Q1GK93

PR
Gene name
ybeY
Protein name
Endoribonuclease YbeY
Names
Species
Ruegeria sp (strain TM1040) (Silicibacter sp)
KEGG Pathway
sit:TM1040_0190
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

34-117 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q1GK93

Entry ID Method Resolution Chain Position Source
AF-Q1GK93-F1 Predicted AlphaFoldDB

No variants for Q1GK93

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q1GK93

No associated diseases with Q1GK93

1 regional properties for Q1GK93

Type Name Position InterPro Accession
conserved_site Endoribonuclease YbeY, conserved site 128 - 138 IPR020549

Functions

Description
EC Number
Subcellular Localization
  • Cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

3 GO annotations of molecular function

Name Definition
endoribonuclease activity Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.
metalloendopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
zinc ion binding Binding to a zinc ion (Zn).

1 GO annotations of biological process

Name Definition
rRNA processing Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MILDVVIEDA RWDAAALEKQ AQEAVSATLA YLELEDEDWE VTVLGCDDAR IADLNAEFRE
70 80 90 100 110 120
KPKPTNVLSW PAQELAAAQD GGQPTPPEVD FMGDAALGDI AISYDTCVKE ANLAHKSRED
130 140 150 160
HVRHLLVHGT LHLLGYDHIR DGDATIMETL EVGILGKLGI PDPYIIEDGP