Q12QI1
Gene name |
infB |
Protein name |
Translation initiation factor IF-2 |
Names |
|
Species |
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) |
KEGG Pathway |
sdn:Sden_1007 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q12QI1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q12QI1-F1 | Predicted | AlphaFoldDB |
No variants for Q12QI1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q12QI1 | |||||
No associated diseases with Q12QI1
6 regional properties for Q12QI1
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | MCM domain | 336 - 557 | IPR001208 |
| conserved_site | Mini-chromosome maintenance, conserved site | 456 - 464 | IPR018525 |
| domain | MCM N-terminal domain | 21 - 115 | IPR027925 |
| domain | MCM OB domain | 121 - 250 | IPR033762 |
| domain | Mcm6, C-terminal winged-helix domain | 710 - 796 | IPR041024 |
| domain | MCM, AAA-lid domain | 574 - 659 | IPR041562 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| GTP binding | Binding to GTP, guanosine triphosphate. |
| GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + H+ + phosphate. |
| translation initiation factor activity | Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide. |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MADTSVQKLA | AEVGKSVERL | IEQFSEAGLK | KGQADTVSET | EKQQLLDYLK | KQHGADKAPT |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KMTLQRKTVS | TLSVPAGGGQ | SKDVKVEVRK | KRTFVKRDDS | ELVDQAELEA | KAKAEADAKA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| AAEAKQKADA | EAQAKAAAEA | KAKAEANKAK | EKAPQAPAPK | PKAELKAETP | EAAAARAEAE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| RIKATQEAVL | TKKQKEEAAQ | AAEEAKKLAE | VNSKRWAEEE | RLRLEAEKNG | DHHVTTSKVA |
| 250 | 260 | 270 | 280 | 290 | 300 |
| RAAEDSSDMD | DEKRGRRARN | KPTNKKRGGK | DARDGREKHM | RNRSTAPQSM | AHGFNKPVAA |
| 310 | 320 | 330 | 340 | 350 | 360 |
| VSRDVRIGET | VSVAELAHLM | AVKATEIIKQ | MMKMGSMVTI | NQILDQETAQ | MVAEEMGHKV |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VLLRENELEE | QVLGDRDDNV | KLETRAPVVT | IMGHVDHGKT | SLLDYIRRAK | VAAGEAGGIT |
| 430 | 440 | 450 | 460 | 470 | 480 |
| QHIGAYHVET | DNGMITFLDT | PGHAAFTSMR | ARGAKATDIV | ILVVAADDGV | MPQTIEAIQH |
| 490 | 500 | 510 | 520 | 530 | 540 |
| AKAGNVPLIV | AVNKMDKPDA | DPERVKSELS | QHGVMSDDWG | GDNMFVHLSA | KTGEGVDELL |
| 550 | 560 | 570 | 580 | 590 | 600 |
| EGILLQSEVL | ELKAVREGMA | AGVVIESQLD | KGRGPVATVL | VQSGTLRQGD | IVLCGLMYGK |
| 610 | 620 | 630 | 640 | 650 | 660 |
| IRAMKDENGN | AITEAGPSIP | VEILGLSGVP | SAGDEATVVR | DERKAREVAL | YRQGKFRDVK |
| 670 | 680 | 690 | 700 | 710 | 720 |
| LARQQKSKLE | NMFANMEEGE | VQELNIVLKA | DVQGSLEAIC | DSLTGLSTAE | VKVNIIARGV |
| 730 | 740 | 750 | 760 | 770 | 780 |
| GALTETDATL | AAASNAIMVG | FNVRADAQAR | KTIEAESVDL | RYYSIIYNLI | DEVRAAMTGM |
| 790 | 800 | 810 | 820 | 830 | 840 |
| LAPEFKQQII | GLAEVRDVFK | SPKIGAIAGC | MVTEGIVKRS | APIRVLRDNV | VIYEGELESL |
| 850 | 860 | 870 | 880 | ||
| RRFKDDATEV | RNGMECGIGV | KNYNDVRVGD | QIEVFETIEV | ARTL |