Q03DX9

PR
Gene name
rpoE
Protein name
Probable DNA-directed RNA polymerase subunit delta
Names
RNAP delta factor
Species
Pediococcus pentosaceus (strain ATCC 25745 / CCUG 21536 / LMG 10740 / 183-1w)
KEGG Pathway
ppe:PEPE_1572
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

83-178 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for Q03DX9

Entry ID Method Resolution Chain Position Source
AF-Q03DX9-F1 Predicted AlphaFoldDB

No variants for Q03DX9

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q03DX9

No associated diseases with Q03DX9

1 regional properties for Q03DX9

Type Name Position InterPro Accession
domain ASXL, HARE-HTH domain 14 - 81 IPR007759

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
DNA-directed RNA polymerase complex A protein complex that possesses DNA-directed RNA polymerase activity.

1 GO annotations of molecular function

Name Definition
DNA-directed 5'-3' RNA polymerase activity Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.

2 GO annotations of biological process

Name Definition
DNA-templated transcription The synthesis of an RNA transcript from a DNA template.
regulation of DNA-templated transcription Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MELENFKGQN KNELSMIEVA HAILAKSGEP MAFVDLANAV QSYLDKTDEE FRNRLSQFYT
70 80 90 100 110 120
DLNVDGSFIS LGENTWGLRT WYPFESIDEA LIHAEDEDED RPVRKKRKKV NAFLADAADD
130 140 150 160 170
DDVIDYDSDD PEDEEVEAED TTSDDAPAFE DLSNDDDTDV LPDGIEGQLS ELNEDDEN