P80042

PR
Gene name
GGPS1
Protein name
Geranylgeranyl pyrophosphate synthase, chloroplastic
Names
GGPP synthase, GGPS, (2E,6E)-farnesyl diphosphate synthase, Dimethylallyltranstransferase, Farnesyl diphosphate synthase, Farnesyltranstransferase, Geranyltranstransferase
Species
Capsicum annuum (Capsicum pepper)
KEGG Pathway
cann:107867046
EC number
2.5.1.1: Transferring alkyl or aryl groups, other than methyl groups
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

11-99 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for P80042

Entry ID Method Resolution Chain Position Source
AF-P80042-F1 Predicted AlphaFoldDB

No variants for P80042

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for P80042

No associated diseases with P80042

2 regional properties for P80042

Type Name Position InterPro Accession
conserved_site Polyprenyl synthetase, conserved site 154 - 170 IPR033749-1
conserved_site Polyprenyl synthetase, conserved site 287 - 299 IPR033749-2

Functions

Description
EC Number 2.5.1.1 Transferring alkyl or aryl groups, other than methyl groups
Subcellular Localization
  • Plastid, chloroplast
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
plastid Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

4 GO annotations of molecular function

Name Definition
dimethylallyltranstransferase activity Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate.
farnesyltranstransferase activity Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate.
geranyltranstransferase activity Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = 2-trans,6-trans-farnesyl diphosphate + diphosphate.
metal ion binding Binding to a metal ion.

5 GO annotations of biological process

Name Definition
carotenoid biosynthetic process The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.
farnesyl diphosphate biosynthetic process The chemical reactions and pathways resulting in the formation of farnesyl diphosphate.
geranyl diphosphate biosynthetic process The chemical reactions and pathways resulting in the formation of geranyl diphosphate.
geranylgeranyl diphosphate biosynthetic process The chemical reactions and pathways resulting in the formation of geranylgeranyl diphosphate.
isoprenoid metabolic process The chemical reactions and pathways involving isoprenoid compounds, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MRSMNLVDLW AQQACLVFNQ TLSYKSFNGF MKIPLKNSKI NPKLNKKRPF SPLTVSAIAT
70 80 90 100 110 120
TKEDERIEAA QTEEPFNFKI YVTEKAISVN KALDEAIIVK EPHVIHEAMR YSLLAGGKRV
130 140 150 160 170 180
RPMLCLAACE LVGGNQENAM AAACAVEMIH TMSLIHDDLP CMDNDDLRRG KPTNHKIYGE
190 200 210 220 230 240
DVAVLAGDSL LAFAFEHIVN STAGVTPSRI VGAVAELAKS IGTEGLVAGQ VADIKCTGNA
250 260 270 280 290 300
SVSLETLEFI HVHKTAALLE SSVVLGAILG GGTNVEVEKL RRFARCIGLL FQVVDDILDV
310 320 330 340 350 360
TKSSEELGKT AGKDLVVDKT TYPKLLGLEK AKEFAAELNR EAKQQLEGFD SRKAAPLIAL
ADYIAYRDN