Q087H9
Gene name |
kdsA |
Protein name |
2-dehydro-3-deoxyphosphooctonate aldolase |
Names |
3-deoxy-D-manno-octulosonic acid 8-phosphate synthase, KDO-8-phosphate synthase, KDO 8-P synthase, KDOPS, Phospho-2-dehydro-3-deoxyoctonate aldolase |
Species |
Shewanella frigidimarina (strain NCIMB 400) |
KEGG Pathway |
sfr:Sfri_0728 |
EC number |
2.5.1.55: Transferring alkyl or aryl groups, other than methyl groups |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for Q087H9
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-Q087H9-F1 | Predicted | AlphaFoldDB |
No variants for Q087H9
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for Q087H9 | |||||
No associated diseases with Q087H9
1 regional properties for Q087H9
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | DAHP synthetase I/KDSA | 10 - 274 | IPR006218 |
Functions
| Description | ||
|---|---|---|
| EC Number | 2.5.1.55 | Transferring alkyl or aryl groups, other than methyl groups |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| 3-deoxy-8-phosphooctulonate synthase activity | Catalysis of the reaction: D-arabinose 5-phosphate + H(2)O + phosphoenolpyruvate = 8-phospho-3-deoxy-D-manno-oct-2-ulosonate + 2 H(+) + phosphate. |
1 GO annotations of biological process
| Name | Definition |
|---|---|
| keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | The chemical reactions and pathways resulting in the formation of keto-3-deoxy-D-manno-octulosonic acid, an acidic sugar present in lipopolysaccharides of the outer membranes of some Gram-negative bacteria. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDQKIIQLSN | NVQVANDKPF | VLFGGMNVLE | SRDLAMSIAE | HYVEVTQKLG | IPYVFKASFD |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KANRSSVNSY | RGPGMEEGLR | IFEEIKSTFN | VPMITDVHEI | HQCAPVAEVV | DIIQLPAFLA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| RQTDLVVAMA | KTGAVINVKK | PQFLAPHEMR | HIITKFNEAG | NDNIILCERG | SSFGYNNLVV |
| 190 | 200 | 210 | 220 | 230 | 240 |
| DMLGMDEMKQ | TGYPVIFDAT | HALQRPGGRA | DSAGGRRAQA | TELARSGMAL | GLAGLFIEAH |
| 250 | 260 | 270 | 280 | ||
| PDPDNAKCDG | PCALPLHLLE | KYLTQMKAVD | ELVKSFEFID | TSK |