEPTYLGN | ETSVFGPTGN | KTLALAIKKF | YYPFKPHLST |
| 310 | 320 | 330 | 340 | 350 | |
| KEFLLSLLQI | FDAVVIHREF | YLFYNFEYWF | LPMKYPFIKI | TYEEIPLPNR | KNRTLSGL |