Q1WV31
Gene name |
rpoE |
Protein name |
Probable DNA-directed RNA polymerase subunit delta |
Names |
RNAP delta factor |
Species |
Ligilactobacillus salivarius (strain UCC118) (Lactobacillus salivarius) |
KEGG Pathway |
lsl:LSL_0341 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q1WV31
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q1WV31-F1 | Predicted | AlphaFoldDB |
No variants for Q1WV31
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q1WV31 | |||||
No associated diseases with Q1WV31
1 regional properties for Q1WV31
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | ASXL, HARE-HTH domain | 14 - 81 | IPR007759 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| DNA-directed RNA polymerase complex | A protein complex that possesses DNA-directed RNA polymerase activity. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA-directed 5'-3' RNA polymerase activity | Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA-templated transcription | The synthesis of an RNA transcript from a DNA template. |
| regulation of DNA-templated transcription | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MELEKFKDAN | KDELSMIEVA | HEILHQRGET | MAFADLTNEI | QVYLGKSDEE | IRDRLAQFYT |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DLNIDGSFIS | LGDNVWGLRS | WYPYDSIDEA | LVHGEDEEDE | ERPRKKRKKV | NAFLADVSDD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DDVIDYDDDD | PEDEDLDNDY | DDEDDDDDEG | SHELKQYTKD | LDDIDDGDDP | EDELADGIEG |
| 190 | |||||
| QLTEFSDADL | DEENQD |