P78345
Gene name |
RPP38 |
Protein name |
Ribonuclease P protein subunit p38 |
Names |
RNaseP protein p38 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:10557 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
3 structures for P78345
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 6AHR | EM | 392 A | C | 1-283 | PDB |
| 6AHU | EM | 366 A | C | 1-283 | PDB |
| AF-P78345-F1 | Predicted | AlphaFoldDB |
258 variants for P78345
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
CA203437173 rs907467683 |
2 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA5418054 rs746325635 |
3 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1205120096 CA376082177 |
3 | A>T | No |
ClinGen gnomAD |
|
|
CA5418055 rs746325635 |
3 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376082196 rs1471333627 |
6 | Q>P | No |
ClinGen gnomAD |
|
|
rs77992199 CA5418056 |
8 | P>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs77992199 CA376082211 |
8 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM427320 CA5418059 rs372894666 |
10 | R>Q | large_intestine breast [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA5418058 rs138934702 |
10 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs767449033 CA5418061 |
12 | S>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5418060 rs554194985 |
12 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1443309492 CA376082233 |
13 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs143355976 COSM916664 CA5418063 |
14 | R>C | endometrium [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA5418064 rs752169129 COSM916665 |
14 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs143355976 CA376082237 |
14 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5418066 rs375521258 |
16 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1226849263 CA376082253 |
16 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1226849263 CA376082252 |
16 | T>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1340886584 CA376082271 |
18 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs777334090 CA5418070 |
23 | T>M | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA5418073 rs373142031 |
24 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5418072 rs756889955 |
24 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA5418075 rs768845700 |
25 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA203437245 rs111843304 |
26 | N>D | No |
ClinGen Ensembl |
|
|
rs1379470604 CA376082413 |
28 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
CA376082437 rs1472906477 |
30 | I>V | No |
ClinGen TOPMed |
|
|
CA5418077 rs374861978 |
32 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs772304612 CA5418079 |
32 | R>H | No |
ClinGen ExAC |
|
|
rs1168241041 CA376082458 |
33 | W>R | No |
ClinGen gnomAD |
|
| TCGA novel | 34 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5418082 rs760729358 |
34 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs191796910 CA5418084 |
35 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs191796910 CA5418083 |
35 | A>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs764888526 CA5418085 |
36 | L>M | No |
ClinGen ExAC gnomAD |
|
|
rs369278180 CA5418086 |
37 | E>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1412000968 CA376082482 |
37 | E>Q | No |
ClinGen gnomAD |
|
|
CA5418087 rs138478042 |
39 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1228217778 CA376082507 |
40 | D>G | No |
ClinGen gnomAD |
|
|
rs1296009577 CA376082512 |
41 | M>V | No |
ClinGen gnomAD |
|
|
CA376082523 rs1350742133 |
42 | H>R | No |
ClinGen gnomAD |
|
|
rs1220338812 CA376082529 |
43 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA203437292 rs887130858 |
43 | F>L | No |
ClinGen gnomAD |
|
|
rs1589275162 CA376082536 |
44 | I>V | No |
ClinGen Ensembl |
|
|
CA203437299 rs941603364 |
46 | Q>L | No |
ClinGen Ensembl |
|
|
CA5418089 rs41284459 |
47 | T>M | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1302734402 CA376082560 |
48 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA5418090 rs751327854 |
48 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs143960260 CA5418092 |
51 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA376082584 rs1187748122 |
51 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
CA5418093 rs377046447 |
53 | K>E | No |
ClinGen ESP ExAC gnomAD |
|
|
CA5418094 rs755541255 |
54 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1424478976 CA376082602 |
54 | A>V | No |
ClinGen gnomAD |
|
|
CA5418095 rs186655389 |
55 | I>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5418096 rs200609164 |
56 | G>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA376082615 rs1389714841 |
57 | L>F | No |
ClinGen gnomAD |
|
|
CA376082623 rs1434795967 |
58 | Q>* | No |
ClinGen gnomAD |
|
|
CA376082622 rs1434795967 |
58 | Q>E | No |
ClinGen gnomAD |
|
|
CA203437353 rs777770905 |
59 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs940023316 CA203437398 |
60 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs750418628 CA5418100 |
61 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA5418099 rs547184579 |
61 | E>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs759349215 CA5418103 |
62 | D>E | No |
ClinGen ExAC TOPMed |
|
|
rs776711730 CA376082648 |
62 | D>N | No |
ClinGen ExAC gnomAD |
|
|
CA5418101 rs776711730 COSM916667 |
62 | D>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1196518808 CA376082671 |
65 | K>* | No |
ClinGen TOPMed |
|
|
rs1269602238 CA376082703 |
67 | N>D | No |
ClinGen gnomAD |
|
|
rs139598044 CA203437460 |
68 | K>* | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs139598044 CA5418104 |
68 | K>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs775350299 CA5418105 |
70 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 74 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376082830 rs1199477096 |
75 | E>A | No |
ClinGen gnomAD |
|
|
CA376082848 rs1271072961 |
76 | S>G | No |
ClinGen TOPMed |
|
|
CA203437478 rs938948809 |
76 | S>I | No |
ClinGen TOPMed gnomAD |
|
|
rs141142473 CA5418107 |
77 | R>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 78 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs763990360 CA5418108 |
82 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA5418109 rs374043157 |
85 | D>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5418112 rs199667725 |
86 | I>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5418111 rs3814171 VAR_051811 |
86 | I>V | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1412244139 CA376083017 |
87 | S>N | No |
ClinGen gnomAD |
|
|
CA203437533 VAR_023960 rs1052157 |
88 | E>D | No |
ClinGen UniProt Ensembl dbSNP |
|
|
rs569236455 CA5418114 |
90 | L>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA376083063 rs1286136132 |
90 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA376083085 rs1358199746 |
91 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs139408682 CA5418115 |
92 | E>* | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1454815817 CA376083102 |
92 | E>G | No |
ClinGen gnomAD |
|
|
rs758695550 CA5418117 |
93 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5418116 rs753210924 |
93 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs144151968 CA5418118 |
95 | T>I | No |
ClinGen 1000Genomes ESP TOPMed gnomAD |
|
|
CA5418121 rs747182566 |
97 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs771171027 CA5418122 |
98 | K>* | No |
ClinGen ExAC |
|
|
rs1473316194 CA376083250 |
101 | V>A | No |
ClinGen TOPMed gnomAD |
|
|
CA376083246 rs1370459061 |
101 | V>L | No |
ClinGen gnomAD |
|
| TCGA novel | 102 | S>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745950245 CA5418124 |
102 | S>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376083274 rs1424995317 |
103 | G>E | No |
ClinGen TOPMed |
|
|
rs1456809892 CA376083287 |
104 | W>* | No |
ClinGen gnomAD |
|
|
rs749496880 CA5418125 |
105 | T>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1032887822 CA203437589 |
107 | A>P | No |
ClinGen Ensembl |
|
|
rs762815478 CA5418127 |
107 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs768522992 CA5418128 |
108 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA5418129 rs774319886 |
109 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs774319886 CA376083358 |
109 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1354001556 CA376083374 |
111 | K>R | No |
ClinGen gnomAD |
|
|
CA5418132 rs1132078 VAR_023961 |
114 | A>V | No |
ClinGen UniProt ExAC dbSNP gnomAD |
|
|
rs1203169085 CA376083399 |
115 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1203169085 CA376083398 |
115 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs758924573 CA5418136 |
116 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5418135 rs753185172 |
116 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA5418137 rs778068221 COSM916668 |
117 | V>I | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs751887148 CA5418138 |
118 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5418139 rs757678361 |
119 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA5418141 rs746086036 |
121 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA203437726 rs772049454 |
121 | T>I | No |
ClinGen gnomAD |
|
|
CA5418142 rs139928020 |
122 | R>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1380300882 CA376083445 |
123 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs150003104 CA5418143 |
123 | A>T | No |
ClinGen ESP ExAC |
|
|
rs749198267 CA5418144 |
124 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA5418145 rs768684713 |
125 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA5418146 rs774481311 |
127 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs1564549766 CA376083498 |
132 | V>L | No |
ClinGen Ensembl |
|
|
rs772853778 CA376083511 |
134 | V>A | No |
ClinGen ExAC TOPMed |
|
|
CA5418149 rs772853778 |
134 | V>G | No |
ClinGen ExAC TOPMed |
|
|
CA376083509 CA203437746 rs941342197 |
134 | V>L | No |
ClinGen TOPMed gnomAD |
|
|
CA5418151 rs765861627 |
137 | S>* | No |
ClinGen ExAC gnomAD |
|
|
CA5418153 rs759083919 |
138 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs776032729 CA5418152 |
138 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA5418154 rs764560286 |
139 | K>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376083567 rs1223669875 |
143 | I>F | No |
ClinGen gnomAD |
|
|
CA203437777 rs1038337633 |
145 | S>* | No |
ClinGen Ensembl |
|
|
CA376083590 CA376083589 rs1178878096 |
146 | H>Q | No |
ClinGen gnomAD |
|
|
CA5418156 rs757553633 |
148 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs767790323 CA5418157 |
149 | Q>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5418158 rs750613703 |
149 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756322806 CA5418159 |
150 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5418161 rs749360039 |
153 | S>N | No |
ClinGen ExAC gnomAD |
|
|
CA376083647 rs375720494 |
155 | S>I | No |
ClinGen ESP gnomAD |
|
|
rs375720494 CA203437816 |
155 | S>T | No |
ClinGen ESP gnomAD |
|
|
rs1589275932 CA376083654 |
156 | V>A | No |
ClinGen Ensembl |
|
|
rs755169517 CA5418162 |
159 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs1261477617 CA376083693 |
162 | P>L | No |
ClinGen gnomAD |
|
|
CA5418163 rs778987259 |
162 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778987259 CA376083689 |
162 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5418167 rs370750357 |
163 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA203437860 rs920011567 |
163 | R>W | No |
ClinGen TOPMed gnomAD |
|
|
rs770458219 CA5418168 |
164 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776312823 CA5418169 |
165 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776312823 CA376083703 |
165 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376083705 rs1433240107 |
165 | S>N | No |
ClinGen gnomAD |
|
|
CA203437881 rs201405215 |
168 | I>V | No |
ClinGen 1000Genomes |
|
|
CA5418172 rs764733426 |
169 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1564549961 CA376083730 |
169 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA5418173 rs764733426 |
169 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762330393 CA376083737 |
170 | P>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5418174 rs762330393 |
170 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs145237477 CA5418178 |
171 | V>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs145237477 CA5418177 |
171 | V>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA376083746 rs1295189059 |
172 | I>T | No |
ClinGen gnomAD |
|
|
rs747172388 CA203437961 |
172 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1391430014 CA376083751 |
173 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs1473737125 CA376083752 |
173 | G>D | No |
ClinGen TOPMed |
|
|
rs571141054 CA203437962 |
177 | V>F | No |
ClinGen Ensembl |
|
|
rs777424609 CA203437963 |
178 | L>P | No |
ClinGen Ensembl |
|
|
CA5418180 rs373652725 |
178 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5418181 rs149173426 |
179 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5418182 rs752628175 |
180 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs15772 CA376083800 |
181 | A>E | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
VAR_023962 CA5418183 rs15772 |
181 | A>G | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs15772 CA5418184 |
181 | A>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA376083813 rs1266428131 |
183 | K>R | No |
ClinGen gnomAD |
|
|
CA376083826 rs1488417104 |
185 | N>D | No |
ClinGen gnomAD |
|
|
CA5418186 rs372291454 |
185 | N>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs556577548 CA5418188 |
186 | T>S | No |
ClinGen 1000Genomes ExAC |
|
|
rs1473318458 CA376083839 |
187 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
CA203438029 rs1032711085 |
190 | V>M | No |
ClinGen TOPMed |
|
|
CA5418191 rs762568838 |
191 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
CA376083882 rs1457653250 |
193 | V>E | No |
ClinGen TOPMed |
|
|
CA5418193 rs773830340 |
194 | R>T | No |
ClinGen ExAC gnomAD |
|
|
rs1554818728 CA376083896 |
195 | A>V | No |
ClinGen Ensembl |
|
|
CA5418195 rs565147881 |
196 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5418196 rs376617328 |
197 | I>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1230271782 CA376083932 |
201 | P>R | No |
ClinGen gnomAD |
|
|
rs193084890 CA376083936 |
202 | S>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs193084890 CA203438111 |
202 | S>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5418198 VAR_051812 rs12249258 |
202 | S>R | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA5418199 rs193084890 |
202 | S>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs752793290 CA5418201 |
204 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA376083976 rs1479433622 |
208 | L>F | No |
ClinGen gnomAD |
|
|
rs1265605740 CA376083994 |
210 | D>E | No |
ClinGen TOPMed |
|
|
CA376083999 rs1183243196 |
211 | R>K | No |
ClinGen gnomAD |
|
|
rs10242 VAR_029298 CA5418205 |
212 | I>T | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
| rs762510670 | 217 | E>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs756945942 CA5418208 |
217 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756945942 CA5418209 |
217 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs759006449 CA203438178 |
218 | N>D | No |
ClinGen gnomAD |
|
|
CA5418211 rs769410492 |
221 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA5418212 rs779734454 |
222 | E>V | No |
ClinGen ExAC gnomAD |
|
|
rs748737243 CA5418213 |
223 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1352842924 CA376084079 |
223 | P>S | No |
ClinGen gnomAD |
|
|
CA203438218 rs982654226 |
226 | S>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1589276444 CA376084102 |
227 | Q>* | No |
ClinGen Ensembl |
|
|
rs1219842893 CA376084111 |
228 | D>H | No |
ClinGen TOPMed |
|
|
CA5418215 rs768281031 |
229 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA376084119 rs1300419948 COSM1187898 |
229 | R>K | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1300419948 CA376084120 |
229 | R>T | No |
ClinGen gnomAD |
|
| TCGA novel | 230 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 230 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773523035 CA5418216 |
230 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1004692072 CA203438250 |
231 | L>P | No |
ClinGen TOPMed |
|
|
rs761255084 CA5418217 |
232 | L>* | No |
ClinGen ExAC gnomAD |
|
|
CA376084155 rs1564550318 |
234 | T>I | No |
ClinGen Ensembl |
|
|
CA376084150 rs1305273107 |
234 | T>P | No |
ClinGen gnomAD |
|
|
rs1181471629 CA376084163 |
236 | F>L | No |
ClinGen gnomAD |
|
|
rs145152071 CA5418220 |
236 | F>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA203438277 rs11594277 |
239 | L>P | No |
ClinGen Ensembl |
|
|
rs1169682102 CA376084193 |
240 | S>* | No |
ClinGen TOPMed |
|
|
CA376084215 rs1417442865 |
243 | K>N | No |
ClinGen gnomAD |
|
|
CA203438284 rs868311782 |
244 | R>G | No |
ClinGen Ensembl |
|
|
rs1374661201 CA376084224 |
245 | K>E | No |
ClinGen TOPMed |
|
|
CA5418222 rs765534079 |
245 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5418223 rs753019590 |
246 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs150252368 CA376084246 |
248 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA203438317 rs377071911 |
248 | D>H | No |
ClinGen Ensembl |
|
|
rs974038287 CA203438345 |
249 | G>D | No |
ClinGen TOPMed |
|
|
rs764248783 CA5418225 |
249 | G>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs34040166 VAR_051813 CA5418226 |
250 | R>G | No |
ClinGen UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs562959917 CA5418229 |
250 | R>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs34040166 CA5418228 |
250 | R>W | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1702085 CA376084262 rs1482404152 |
252 | A>T | skin [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs755965550 CA5418230 |
252 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs912828805 CA203438379 |
254 | V>I | No |
ClinGen Ensembl |
|
|
rs1554818794 CA376084282 |
255 | T>K | No |
ClinGen Ensembl |
|
|
CA376084303 rs1303469594 |
258 | P>L | No |
ClinGen TOPMed |
|
|
rs748977336 CA5418232 |
259 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1564550518 CA376084322 |
261 | I>T | No |
ClinGen Ensembl |
|
|
CA5418234 rs754385395 |
262 | K>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1322346773 CA376084368 |
268 | P>S | No |
ClinGen gnomAD |
|
|
CA376084373 rs1330435131 |
269 | N>D | No |
ClinGen TOPMed |
|
|
CA376084382 rs1447179544 |
270 | K>* | No |
ClinGen TOPMed |
|
|
CA376084384 rs1157641918 |
270 | K>R | No |
ClinGen gnomAD |
|
|
CA376084392 rs1465223911 |
271 | I>K | No |
ClinGen gnomAD |
|
|
CA5418237 rs778504574 |
271 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs1465223911 CA376084391 |
271 | I>R | No |
ClinGen gnomAD |
|
|
rs530655020 CA203438508 |
274 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs530655020 CA5418238 |
274 | P>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1479034652 CA376084414 |
275 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs1191797148 CA376084418 |
275 | P>L | No |
ClinGen gnomAD |
|
|
rs1479034652 CA376084415 |
275 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA376084425 rs1465458241 |
276 | K>N | No |
ClinGen TOPMed |
|
|
rs771530138 CA5418239 |
278 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs777326656 CA5418240 |
279 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs746219631 CA376084453 |
280 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 280 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1161666726 CA376084449 |
280 | A>T | No |
ClinGen gnomAD |
|
|
CA5418241 rs746219631 |
280 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1437437762 CA376084454 |
281 | T>P | No |
ClinGen TOPMed |
|
|
rs1316813821 CA376084461 |
282 | P>A | No |
ClinGen gnomAD |
|
|
CA203438536 rs762584543 |
283 | K>E | No |
ClinGen Ensembl |
No associated diseases with P78345
1 regional properties for P78345
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Ribosomal protein L7Ae/L30e/S12e/Gadd45 | 101 - 186 | IPR004038 |
6 GO annotations of cellular component
| Name | Definition |
|---|---|
| fibrillar center | A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures. |
| multimeric ribonuclease P complex | A ribonuclease P complex that generally contains a single RNA molecule and several protein molecules. Examples of this complex are found in Archaeal species. |
| nucleolar ribonuclease P complex | A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| ribonuclease MRP complex | A ribonucleoprotein complex that contains an RNA molecule of the snoRNA family, and cleaves the rRNA precursor as part of rRNA transcript processing. It also has other roles: In S. cerevisiae it is involved in cell cycle-regulated degradation of daughter cell-specific mRNAs, while in mammalian cells it also enters the mitochondria and processes RNAs to create RNA primers for DNA replication. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| ribonuclease P activity | Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor. |
| ribonuclease P RNA binding | Binding to RNA subunit of ribonuclease P. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| rRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. |
| tRNA 5'-leader removal | Generation of the mature 5'-end of the tRNA, usually via an endonucleolytic cleavage by RNase P. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAAAPQAPGR | GSLRKTRPLV | VKTSLNNPYI | IRWSALESED | MHFILQTLED | RLKAIGLQKI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EDKKKKNKTP | FLKKESREKC | SIAVDISENL | KEKKTDAKQQ | VSGWTPAHVR | KQLAIGVNEV |
| 130 | 140 | 150 | 160 | 170 | 180 |
| TRALERRELL | LVLVCKSVKP | AMITSHLIQL | SLSRSVPACQ | VPRLSERIAP | VIGLKCVLAL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AFKKNTTDFV | DEVRAIIPRV | PSLSVPWLQD | RIEDSGENLE | TEPLESQDRE | LLDTSFEDLS |
| 250 | 260 | 270 | 280 | ||
| KPKRKLADGR | QASVTLQPLK | IKKLIPNPNK | IRKPPKSKKA | TPK |