Q12797
Gene name |
ASPH (BAH) |
Protein name |
Aspartyl/asparaginyl beta-hydroxylase |
Names |
Aspartate beta-hydroxylase, ASP beta-hydroxylase, Peptide-aspartate beta-dioxygenase |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:444 |
EC number |
1.14.11.16: With 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
27 structures for Q12797
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 5APA | X-ray | 205 A | A | 562-758 | PDB |
| 5JQY | X-ray | 199 A | A | 330-758 | PDB |
| 5JTC | X-ray | 224 A | A | 330-758 | PDB |
| 5JZ6 | X-ray | 235 A | A | 330-758 | PDB |
| 5JZ8 | X-ray | 210 A | A | 330-758 | PDB |
| 5JZA | X-ray | 214 A | A | 330-758 | PDB |
| 5JZU | X-ray | 250 A | A | 330-758 | PDB |
| 6Q9F | X-ray | 163 A | A | 330-758 | PDB |
| 6Q9I | X-ray | 185 A | A | 330-758 | PDB |
| 6QA5 | X-ray | 265 A | A | 330-758 | PDB |
| 6RK9 | X-ray | 229 A | A/B | 330-758 | PDB |
| 6YYU | X-ray | 211 A | A | 330-758 | PDB |
| 6YYV | X-ray | 177 A | A | 330-758 | PDB |
| 6YYW | X-ray | 227 A | A | 330-758 | PDB |
| 6YYX | X-ray | 153 A | A | 330-758 | PDB |
| 6YYY | X-ray | 229 A | A | 330-758 | PDB |
| 6Z6Q | X-ray | 181 A | A | 330-758 | PDB |
| 6Z6R | X-ray | 213 A | A | 330-758 | PDB |
| 7BMI | X-ray | 166 A | A | 330-758 | PDB |
| 7BMJ | X-ray | 175 A | A/C | 330-758 | PDB |
| 7E6J | X-ray | 190 A | A | 330-758 | PDB |
| 7YB8 | X-ray | 198 A | A | 330-758 | PDB |
| 7YB9 | X-ray | 154 A | A | 329-758 | PDB |
| 7YBA | X-ray | 186 A | A | 330-758 | PDB |
| 7YBB | X-ray | 168 A | A | 330-758 | PDB |
| 7YBC | X-ray | 184 A | A | 330-758 | PDB |
| AF-Q12797-F1 | Predicted | AlphaFoldDB |
640 variants for Q12797
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA371329328 RCV000761586 rs1563580963 |
57 | W>* | Facial dysmorphism-lens dislocation-anterior segment abnormalities-spontaneous filtering blebs syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs879255574 RCV000125463 |
618 | N>missing | Facial dysmorphism-lens dislocation-anterior segment abnormalities-spontaneous filtering blebs syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA4761483 VAR_071821 COSM1100938 rs374385878 RCV000125464 |
735 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium Facial dysmorphism-lens dislocation-anterior segment abnormalities-spontaneous filtering blebs syndrome FDLAB [NCI-TCGA, Cosmic, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA371323563 rs1156856315 |
4 | R>C | No |
ClinGen gnomAD |
|
|
rs1472259132 CA371323553 |
5 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs1472259132 CA371323555 |
5 | K>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs1269670385 CA371323526 |
6 | N>K | No |
ClinGen gnomAD |
|
|
CA178334298 rs960037266 |
7 | A>T | No |
ClinGen TOPMed |
|
| TCGA novel | 7 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1201733540 CA371323472 |
8 | K>R | No |
ClinGen gnomAD |
|
|
CA4762587 rs539978373 |
9 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4762588 rs539978373 |
9 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA178334260 rs979705559 |
12 | N>S | No |
ClinGen Ensembl |
|
|
CA371323283 rs1487055560 |
14 | S>N | No |
ClinGen gnomAD |
|
|
CA4762584 rs747090114 |
16 | S>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4762585 rs755173683 |
16 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371323131 rs1328944258 |
19 | G>C | No |
ClinGen gnomAD |
|
|
rs11541430 CA178334214 |
20 | S>T | No |
ClinGen Ensembl |
|
|
rs572462553 CA178334212 |
21 | G>D | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
rs1322483666 CA371323093 |
21 | G>R | No |
ClinGen gnomAD |
|
|
rs1322483666 CA371323097 |
21 | G>S | No |
ClinGen gnomAD |
|
|
rs572462553 CA371323080 |
21 | G>V | No |
ClinGen 1000Genomes TOPMed gnomAD |
|
|
CA371323048 rs1390549756 |
22 | S>T | No |
ClinGen gnomAD |
|
|
CA371323012 rs1318355055 |
23 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1318355055 CA371323014 |
23 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA371323025 rs1488281920 |
23 | T>S | No |
ClinGen TOPMed |
|
|
CA371322983 rs1455503951 |
24 | S>R | No |
ClinGen TOPMed |
|
|
rs1429945749 CA371322971 |
25 | A>V | No |
ClinGen gnomAD |
|
|
rs1019837641 CA371322957 |
26 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1019837641 CA178334177 |
26 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1430579211 CA371322933 |
27 | S>R | No |
ClinGen gnomAD |
|
|
rs758712450 CA4762580 |
27 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371322818 rs1201612921 |
31 | G>E | No |
ClinGen gnomAD |
|
|
CA371322834 rs1265564823 |
31 | G>R | No |
ClinGen gnomAD |
|
|
CA371322806 rs1329239557 |
32 | A>D | No |
ClinGen TOPMed gnomAD |
|
|
CA371322811 rs1342260234 |
32 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1329239557 CA371322804 |
32 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA371322800 rs1288784411 |
33 | R>G | No |
ClinGen TOPMed |
|
|
rs1227680182 CA371322786 |
33 | R>L | No |
ClinGen gnomAD |
|
|
CA371322797 rs1288784411 |
33 | R>W | No |
ClinGen TOPMed |
|
|
rs1029237560 CA178334137 |
34 | R>I | No |
ClinGen TOPMed |
|
|
rs1295077864 CA371322763 |
35 | E>K | No |
ClinGen gnomAD |
|
|
rs1589162319 CA371329469 |
35 | E>V | No |
ClinGen Ensembl |
|
|
rs1224231481 CA371329454 |
37 | K>N | No |
ClinGen gnomAD |
|
|
rs762430211 CA4762541 |
38 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750156526 CA4762540 |
42 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs201019731 CA4762539 |
43 | N>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs776880681 CA4762537 |
44 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769099285 CA4762536 |
45 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs1214690073 CA371329396 |
46 | K>T | No |
ClinGen TOPMed |
|
|
CA4762535 rs761300932 |
47 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA4762533 rs772339597 |
48 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1202877763 COSM193750 CA371329387 |
48 | G>R | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA4762532 rs745933402 |
49 | L>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 51 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371329365 rs1248380221 |
52 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1464742802 CA371329355 |
53 | S>* | No |
ClinGen TOPMed |
|
|
CA178358571 rs78393038 |
54 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1210394578 CA371329345 |
55 | F>L | No |
ClinGen gnomAD |
|
|
rs149440176 CA4762529 |
56 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA gnomAD |
|
CA4762530 rs771075546 |
56 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs779961202 CA4762526 |
59 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs779961202 CA4762525 |
59 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs371692559 CA178358532 |
60 | V>L | No |
ClinGen Ensembl |
|
|
CA371329301 rs1241929093 |
61 | I>T | No |
ClinGen gnomAD |
|
|
CA4762521 rs761398964 |
66 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA178358490 rs775335939 |
66 | V>I | No |
ClinGen gnomAD |
|
|
rs764599709 CA4762519 |
67 | W>* | No |
ClinGen ExAC gnomAD |
|
|
CA178358454 rs939966414 |
67 | W>G | No |
ClinGen TOPMed |
|
|
rs776209404 CA4762517 |
71 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA371329232 rs1390431979 |
73 | V>A | No |
ClinGen gnomAD |
|
|
CA4762514 COSM1597732 COSM1100949 COSM1597733 rs774320459 |
73 | V>I | Variant assessed as Somatic; 9.24e-05 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA4762515 rs774320459 |
73 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs138023523 CA4762511 |
77 | L>P | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4762512 rs143476476 |
77 | L>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs370627722 CA178358396 |
78 | V>G | No |
ClinGen ESP |
|
|
rs768498732 CA4762510 |
80 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4762509 rs746810996 |
82 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs779765042 CA4762508 |
83 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1209544826 CA371329160 |
84 | L>V | No |
ClinGen gnomAD |
|
|
CA371329022 rs1342368808 |
86 | K>R | No |
ClinGen gnomAD |
|
|
CA4762444 rs780504282 |
90 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371328999 rs1563560726 |
90 | Y>H | No |
ClinGen Ensembl |
|
|
CA178355462 rs559826777 |
91 | D>V | No |
ClinGen Ensembl |
|
| TCGA novel | 93 | D>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371328972 rs1344023344 |
94 | G>S | No |
ClinGen gnomAD |
|
|
rs1448546126 CA371328943 |
98 | F>I | No |
ClinGen TOPMed |
|
| TCGA novel | 98 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4762443 rs768375086 |
98 | F>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1341029164 CA371328933 |
99 | D>G | No |
ClinGen gnomAD |
|
|
rs1336198288 CA371328923 |
101 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs746601152 CA4762442 |
104 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371328887 rs1375001031 |
106 | L>V | No |
ClinGen gnomAD |
|
|
rs577511653 CA4762287 |
109 | L>H | No |
ClinGen 1000Genomes ExAC |
|
|
CA4762288 rs756490083 |
109 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs759903134 CA4762285 |
111 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs1342991534 CA371326770 |
114 | T>I | No |
ClinGen gnomAD |
|
|
CA371326771 rs1342991534 |
114 | T>N | No |
ClinGen gnomAD |
|
|
CA371326774 rs1322738302 |
114 | T>P | No |
ClinGen gnomAD |
|
|
rs1317176698 CA371326764 |
115 | S>L | No |
ClinGen gnomAD |
|
|
rs1434999629 CA371326759 |
116 | E>G | No |
ClinGen gnomAD |
|
|
CA371326755 rs751664216 |
117 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA4762284 rs751664216 |
117 | P>T | No |
ClinGen ExAC gnomAD |
|
|
rs773407540 CA4762281 |
120 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs775085975 CA4762278 |
121 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745753269 CA4762276 |
122 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1025081868 CA178332655 |
123 | E>A | No |
ClinGen Ensembl |
|
| TCGA novel | 127 | H>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371326691 rs1210628511 |
127 | H>P | No |
ClinGen gnomAD |
|
|
rs543625862 CA4762274 |
128 | T>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4762272 rs777565690 |
131 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371326656 rs1310778002 |
132 | E>G | No |
ClinGen gnomAD |
|
|
rs1376919890 CA371326660 |
132 | E>Q | No |
ClinGen gnomAD |
|
|
rs374279734 CA4762269 |
133 | Q>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs139677107 CA4762268 |
134 | V>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs767124655 CA4762267 |
136 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs1225787380 CA371326484 |
140 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1225787380 CA371326485 |
140 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA4762250 rs368498847 |
143 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs758840739 CA4762248 |
144 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 147 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1370265187 CA371326433 COSM1457769 |
147 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA178330856 rs886249453 |
149 | E>G | No |
ClinGen Ensembl |
|
|
rs1057382346 CA178330852 |
151 | I>M | No |
ClinGen Ensembl |
|
|
rs991388933 CA178330850 |
152 | Q>E | No |
ClinGen TOPMed gnomAD |
|
|
CA371326387 rs1216160002 |
154 | L>H | No |
ClinGen gnomAD |
|
|
CA371326385 rs1216160002 |
154 | L>R | No |
ClinGen gnomAD |
|
|
rs778800339 CA178330842 |
156 | H>Q | No |
ClinGen Ensembl |
|
|
CA371326374 rs1435902631 |
156 | H>R | No |
ClinGen TOPMed |
|
|
rs757538868 CA4762245 |
158 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1336269281 CA371326363 |
158 | M>V | No |
ClinGen gnomAD |
|
|
COSM1100948 CA4762244 rs767403241 |
159 | V>I | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA4762243 rs767403241 |
159 | V>L | No |
ClinGen ExAC gnomAD |
|
|
COSM1166092 rs77752382 CA4762241 |
161 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
| TCGA novel | 161 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA178330817 rs1044501751 |
162 | E>D | No |
ClinGen Ensembl |
|
|
CA371325502 rs1274178472 |
164 | V>A | No |
ClinGen gnomAD |
|
|
rs773005532 CA371325458 |
166 | G>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764862417 CA4762212 |
166 | G>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773005532 CA4762213 |
166 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs764862417 CA178327523 |
166 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1293560634 CA371325436 |
167 | E>K | No |
ClinGen gnomAD |
|
|
rs1399578745 CA371325418 |
167 | E>V | No |
ClinGen gnomAD |
|
|
rs1376304095 CA371325401 |
168 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1376304095 CA371325407 |
168 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA4762211 rs761231039 |
169 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA371325350 rs1437992235 |
170 | Q>E | No |
ClinGen TOPMed |
|
|
CA371325339 rs1588604485 |
170 | Q>L | No |
ClinGen Ensembl |
|
|
CA4762210 rs200220407 |
171 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4762208 rs746620978 |
172 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371325286 rs1168978691 |
172 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA371325292 rs1168978691 |
172 | E>Q | No |
ClinGen TOPMed gnomAD |
|
|
RCV000484490 rs80163539 |
173 | D>missing | No |
ClinVar dbSNP |
|
|
CA371325192 rs1228104787 |
175 | P>R | No |
ClinGen TOPMed |
|
|
CA371325168 rs1374256928 |
176 | T>I | No |
ClinGen gnomAD |
|
|
CA4762205 rs3765163 |
177 | G>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs913971218 CA178327462 |
178 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA4762204 rs746430806 |
179 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371325096 rs1588603713 |
179 | P>S | No |
ClinGen Ensembl |
|
|
CA4762203 rs370193581 |
180 | Q>* | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 181 | Q>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4762201 rs551740989 |
181 | Q>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA178327440 rs551740989 |
181 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4762198 rs373501060 |
183 | D>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4762199 rs756436526 |
183 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA371324956 rs1563366794 |
184 | D>E | No |
ClinGen Ensembl |
|
|
CA371324951 rs1243759810 |
185 | E>K | No |
ClinGen TOPMed |
|
|
rs758257075 CA4762195 |
186 | F>L | No |
ClinGen ExAC gnomAD |
|
|
COSM3736470 CA4762193 rs143851903 |
188 | M>T | skin [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA4762194 rs750444872 |
188 | M>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs143436295 CA4762192 COSM1183789 |
189 | A>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs760369329 CA4762189 |
190 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1163701116 CA371324825 |
191 | D>H | No |
ClinGen TOPMed |
|
|
rs772490513 CA4762187 |
191 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs1417292982 CA371324793 |
192 | V>A | No |
ClinGen TOPMed |
|
|
CA178327343 rs372662604 |
192 | V>I | No |
ClinGen ESP |
|
|
CA178327336 rs1056174161 |
194 | D>N | No |
ClinGen Ensembl |
|
|
rs749764771 CA4762183 |
200 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA371324643 rs1166606139 |
201 | P>A | No |
ClinGen gnomAD |
|
|
CA371324639 rs1166606139 |
201 | P>S | No |
ClinGen gnomAD |
|
|
CA371324620 rs1474039206 |
202 | E>* | No |
ClinGen gnomAD |
|
|
CA178327296 rs1024887756 |
203 | V>A | No |
ClinGen TOPMed |
|
|
rs1248317915 CA371324586 |
204 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA178327294 rs991765865 |
204 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
CA371324263 rs1275766350 |
207 | E>D | No |
ClinGen TOPMed |
|
|
CA371324540 rs1247046948 |
207 | E>K | No |
ClinGen TOPMed |
|
|
rs748247014 CA4762155 |
208 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA4762152 rs778618542 |
209 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs201124803 CA4762153 COSM1100946 |
209 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA4762151 rs778618542 |
209 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4762150 rs757059899 |
210 | H>D | No |
ClinGen ExAC gnomAD |
|
|
CA4762149 rs749287680 |
210 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752226869 CA178326051 |
214 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752226869 CA4762146 |
214 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4762144 rs117730298 |
216 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA178326040 rs764808468 |
217 | T>I | No |
ClinGen Ensembl |
|
|
rs780617071 CA4762128 |
219 | S>L | No |
ClinGen ExAC gnomAD |
|
|
CA4762127 rs754501113 |
220 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA371322603 rs1273029835 |
221 | D>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA371322551 rs1358083484 |
223 | N>H | No |
ClinGen TOPMed |
|
|
CA4762126 rs751239592 |
224 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs747996627 CA178325563 |
225 | D>N | No |
ClinGen Ensembl |
|
|
rs766064099 CA4762125 |
226 | M>I | No |
ClinGen ExAC gnomAD |
|
|
rs1337861965 CA371322476 |
226 | M>V | No |
ClinGen gnomAD |
|
|
rs983353116 CA178325557 |
228 | E>G | No |
ClinGen gnomAD |
|
|
rs757932875 CA4762124 |
228 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA371322328 rs1357096438 |
229 | M>V | No |
ClinGen gnomAD |
|
|
CA371322316 rs1447122556 |
230 | M>K | No |
ClinGen gnomAD |
|
|
rs1300886728 CA371322319 |
230 | M>V | No |
ClinGen gnomAD |
|
|
rs1243331944 CA371322305 |
232 | E>K | No |
ClinGen TOPMed |
|
|
rs750845094 CA4762123 |
232 | E>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 233 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4762122 rs762456223 |
236 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA4762121 rs762456223 |
236 | P>T | No |
ClinGen ExAC gnomAD |
|
|
CA371322100 rs1213774386 |
239 | S>N | No |
ClinGen gnomAD |
|
|
CA371321980 rs1489214050 |
240 | E>G | No |
ClinGen gnomAD |
|
|
CA4762104 rs757690793 |
242 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs757690793 CA4762103 |
242 | V>E | No |
ClinGen ExAC gnomAD |
|
|
CA4762105 rs750074460 |
242 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs76076022 CA178325216 |
244 | E>* | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs78130457 CA178325212 |
244 | E>A | No |
ClinGen Ensembl |
|
|
CA4762100 CA4762101 rs138586020 |
244 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4762102 rs76076022 |
244 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs79779124 CA371321890 |
245 | D>G | No |
ClinGen gnomAD |
|
|
rs79779124 CA178325207 |
245 | D>V | No |
ClinGen gnomAD |
|
|
CA371321901 rs1237803655 |
245 | D>Y | No |
ClinGen gnomAD |
|
|
CA371321872 rs1407464239 |
246 | E>D | No |
ClinGen TOPMed |
|
|
CA4762099 rs373896228 |
247 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs866667898 CA178325204 |
249 | H>Y | No |
ClinGen Ensembl |
|
|
CA371321834 rs1344945334 |
250 | H>Q | No |
ClinGen TOPMed |
|
|
CA178325197 rs767463504 |
252 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150141171 CA4762097 |
252 | T>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1457767 CA4762098 rs767463504 |
252 | T>S | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA371321798 rs1451930508 |
253 | D>N | No |
ClinGen TOPMed |
|
|
rs1340354882 CA371321644 |
254 | D>E | No |
ClinGen TOPMed |
|
|
CA4762071 rs141764975 |
254 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4762070 rs776524870 |
254 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs1375377728 CA371321633 |
255 | V>E | No |
ClinGen gnomAD |
|
|
CA371321593 rs1283502249 |
257 | Y>* | No |
ClinGen TOPMed gnomAD |
|
|
rs200715677 CA4762069 |
258 | Q>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1208418451 CA371321560 |
259 | V>G | No |
ClinGen TOPMed |
|
|
CA4762067 rs775282497 |
261 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1280832138 CA371321506 |
262 | E>* | No |
ClinGen gnomAD |
|
|
CA371321464 rs1342815092 |
263 | Q>E | No |
ClinGen gnomAD |
|
|
CA4762007 rs765389479 |
265 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs752570668 CA4762005 |
269 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1488054790 CA371328799 |
272 | E>D | No |
ClinGen TOPMed |
|
|
rs767388835 CA4762004 |
272 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA4762002 rs751530262 |
274 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765981950 CA4762001 |
275 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA4761983 rs766243478 |
278 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1477784606 CA371328247 |
279 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA371328244 rs1477784606 CA371328243 |
279 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
RCV001700499 RCV000891278 CA4761981 rs141197241 |
282 | P>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4761980 rs764777027 |
286 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs372802079 CA4761979 |
287 | P>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1314472672 CA371328128 |
288 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
rs146557853 CA4761978 |
288 | V>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4761977 rs146557853 |
288 | V>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4761976 rs181711913 |
290 | D>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1280039637 CA371328114 |
290 | D>V | No |
ClinGen gnomAD |
|
|
CA371328106 rs1343740546 |
291 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
rs369553877 CA178364432 |
295 | V>I | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs775872876 CA4761975 |
296 | E>D | No |
ClinGen ExAC gnomAD |
|
|
CA371328072 rs1297382015 |
297 | E>K | No |
ClinGen gnomAD |
|
|
CA4761956 rs111708484 |
299 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4761955 rs759761612 |
300 | I>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 302 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1456120217 CA371328017 |
303 | V>M | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 304 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1368454037 CA371327991 |
306 | Q>R | No |
ClinGen TOPMed |
|
|
CA4761953 rs145686333 |
308 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4761954 rs182264222 |
308 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 309 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA178348414 rs1006478162 |
312 | E>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1482958594 CA371326595 |
313 | T>A | No |
ClinGen gnomAD |
|
|
CA371326587 rs1176988130 |
314 | N>S | No |
ClinGen TOPMed |
|
|
CA371326559 rs1179229336 |
318 | D>G | No |
ClinGen gnomAD |
|
|
rs765485026 CA4761914 |
318 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs765485026 CA4761915 |
318 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA4761913 rs762085250 |
319 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761912 rs148968174 |
320 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4761911 rs768753093 |
323 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1292387106 CA371326520 |
324 | A>T | No |
ClinGen gnomAD |
|
|
rs559324203 CA4761910 |
324 | A>V | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 325 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs769599231 CA4761882 |
326 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1181208678 CA371319643 |
328 | K>I | No |
ClinGen TOPMed gnomAD |
|
|
rs145790464 CA4761881 |
331 | P>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs776295942 CA4761880 |
331 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs145790464 CA371319578 |
331 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs145790464 CA178322253 |
331 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4761879 rs768203767 |
332 | K>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 336 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs746450205 CA4761878 COSM1457764 |
337 | F>L | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 338 | D>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs779702306 CA4761877 |
339 | K>R | No |
ClinGen ExAC |
|
|
CA371319418 rs1312924223 |
341 | I>V | No |
ClinGen gnomAD |
|
| TCGA novel | 343 | A>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371319269 rs1322872821 |
349 | E>K | No |
ClinGen gnomAD |
|
|
CA371319244 rs1333564353 |
350 | K>E | No |
ClinGen gnomAD |
|
|
CA4761873 rs760475788 |
350 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761872 rs754168774 |
351 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA4761870 rs151110168 |
352 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs540413249 CA4761868 |
352 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4761869 rs151110168 |
352 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA371319171 rs1183566739 |
353 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA371319141 rs6995412 |
354 | R>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4761867 VAR_053781 rs6995412 |
354 | R>M | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1408287251 CA371319131 |
354 | R>S | No |
ClinGen TOPMed |
|
|
CA178322171 rs748798273 |
354 | R>W | No |
ClinGen Ensembl |
|
|
rs1587489793 CA371317388 |
355 | G>V | No |
ClinGen Ensembl |
|
|
CA4761850 rs548801422 |
356 | K>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs756519559 CA4761849 |
356 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752884992 CA4761848 |
357 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761846 rs767756058 |
361 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA371317266 rs755000935 |
363 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs755000935 CA4761845 |
363 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139441811 CA4761844 |
369 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs761647989 CA4761842 |
369 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139441811 CA4761843 |
369 | R>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA581983231 rs1178962355 |
370 | K>* | No |
ClinGen TOPMed |
|
|
rs776684832 CA4761841 |
371 | Y>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs760581343 CA4761839 |
372 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs771867550 COSM1100944 CA4761837 |
373 | Q>H | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC |
|
rs775237436 CA4761838 |
373 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA371316976 rs1426858315 |
376 | R>* | No |
ClinGen gnomAD |
|
|
rs773731675 CA4761836 |
376 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773731675 CA4761835 |
376 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA178316885 rs1010774228 COSM1457763 |
377 | A>T | large_intestine [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA371316908 rs1203360840 |
380 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA371316865 rs111548396 |
382 | A>P | No |
ClinGen gnomAD |
|
|
CA178316881 rs111548396 |
382 | A>T | No |
ClinGen gnomAD |
|
|
CA4761833 rs749737562 |
382 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1238761523 CA371325914 |
386 | D>G | No |
ClinGen TOPMed |
|
|
CA4761815 rs762556445 |
392 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1249985871 CA371325811 |
392 | R>W | No |
ClinGen gnomAD |
|
|
rs557967736 CA178358556 |
394 | S>N | No |
ClinGen 1000Genomes |
|
|
CA371325745 rs1317845440 |
395 | N>K | No |
ClinGen gnomAD |
|
|
CA4761813 rs773541480 |
396 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761812 rs770298060 |
397 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs748442160 CA4761811 |
399 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761810 rs539672078 |
399 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA371325678 rs1398291954 |
400 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1398291954 CA371325680 |
400 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA4761809 rs769063033 |
402 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA4761808 rs368575612 |
403 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371325614 rs1165452346 |
404 | T>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA4761807 rs780357987 |
404 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA178358493 rs780357987 |
404 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1442828484 CA371325605 |
405 | Y>C | No |
ClinGen gnomAD |
|
|
CA371325594 rs758365723 |
406 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs758365723 CA4761806 |
406 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750531818 CA4761805 |
406 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA4761804 rs777790350 |
407 | E>D | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 408 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1369189748 CA371325526 |
410 | S>R | No |
ClinGen TOPMed |
|
|
CA371325488 rs1277023389 |
412 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1357551091 CA371325498 |
412 | P>S | No |
ClinGen gnomAD |
|
|
rs752742273 CA4761802 |
413 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA4761801 rs549970977 |
416 | A>E | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA371325342 rs1305520761 |
420 | K>T | No |
ClinGen TOPMed |
|
|
rs751131305 CA4761799 RCV000597816 |
425 | R>C | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs751131305 CA371325238 |
425 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761798 rs571146931 |
425 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs147012895 CA4761797 |
426 | R>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs772711048 CA4761796 |
426 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1050081952 CA178358434 |
427 | S>L | No |
ClinGen TOPMed |
|
|
CA4761795 rs764791495 |
428 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA371325160 rs1489541919 |
429 | R>K | No |
ClinGen TOPMed |
|
|
CA371325124 rs1587292512 |
430 | Q>H | No |
ClinGen Ensembl |
|
|
rs777168135 CA371325130 |
430 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761793 rs777168135 |
430 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 433 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201951517 CA4761792 |
433 | L>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs148640329 CA4761767 |
437 | R>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs576597404 CA4761763 |
441 | L>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs576597404 CA371323297 |
441 | L>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4761761 rs781217888 |
446 | L>* | No |
ClinGen ExAC gnomAD |
|
|
rs749400974 CA4761762 |
446 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA4761758 rs779882721 |
451 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 452 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4761757 rs758171923 |
452 | N>H | No |
ClinGen ExAC gnomAD |
|
|
rs144001445 CA178354669 |
452 | N>S | No |
ClinGen ESP |
|
|
CA4761756 rs750042785 |
453 | D>G | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 453 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4761755 rs764895496 |
454 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA371322948 rs1188758883 |
454 | T>I | No |
ClinGen gnomAD |
|
|
rs1474713752 CA371322894 |
457 | K>R | No |
ClinGen gnomAD |
|
|
rs756703473 CA4761754 |
458 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs1177242418 CA371322830 |
459 | D>E | No |
ClinGen gnomAD |
|
|
rs1187371040 CA371322836 |
459 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 459 | D>Y | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200072789 CA4761752 |
462 | V>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs200072789 CA4761751 |
462 | V>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA371322752 rs1201419884 |
463 | G>V | No |
ClinGen gnomAD |
|
|
CA4761750 rs753194439 |
465 | L>P | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 467 | I>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4761748 rs149515549 |
467 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
RCV000888116 rs61731238 CA4761747 |
468 | G>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA4761744 rs538536484 |
471 | D>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4761746 rs372194017 |
471 | D>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs538536484 CA4761745 |
471 | D>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA371322636 rs1489756615 |
472 | N>I | No |
ClinGen TOPMed |
|
|
rs1334924913 CA371322615 |
473 | A>G | No |
ClinGen gnomAD |
|
|
CA4761743 rs769819321 |
475 | K>T | No |
ClinGen ExAC |
|
|
rs1355407884 CA371322561 |
476 | V>A | No |
ClinGen gnomAD |
|
|
CA371322566 rs1452225977 |
476 | V>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1452225977 CA371322571 |
476 | V>I | No |
ClinGen TOPMed gnomAD |
|
|
CA4761741 rs779893472 |
478 | E>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761740 rs571486771 |
478 | E>D | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA371322496 rs779893472 |
478 | E>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371322463 rs1390425640 |
479 | E>D | No |
ClinGen TOPMed |
|
| TCGA novel | 480 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA178348848 rs745877416 |
485 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745877416 CA4761717 |
485 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761713 rs748940434 |
493 | H>L | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 493 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777323994 CA4761712 |
494 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA371321261 rs1309363471 |
496 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA371321259 rs1309363471 |
496 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
rs955355129 CA178348732 |
498 | L>R | No |
ClinGen gnomAD |
|
|
rs1372971152 CA371321187 |
500 | A>T | No |
ClinGen gnomAD |
|
|
rs781673885 CA4761709 |
501 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA371321141 rs1428961785 |
502 | N>Y | No |
ClinGen TOPMed |
|
|
rs755536762 CA4761708 |
503 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs752169931 CA4761707 |
504 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752169931 CA371321096 |
504 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761706 rs374278137 |
505 | A>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs374278137 CA178348699 |
505 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA371321088 rs1456947038 |
505 | A>T | No |
ClinGen gnomAD |
|
|
rs369603667 CA4761704 |
506 | E>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 507 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA371320998 rs1481320388 |
509 | P>L | No |
ClinGen gnomAD |
|
|
rs1355776825 CA371320984 |
510 | Y>C | No |
ClinGen TOPMed |
|
|
CA178346486 rs865991153 |
517 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
COSM1457761 CA178346466 rs1055400004 |
518 | G>R | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs757411104 CA4761685 |
520 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA4761686 rs757411104 |
520 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA4761684 rs754141735 |
521 | G>C | No |
ClinGen ExAC gnomAD |
|
|
CA178346429 rs1001095894 |
522 | T>I | No |
ClinGen Ensembl |
|
|
rs769168879 CA178346409 |
524 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs369044816 CA4761682 |
524 | D>H | No |
ClinGen ESP ExAC gnomAD |
|
|
CA4761683 rs369044816 |
524 | D>N | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1408505701 CA371320452 |
525 | G>R | No |
ClinGen TOPMed |
|
|
rs774225355 CA4761681 |
526 | R>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761680 rs766318594 |
528 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs762740715 COSM3669933 CA4761679 |
529 | F>L | liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA371320363 rs1335814935 |
530 | H>N | No |
ClinGen TOPMed |
|
|
rs747733029 CA4761676 |
532 | G>E | No |
ClinGen ExAC gnomAD |
|
|
CA371320316 rs1448888805 |
533 | D>N | No |
ClinGen gnomAD |
|
|
rs776459864 CA4761675 |
534 | A>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776459864 CA371320282 |
534 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA178346333 rs754531033 |
535 | M>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs746538209 CA4761673 |
535 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761672 rs780647063 |
535 | M>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761674 rs746538209 |
535 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761671 rs758828925 |
536 | Q>* | No |
ClinGen ExAC gnomAD |
|
|
rs1184245169 CA371320232 |
537 | R>G | No |
ClinGen TOPMed |
|
|
rs551501542 CA178346277 |
538 | V>A | No |
ClinGen gnomAD |
|
|
rs532922932 CA4761669 |
538 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4761668 rs757683861 |
539 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA4761667 rs754020435 |
539 | G>V | No |
ClinGen ExAC gnomAD |
|
|
CA4761666 rs777993903 |
540 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
rs749630928 CA178346250 |
542 | E>G | No |
ClinGen Ensembl |
|
|
rs752973004 CA4761643 |
543 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs781109524 CA4761642 |
543 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA4761640 rs750283905 |
544 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs765238972 CA4761637 |
547 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs201964441 CA4761638 |
547 | Y>H | No |
ClinGen 1000Genomes |
|
|
CA371319266 COSM3942708 rs1480992034 |
548 | E>Q | oesophagus [Cosmic] | No |
ClinGen cosmic curated gnomAD |
| TCGA novel | 550 | G>W | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs145545534 CA4761636 |
551 | H>Q | No |
ClinGen 1000Genomes ESP ExAC gnomAD |
|
|
CA4761634 rs764041467 |
555 | H>N | No |
ClinGen ExAC gnomAD |
|
|
CA4761633 rs760384831 |
555 | H>R | No |
ClinGen ExAC gnomAD |
|
|
rs771447488 CA4761631 |
557 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1227518823 CA371319015 |
559 | V>L | No |
ClinGen gnomAD |
|
|
rs774664596 CA4761629 |
562 | R>C | No |
ClinGen ExAC |
|
|
rs771474720 CA4761628 |
562 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1319052748 CA371318918 |
564 | L>V | No |
ClinGen gnomAD |
|
|
CA4761624 rs781508063 |
565 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770191942 CA4761625 |
565 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA371318879 rs1161376086 |
566 | N>D | No |
ClinGen TOPMed |
|
|
rs754960427 CA4761622 |
566 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 569 | G>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1171267797 CA371318810 |
571 | K>Q | No |
ClinGen TOPMed gnomAD |
|
|
CA371318795 rs1477995459 |
572 | A>T | No |
ClinGen gnomAD |
|
|
rs1453773679 CA371318769 |
573 | Q>L | No |
ClinGen TOPMed |
|
|
CA178342445 rs1017305195 |
574 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs141896681 CA4761619 |
577 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA4761620 rs141896681 |
577 | T>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA371318667 rs1586880825 |
578 | P>R | No |
ClinGen Ensembl |
|
|
rs368409800 CA4761616 |
579 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA178342417 rs532581518 |
580 | E>K | No |
ClinGen 1000Genomes gnomAD |
|
|
CA4761615 rs138212166 |
581 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1432950722 CA371318587 |
582 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA4761613 rs767213465 |
582 | G>C | No |
ClinGen ExAC gnomAD |
|
|
rs1586880549 CA371318546 |
584 | T>I | No |
ClinGen Ensembl |
|
|
CA371318482 rs1461526117 |
587 | V>A | No |
ClinGen TOPMed |
|
|
rs758904697 CA4761612 |
588 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA4761601 rs758594010 |
590 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749202132 CA4761600 |
594 | W>C | No |
ClinGen ExAC gnomAD |
|
|
CA371315268 rs1306079293 |
598 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs375445620 CA4761597 |
598 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs752542964 CA4761596 |
601 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs535043002 CA4761594 |
602 | L>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1331388954 CA371315071 |
605 | M>L | No |
ClinGen gnomAD |
|
|
CA371315007 rs1206762846 |
607 | K>E | No |
ClinGen gnomAD |
|
|
CA4761593 rs751217268 |
609 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371314940 rs1370548472 |
610 | G>V | No |
ClinGen gnomAD |
|
|
rs1167412623 CA371314930 |
611 | L>V | No |
ClinGen gnomAD |
|
|
CA4761592 rs765843301 |
612 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1415483959 CA371314903 |
613 | L>M | No |
ClinGen gnomAD |
|
|
rs762481351 CA4761591 |
614 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA178326458 rs1034444526 COSM3663823 |
616 | D>G | liver [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs200474335 CA4761590 |
621 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs527807260 CA4761589 |
623 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA371314710 rs1259422856 |
623 | G>R | No |
ClinGen TOPMed |
|
|
rs924813573 CA178326438 |
624 | D>E | No |
ClinGen TOPMed |
|
|
rs1171079032 CA371314651 |
625 | W>C | No |
ClinGen TOPMed |
|
|
rs372820604 CA4761587 |
626 | S>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372820604 CA4761588 |
626 | S>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4761586 rs199833011 |
629 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs775890030 CA4761584 |
631 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371314507 rs1374439250 |
632 | Q>* | No |
ClinGen TOPMed gnomAD |
|
|
CA178326397 rs969385896 |
633 | Q>H | No |
ClinGen TOPMed |
|
|
CA178321332 rs201048853 |
634 | G>E | No |
ClinGen Ensembl |
|
|
CA371310925 rs1407300523 |
635 | R>K | No |
ClinGen gnomAD |
|
|
rs547359737 CA4761570 |
637 | N>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1308825587 CA371310888 |
638 | E>K | No |
ClinGen TOPMed |
|
|
rs1390603967 CA371310864 |
639 | N>I | No |
ClinGen TOPMed gnomAD |
|
|
rs764481825 CA371310859 |
640 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA4761568 rs764481825 |
640 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA178321317 rs1011676489 |
644 | A>T | No |
ClinGen TOPMed |
|
|
rs775802086 CA4761566 |
648 | C>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774561119 CA4761564 |
649 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774561119 CA371310740 |
649 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761563 rs774561119 |
649 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371310719 rs1475239309 |
651 | L>P | No |
ClinGen gnomAD |
|
|
rs140478604 CA4761561 |
652 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4761560 rs781021623 |
656 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs151278995 RCV000914098 CA4761559 |
658 | T>A | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA178321232 rs764669838 |
659 | G>A | No |
ClinGen TOPMed |
|
|
rs764669838 CA178321244 |
659 | G>E | No |
ClinGen TOPMed |
|
|
rs746793332 CA4761558 |
659 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA4761557 rs779611275 |
661 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA371310552 rs1429416178 |
663 | G>R | No |
ClinGen TOPMed |
|
|
rs143327706 CA4761545 |
665 | I>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs774751383 CA4761546 |
665 | I>N | No |
ClinGen ExAC gnomAD |
|
|
CA371310337 rs1225635348 |
669 | I>V | No |
ClinGen gnomAD |
|
|
CA178320971 rs756073199 |
670 | M>L | No |
ClinGen ExAC gnomAD |
|
|
CA4761543 rs756073199 |
670 | M>V | No |
ClinGen ExAC gnomAD |
|
|
rs1235135268 CA371310250 |
672 | P>A | No |
ClinGen TOPMed |
|
|
rs1440799600 CA371310228 |
672 | P>L | No |
ClinGen TOPMed |
|
|
CA371310199 rs1455190416 |
673 | G>A | No |
ClinGen TOPMed |
|
|
CA371310214 rs1397511085 |
673 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs149186983 CA4761539 CA4761541 |
675 | H>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA371310158 rs1395246872 |
675 | H>Y | No |
ClinGen TOPMed |
|
|
rs778454709 CA4761536 |
676 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs745483367 CA4761537 |
676 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756734362 CA178320913 |
677 | W>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371310102 rs756734362 CA4761535 |
677 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761534 rs748753321 |
678 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1448982483 CA371309985 |
680 | T>A | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 681 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1002230330 CA178320903 |
682 | P>S | No |
ClinGen TOPMed |
|
|
rs907420761 CA178320899 |
683 | T>I | No |
ClinGen TOPMed |
|
|
CA371309884 rs1338943276 |
684 | N>D | No |
ClinGen TOPMed |
|
|
rs1196824814 CA371309828 |
685 | C>* | No |
ClinGen gnomAD |
|
|
CA4761531 rs537240662 |
685 | C>F | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1484322349 CA371309808 |
686 | R>K | No |
ClinGen TOPMed gnomAD |
|
|
CA4761528 rs755422939 |
688 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761524 rs763019067 |
689 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA4761525 rs374883847 |
689 | M>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA371309637 rs1218200754 |
690 | H>L | No |
ClinGen gnomAD |
|
|
CA4761523 rs372915483 |
691 | L>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 692 | G>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA178320836 rs969718735 |
692 | G>S | No |
ClinGen Ensembl |
|
|
CA4761521 rs760582148 |
693 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs897145443 CA178320821 |
694 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA371309542 rs897145443 |
694 | V>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1023309061 CA178320817 |
695 | I>S | No |
ClinGen Ensembl |
|
|
rs1038485727 CA178320803 |
696 | P>L | No |
ClinGen TOPMed |
|
|
rs775444911 CA371309474 |
696 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs775444911 CA4761520 |
696 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371309448 rs1429127055 |
697 | K>R | No |
ClinGen gnomAD |
|
|
CA371309435 rs1198869845 |
698 | E>K | No |
ClinGen TOPMed |
|
|
rs557817791 CA4761519 |
702 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773987662 CA4761517 |
703 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs770489156 CA4761516 |
703 | R>P | No |
ClinGen ExAC gnomAD |
|
|
rs770489156 CA371309254 |
703 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA371309193 rs1182948381 |
704 | C>* | No |
ClinGen gnomAD |
|
|
CA4761515 rs749030670 |
705 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA4761513 rs755727749 |
707 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA4761511 rs369717162 |
708 | T>N | No |
ClinGen ESP ExAC gnomAD |
|
|
CA371402203 rs769377583 |
709 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs747672605 CA4761494 |
710 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA178496048 rs867537692 |
712 | E>G | No |
ClinGen Ensembl |
|
|
CA371402178 rs1404126052 |
713 | E>* | No |
ClinGen TOPMed |
|
|
CA371402162 rs1187960244 |
715 | K>R | No |
ClinGen gnomAD |
|
|
rs1227618857 CA371402156 |
716 | V>M | No |
ClinGen gnomAD |
|
|
rs769277402 CA4761492 |
719 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs1563609732 CA371402121 |
721 | D>Y | No |
ClinGen Ensembl |
|
|
rs747609767 CA4761490 |
722 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371402102 COSM3942707 rs1437166819 |
724 | E>K | oesophagus [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
CA371402084 rs1338898133 |
726 | E>* | No |
ClinGen TOPMed |
|
|
rs758835671 CA4761488 COSM1100939 |
726 | E>D | endometrium [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs765610535 CA4761486 |
727 | V>* | No |
ClinGen ExAC |
|
|
CA371402075 rs1194122716 |
727 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA4761487 rs147092046 |
727 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1563609339 CA371402068 |
728 | W>C | No |
ClinGen Ensembl |
|
|
CA371402059 rs1586106062 |
729 | Q>H | No |
ClinGen Ensembl |
|
| TCGA novel | 729 | Q>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4761485 rs147729399 |
730 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs544944229 CA178495997 |
730 | D>N | No |
ClinGen 1000Genomes gnomAD |
|
|
CA4761484 rs147729399 |
730 | D>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1415441083 CA371402041 |
732 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
CA4761482 rs371485848 |
735 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4761481 rs759451621 |
736 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751559728 CA4761480 |
737 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1048454252 CA178495973 |
738 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1245883167 CA371402010 |
738 | F>S | No |
ClinGen gnomAD |
|
|
CA4761479 rs766051230 |
739 | I>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766051230 CA178495969 |
739 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA371402001 rs762826838 |
740 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762826838 CA4761478 COSM1569592 |
740 | V>M | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs1198666848 CA371401992 |
741 | D>G | No |
ClinGen gnomAD |
|
|
rs556043425 CA4761477 |
742 | V>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA371401972 rs1392687811 |
744 | H>Y | No |
ClinGen TOPMed |
|
|
rs568263471 CA4761475 |
745 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4761474 rs776266998 |
746 | E>* | No |
ClinGen ExAC gnomAD |
|
|
rs1332688459 CA371401948 |
748 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA371401944 rs1414410038 |
748 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA371401947 rs1332688459 |
748 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA178495904 rs533398607 |
750 | Q>P | No |
ClinGen Ensembl |
|
|
rs780640026 CA4761471 |
752 | R>K | No |
ClinGen ExAC gnomAD |
|
|
CA4761470 rs569811757 COSM332499 |
753 | R>C | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs141861375 CA4761469 |
753 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs192951706 CA4761468 CA4761467 |
754 | S>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs754112474 CA4761466 |
755 | L>P | No |
ClinGen ExAC gnomAD |
1 associated diseases with Q12797
[MIM: 601552]: Facial dysmorphism, lens dislocation, anterior segment abnormalities, and spontaneous filtering blebs (FDLAB)
A syndrome characterized by dislocated crystalline lenses and anterior segment abnormalities in association with a distinctive facies involving flat cheeks and a beaked nose. Some affected individuals develop highly unusual non-traumatic conjunctival cysts (filtering blebs). {ECO:0000269|PubMed:24768550}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A syndrome characterized by dislocated crystalline lenses and anterior segment abnormalities in association with a distinctive facies involving flat cheeks and a beaked nose. Some affected individuals develop highly unusual non-traumatic conjunctival cysts (filtering blebs). {ECO:0000269|PubMed:24768550}. Note=The disease is caused by variants affecting the gene represented in this entry.
4 regional properties for Q12797
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Aspartyl/asparaginy/proline hydroxylase | 591 - 745 | IPR007803 |
| domain | Aspartyl beta-hydroxylase/Triadin domain | 43 - 108 | IPR007943 |
| repeat | Tetratricopeptide repeat | 341 - 374 | IPR019734-1 |
| repeat | Tetratricopeptide repeat | 454 - 487 | IPR019734-2 |
Functions
| Description | ||
|---|---|---|
| EC Number | 1.14.11.16 | With 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
10 GO annotations of cellular component
| Name | Definition |
|---|---|
| calcium channel complex | An ion channel complex through which calcium ions pass. |
| cortical endoplasmic reticulum | A cortical network of highly dynamic tubules that are juxtaposed to the plasma membrane and undergo ring closure and tubule-branching movements. |
| endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). |
| endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. |
| integral component of endoplasmic reticulum membrane | The component of the endoplasmic reticulum membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| junctional sarcoplasmic reticulum membrane | The part of the sarcoplasmic reticulum membrane that contains calcium release channels, is devoted to calcium release and is juxtaposed to transverse tubule membrane. The junctional sarcoplasmic reticulum membrane consists of the junctional region of the terminal cisterna membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
| sarcoplasmic reticulum lumen | The volume enclosed by the membranes of the sarcoplasmic reticulum. |
| sarcoplasmic reticulum membrane | The lipid bilayer surrounding the sarcoplasmic reticulum. |
6 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium ion binding | Binding to a calcium ion (Ca2+). |
| electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. |
| peptidyl-aspartic acid 3-dioxygenase activity | Catalysis of the reaction: protein L-aspartate + 2-oxoglutarate + O2 = protein 3-hydroxy-L-aspartate + succinate + CO2. |
| structural constituent of muscle | The action of a molecule that contributes to the structural integrity of a muscle fiber. |
| structural molecule activity | The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell. |
| transmembrane transporter binding | Binding to a transmembrane transporter, a protein or protein complex that enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
27 GO annotations of biological process
| Name | Definition |
|---|---|
| activation of cysteine-type endopeptidase activity | Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase. |
| activation of store-operated calcium channel activity | A process that initiates the activity of an inactive store-operated calcium channel. |
| calcium ion homeostasis | Any process involved in the maintenance of an internal steady state of calcium ions within an organism or cell. |
| calcium ion transmembrane transport | A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
| cell population proliferation | The multiplication or reproduction of cells, resulting in the expansion of a cell population. |
| cellular response to calcium ion | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus. |
| detection of calcium ion | The series of events in which a calcium ion stimulus is received by a cell and converted into a molecular signal. |
| face morphogenesis | The process in which the anatomical structures of the face are generated and organized. The face is the ventral division of the head. |
| limb morphogenesis | The process in which the anatomical structures of a limb are generated and organized. A limb is a paired appendage of a tetrapod used for locomotion or grasping. |
| muscle contraction | A process in which force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. |
| negative regulation of cell population proliferation | Any process that stops, prevents or reduces the rate or extent of cell proliferation. |
| pattern specification process | Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate. |
| peptidyl-aspartic acid hydroxylation | The hydroxylation of peptidyl-aspartic acid to form peptidyl-hydroxyaspartic acid. |
| positive regulation of calcium ion transport into cytosol | Any process that increases the rate of the directed movement of calcium ions into the cytosol of a cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components. |
| positive regulation of DNA-templated transcription | Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
| positive regulation of intracellular protein transport | Any process that activates or increases the frequency, rate or extent of the directed movement of proteins within cells. |
| positive regulation of proteolysis | Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein. |
| positive regulation of ryanodine-sensitive calcium-release channel activity | Any process that increases the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts. |
| regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion | Any process that modulates the frequency, rate or extent of cardiac muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction. |
| regulation of cell communication by electrical coupling | Any process that modulates the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels. |
| regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity | Any process that modulates the frequency, rate or extent of the activity of the inositol 1,4,5-trisphosphate-sensitive calcium-release channel. |
| regulation of protein depolymerization | Any process that modulates the frequency, rate or extent of protein depolymerization. |
| regulation of protein stability | Any process that affects the structure and integrity of a protein, altering the likelihood of its degradation or aggregation. |
| regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum | Any process that modulates the rate, frequency or extent of release of sequestered calcium ion into cytosol by the sarcoplasmic reticulum, the process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels. |
| regulation of ryanodine-sensitive calcium-release channel activity | Any process that modulates the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts. |
| response to ATP | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus. |
| roof of mouth development | The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAQRKNAKSS | GNSSSSGSGS | GSTSAGSSSP | GARRETKHGG | HKNGRKGGLS | GTSFFTWFMV |
| 70 | 80 | 90 | 100 | 110 | 120 |
| IALLGVWTSV | AVVWFDLVDY | EEVLGKLGIY | DADGDGDFDV | DDAKVLLGLK | ERSTSEPAVP |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PEEAEPHTEP | EEQVPVEAEP | QNIEDEAKEQ | IQSLLHEMVH | AEHVEGEDLQ | QEDGPTGEPQ |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QEDDEFLMAT | DVDDRFETLE | PEVSHEETEH | SYHVEETVSQ | DCNQDMEEMM | SEQENPDSSE |
| 250 | 260 | 270 | 280 | 290 | 300 |
| PVVEDERLHH | DTDDVTYQVY | EEQAVYEPLE | NEGIEITEVT | APPEDNPVED | SQVIVEEVSI |
| 310 | 320 | 330 | 340 | 350 | 360 |
| FPVEEQQEVP | PETNRKTDDP | EQKAKVKKKK | PKLLNKFDKT | IKAELDAAEK | LRKRGKIEEA |
| 370 | 380 | 390 | 400 | 410 | 420 |
| VNAFKELVRK | YPQSPRARYG | KAQCEDDLAE | KRRSNEVLRG | AIETYQEVAS | LPDVPADLLK |
| 430 | 440 | 450 | 460 | 470 | 480 |
| LSLKRRSDRQ | QFLGHMRGSL | LTLQRLVQLF | PNDTSLKNDL | GVGYLLIGDN | DNAKKVYEEV |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LSVTPNDGFA | KVHYGFILKA | QNKIAESIPY | LKEGIESGDP | GTDDGRFYFH | LGDAMQRVGN |
| 550 | 560 | 570 | 580 | 590 | 600 |
| KEAYKWYELG | HKRGHFASVW | QRSLYNVNGL | KAQPWWTPKE | TGYTELVKSL | ERNWKLIRDE |
| 610 | 620 | 630 | 640 | 650 | 660 |
| GLAVMDKAKG | LFLPEDENLR | EKGDWSQFTL | WQQGRRNENA | CKGAPKTCTL | LEKFPETTGC |
| 670 | 680 | 690 | 700 | 710 | 720 |
| RRGQIKYSIM | HPGTHVWPHT | GPTNCRLRMH | LGLVIPKEGC | KIRCANETKT | WEEGKVLIFD |
| 730 | 740 | 750 | |||
| DSFEHEVWQD | ASSFRLIFIV | DVWHPELTPQ | QRRSLPAI |