Q12PE6
Gene name |
tolB |
Protein name |
Tol-Pal system protein TolB |
Names |
|
Species |
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) |
KEGG Pathway |
sdn:Sden_1394 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q12PE6
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q12PE6-F1 | Predicted | AlphaFoldDB |
No variants for Q12PE6
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q12PE6 | |||||
No associated diseases with Q12PE6
5 regional properties for Q12PE6
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | TolB, N-terminal | 23 - 126 | IPR007195 |
| repeat | WD40-like beta propeller | 208 - 240 | IPR011659-1 |
| repeat | WD40-like beta propeller | 251 - 284 | IPR011659-2 |
| repeat | WD40-like beta propeller | 293 - 327 | IPR011659-3 |
| repeat | WD40-like beta propeller | 338 - 370 | IPR011659-4 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| periplasmic space | The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria). |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| cell cycle | The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. |
| cell division | The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. |
| protein import | The targeting and directed movement of proteins into a cell or organelle. Not all import involves an initial targeting event. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKILAKWLTL | ATLMLTAQVN | AALDIVITEG | VDAARPIAVV | PFVWEGPGAA | PQQISDIVMG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| DLSRSGTFKP | LDIRALPQHG | ISSVAQFAAA | SWGKVGAEAV | VMGSIKPYGV | DQFLVNFELI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| DLVRAQSQAL | KGPQNNTELV | LESRQTVISA | NQFRQYGHRI | SDIVYEKLTG | IRGAFLTRTA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| YVVVKQGQKA | PYHLMIADYD | GYNEQMLLRS | PEPLMSPTWS | PDGRRLAYVS | FENRKAEIFV |
| 250 | 260 | 270 | 280 | 290 | 300 |
| QDIYSQTRTL | VSSYPGINGA | PSFSPDGKKL | AVTLSKDGQP | EVYVIDIATK | AAKRITDHYS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| IDTEPSWYPD | GKSLLFTSER | GGKPQIYSVH | LDTGKVSRVT | FEGEWNLGGS | ITPDGRSMIF |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VNRTNGKFHI | ARMDLATRFL | QVLSSTQLDE | SPSVAPNGTM | VIYGTTHQGK | QVLAAVSMDG |
| 430 | 440 | ||||
| RFKARLPVGQ | GEVKSPAWSP | FL |