Q04EK0

PR
Gene name
greA
Protein name
Transcription elongation factor GreA
Names
Transcript cleavage factor GreA
Species
Oenococcus oeni (strain ATCC BAA-331 / PSU-1)
KEGG Pathway
ooe:OEOE_1246
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

3-92 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q04EK0

Entry ID Method Resolution Chain Position Source
AF-Q04EK0-F1 Predicted AlphaFoldDB

No variants for Q04EK0

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q04EK0

No associated diseases with Q04EK0

4 regional properties for Q04EK0

Type Name Position InterPro Accession
domain Transcription elongation factor, GreA/GreB, C-terminal 84 - 159 IPR001437
conserved_site Transcription elongation factor, GreA/GreB, conserved site 20 - 51 IPR018151-1
conserved_site Transcription elongation factor, GreA/GreB, conserved site 123 - 139 IPR018151-2
domain Transcription elongation factor, GreA/GreB, N-terminal 8 - 77 IPR022691

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

2 GO annotations of molecular function

Name Definition
DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
RNA polymerase binding Binding to an RNA polymerase molecule or complex.

1 GO annotations of biological process

Name Definition
regulation of DNA-templated transcription elongation Any process that modulates the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MAEEKTYPMT AEGLAKLQAE LDDLITNKRP AITSRIQEAR SFGDLSENSE YQSAKDEQAF
70 80 90 100 110 120
VEGRVKQLQQ MIQFAQVIDA SSASKNVVTL GKKISFKEVP DGDEETYTIV GSAESDPLSG
130 140 150 160
KISNDSPMGK ALLDHKTGDK VEIPLPENHS VTVEILHVSK AK