Q03513

PR
Gene name
ccmM
Protein name
Carboxysome assembly protein CcmM
Names
CcmM58, M58, Carbon dioxide concentrating mechanism protein CcmM, Carboxysome shell associated protein CcmM
Species
Synechococcus elongatus (strain PCC 7942 / FACHB-805) (Anacystis nidulans R2)
KEGG Pathway
syf:Synpcc7942_1423
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

285-361 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

7 structures for Q03513

Entry ID Method Resolution Chain Position Source
6HBA X-ray 165 A A/B 225-313 PDB
6HBB X-ray 120 A A/B 225-313 PDB
6HBC EM 278 A A 225-313 PDB
7D6C X-ray 289 A 1/2 1-209 PDB
7O4Z X-ray 167 A A 1-181 PDB
7O54 X-ray 163 A A 1-181 PDB
AF-Q03513-F1 Predicted AlphaFoldDB

No variants for Q03513

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for Q03513

No associated diseases with Q03513

4 regional properties for Q03513

Type Name Position InterPro Accession
domain Ribulose bisphosphate carboxylase small subunit, domain 214 - 309 IPR000894-1
domain Ribulose bisphosphate carboxylase small subunit, domain 333 - 425 IPR000894-2
domain Ribulose bisphosphate carboxylase small subunit, domain 446 - 539 IPR000894-3
domain Carbonic anhydrase, gamma-class, LbH domain 16 - 192 IPR047223

Functions

Description
EC Number
Subcellular Localization
  • Carboxysome
  • This cyanobacterium makes beta-type carboxysomes (Ref
  • 4)
  • Both isoforms are found equally distributed in the interior of the carboxysome (PubMed:28963440)
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
carboxysome An organelle consisting of a proteinaceous coat and enzymes for the fixation of CO(2). It augments the concentration of CO(2) in the vicinity of RuBisCO to increase the efficiency of CO(2) fixation under atmospheric conditions.

1 GO annotations of molecular function

Name Definition
structural constituent of carboxysome The action of a molecule that contributes to the structural integrity of a carboxysome, an organelle found in all cyanobacteria and some chemoautotrophs, consisting of a proteinaceous coat and enzymes for the fixation of CO(2).

2 GO annotations of biological process

Name Definition
carbon fixation A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MPSPTTVPVA TAGRLAEPYI DPAAQVHAIA SIIGDVRIAA GVRVAAGVSI RADEGAPFQV
70 80 90 100 110 120
GKESILQEGA VIHGLEYGRV LGDDQADYSV WIGQRVAITH KALIHGPAYL GDDCFVGFRS
130 140 150 160 170 180
TVFNARVGAG SVIMMHALVQ DVEIPPGRYV PSGAIITTQQ QADRLPEVRP EDREFARHII
190 200 210 220 230 240
GSPPVIVRST PAATADFHST PTPSPLRPSS SEATTVSAYN GQGRLSSEVI TQVRSLLNQG
250 260 270 280 290 300
YRIGTEHADK RRFRTSSWQP CAPIQSTNER QVLSELENCL SEHEGEYVRL LGIDTNTRSR
310 320 330 340 350 360
VFEALIQRPD GSVPESLGSQ PVAVASGGGR QSSYASVSGN LSAEVVNKVR NLLAQGYRIG
370 380 390 400 410 420
TEHADKRRFR TSSWQSCAPI QSSNERQVLA ELENCLSEHE GEYVRLLGID TASRSRVFEA
430 440 450 460 470 480
LIQDPQGPVG SAKAAAAPVS SATPSSHSYT SNGSSSSDVA GQVRGLLAQG YRISAEVADK
490 500 510 520 530
RRFQTSSWQS LPALSGQSEA TVLPALESIL QEHKGKYVRL IGIDPAARRR VAELLIQKP