Q12PR8

PR
Gene name
mltF
Protein name
Membrane-bound lytic murein transglycosylase F
Names
Murein lyase F
Species
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
KEGG Pathway
sdn:Sden_1272
EC number
4.2.2.n1: Acting on polysaccharides
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

104-182 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q12PR8

Entry ID Method Resolution Chain Position Source
AF-Q12PR8-F1 Predicted AlphaFoldDB

No variants for Q12PR8

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q12PR8

No associated diseases with Q12PR8

2 regional properties for Q12PR8

Type Name Position InterPro Accession
domain Solute-binding protein family 3/N-terminal domain of MltF 36 - 259 IPR001638
domain Transglycosylase SLT domain 1 290 - 386 IPR008258

Functions

Description
EC Number 4.2.2.n1 Acting on polysaccharides
Subcellular Localization
  • Cell outer membrane; Peripheral membrane protein
  • Attached to the inner leaflet of the outer membrane
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cell outer membrane A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.

2 GO annotations of molecular function

Name Definition
carbon-oxygen lyase activity, acting on polysaccharides Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a polysaccharide.
lytic transglycosylase activity Catalysis of the specific cleavage of the beta-(1->4) glycosidic linkage between N-acetylmuramyl and N-acetylglucosaminyl residues in peptidoglycan, with the concomitant formation of 1,6-anhydro-N-acetylmuramyl residues.

2 GO annotations of biological process

Name Definition
cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.
cell wall organization A process that results in the assembly, arrangement of constituent parts, or disassembly of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MIKYLYVILL GLLLSGCQPA EVVEIEASPK AQKRTVLKVG TLYGPQIYVN NSQGETGFDY
70 80 90 100 110 120
EMANRFADYL GVSLEMIPFT DRKQLFKALK DNDIDIIAAG IAKTPGRGEQ FKMGPTLYKV
130 140 150 160 170 180
NQVLVYREGT PEPKDIGTLS GEITVMSNSS SVNTLTQLQK DYPELLWNQV NDKDNEELFA
190 200 210 220 230 240
LIAKGELNYT ISDSNSLLIN QRFLPELRAG MILEEKIEVV WLLPPKNSDK LMSQLLAFWH
250 260 270 280 290 300
NEQRAGTLEH LNEKYFGHVK RFDYVDTRAF IRAIDNVLPA YRSLFETYSG ELDWRKLAAA
310 320 330 340 350 360
SYQESHWNPN ARSKTGVRGM MMLTQPTASY VGVSDRTDAE QSIRGGAIYL KDMIERLPES
370 380 390 400 410 420
ISDSQRIWFA LAAYNIGMGH VEDARRLAVS MDMDPDAWRD VKKVLPLLQQ RKYYKQTRYG
430 440 450 460 470 480
YARGSQAVHY VDSIRRYYDT LVWVDNQTKK MEVIEAPVEI LADKVDANDN IKQSLASDSK
490
TNNTLKPKLG AGQP