Q11CR1
Gene name |
rimM |
Protein name |
Ribosome maturation factor RimM |
Names |
|
Species |
Chelativorans sp (strain BNC1) |
KEGG Pathway |
mes:Meso_3443 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q11CR1
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q11CR1-F1 | Predicted | AlphaFoldDB |
No variants for Q11CR1
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q11CR1 | |||||
No associated diseases with Q11CR1
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| ribosome | An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| ribosome binding | Binding to a ribosome. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| ribosomal small subunit biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a small ribosomal subunit; includes transport to the sites of protein synthesis. |
| rRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| METHMAKPKA | PAGIENPVQL | AVIGAAHGIK | GEVRVKTFTE | DPMALGSYGP | LHMVDGRVLQ |
| 70 | 80 | 90 | 100 | 110 | 120 |
| VAAIRPAKEV | VIVRFKGVDG | RNAAEALNGE | ALFVDRSALP | EKLEEEEFYY | ADLIGMAVLD |
| 130 | 140 | 150 | 160 | 170 | 180 |
| EKGENLGRVV | AVHNFGAGDL | LEFRENSGPT | VIIPFTRDAV | PDIDLSNNTI | RIDSITAGLD |
| 190 | 200 | 210 | |||
| NAELSGEEDE | AEGPESARGS | RPRGPKSAGE | PR |