Q15QB4

PR
Gene name
lptD
Protein name
LPS-assembly protein LptD
Names
Species
Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)
KEGG Pathway
pat:Patl_3418
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

17-90 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q15QB4

Entry ID Method Resolution Chain Position Source
AF-Q15QB4-F1 Predicted AlphaFoldDB

No variants for Q15QB4

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q15QB4

No associated diseases with Q15QB4

2 regional properties for Q15QB4

Type Name Position InterPro Accession
domain Organic solvent tolerance-like, N-terminal 73 - 199 IPR005653
domain LptD, C-terminal 308 - 668 IPR007543

Functions

Description
EC Number
Subcellular Localization
  • Cell outer membrane
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cell outer membrane A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.

No GO annotations of molecular function

Name Definition
No GO annotations for molecular function

3 GO annotations of biological process

Name Definition
Gram-negative-bacterium-type cell outer membrane assembly The assembly of an outer membrane of the type formed in Gram-negative bacteria. This membrane is enriched in polysaccharide and protein, and the outer leaflet of the membrane contains specific lipopolysaccharide structures.
lipopolysaccharide transport The directed movement of lipopolysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A lipopolysaccharide is any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.
response to organic substance Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MKPLKLELNP RDFNHYQAAF LPYRMKIKQP LHVLCFSVCS LSAVAQETCP APANTFVVEK
70 80 90 100 110 120
RLPNGQIQVI SNMTSIQQDN FAEFEGDVEI TNKDSQIIAN KAQIDRTTQQ LIATGDVSYQ
130 140 150 160 170 180
NPQLSVTSQK VLLNTQNNRM EIADTQYELT TLNARGQAEL LVVDQTQGLE LNGVTFSTCP
190 200 210 220 230 240
TGQEDWLVHA DSITVKPDET RGVARNAFFY VQDIPIFYLP YYSFPVTDAR ETGLLFPQVG
250 260 270 280 290 300
SSSSTGFAYE QPYYLNLDPQ YDATITPRYM TKRGLQLKTE FRYLTENNSG QIDIEYLPND
310 320 330 340 350 360
SDSTTNEDRY FYRFTHKGAL SDDWEVNVDF NGLSDDNYIV DLGSDYYNSA DTHLFRTLGL
370 380 390 400 410 420
HYYSDALNVS LQLRDFEILG DHDDTYRALP ELKLDYVTDL PAGFKFDIHS ELARFDNANG
430 440 450 460 470 480
TSPKATRAHI APTLSLPLEN SWGEFLAETS IMHTVYRQED IEGTDLSRDV SRTLGQAKLY
490 500 510 520 530 540
GALVFERQAH WFGDNVTQTL EPRAQYLYTS YEDQSDIGLY DTTRLFNDFA GLFRGQEFTG
550 560 570 580 590 600
LDRISDKNQV TLGVTSRIID EDNREQFKLS LGQIFYLEDN KVTAASKEDD RSALAAELDW
610 620 630 640 650 660
RIGSKWLAHS EVQVSTQTDK VERSSVGLEY RLARDKMLQI NHRFVRDLSG EQISQLGLTA
670 680 690 700 710 720
SWPIAQDWYW VGRWYRDIDR HRTIESYTGL QYESCCWALR IVAQRQLTSR FDDDGLQSTD
730 740 750
EFDSGIAIQF LFKGIGGDSS GRDMLRDGLF GYRQPYLLD