Q0UZ59

PR
Gene name
DBP9 (SNOG_02955)
Protein name
ATP-dependent RNA helicase DBP9
Names
Species
Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume blotch fungus) (Parastagonospora nodorum)
KEGG Pathway
pno:SNOG_02955
EC number
3.6.4.13: Acting on ATP; involved in cellular and subcellular movement
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-65 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q0UZ59

Entry ID Method Resolution Chain Position Source
AF-Q0UZ59-F1 Predicted AlphaFoldDB

No variants for Q0UZ59

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q0UZ59

No associated diseases with Q0UZ59

4 regional properties for Q0UZ59

Type Name Position InterPro Accession
domain Helicase, C-terminal 260 - 469 IPR001650
domain DEAD/DEAH box helicase domain 71 - 237 IPR011545
domain Helicase superfamily 1/2, ATP-binding domain 66 - 264 IPR014001
domain RNA helicase, DEAD-box type, Q motif 47 - 75 IPR014014

Functions

Description
EC Number 3.6.4.13 Acting on ATP; involved in cellular and subcellular movement
Subcellular Localization
  • Nucleus, nucleolus
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
nucleolus A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.

6 GO annotations of molecular function

Name Definition
ATP binding Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
ATP hydrolysis activity Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.
DNA helicase activity Unwinding of a DNA helix, driven by ATP hydrolysis.
DNA/RNA helicase activity Unwinding of a DNA/RNA duplex, i.e. a double helix in which a strand of DNA pairs with a complementary strand of RNA, driven by ATP hydrolysis.
RNA binding Binding to an RNA molecule or a portion thereof.
RNA helicase activity Unwinding of an RNA helix, driven by ATP hydrolysis.

1 GO annotations of biological process

Name Definition
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MAMKRKLNEH DVPEPESPQS PKRRASDASQ SEPASPPAPT PAKEVVASFA ELQLEPRLLR
70 80 90 100 110 120
GIRDQKWGSP TAVQSKAIPL ALQGRDILAR SGTGTGKTGA YLLPILHNTL LRKGKTSLIL
130 140 150 160 170 180
VPTKELALQI TKVAKALSAH CGQAVRIQNI AGKESEVVTK AKLADNPDIV IATPARASAN
190 200 210 220 230 240
INTGALAVTE LAHLVVDEGD LVMGYGFKED LDQIAQNIPK GVQMFLMSAT LNTEVESLGS
250 260 270 280 290 300
LLCNDPVVLK LDDLDKDSKR VKQYVIKCAE EEKFLLIYAM FKLGLIKGKT IVFVGDTDRS
310 320 330 340 350 360
YRVKLFLEQF GIKSCVLNSE LPLASRLHIV EEFNKNIYNI LIASDETEIL GSQKKADESR
370 380 390 400 410 420
PKKKPKTDKE AKNDSGVSRG IDFLNVSCVL NFDFPATYKS YFHRIGRTAR AGKSGTAISF
430 440 450 460 470 480
IIPKDKYRKH KSTTFAGCEN DEEVLKKVEK HQEAGQKLEN YNFDMKRLEP FRYRFGDALR
490 500 510 520 530 540
SVTRIAIREA RIKEIRLELS KSQKLSRYFE ENPEALAHLR HDQTLNHPAR IQPHLKHVPD
550 560 570 580 590
YLLPGGSRKP ADVGFVGLNV PRVNKRQYVK GKGRKVVRRN GKVDPLKTFN ARGKGKK