P48270

PR
Gene name
rps4
Protein name
30S ribosomal protein S4, chloroplastic
Names
Species
Chlamydomonas reinhardtii (Chlamydomonas smithii)
KEGG Pathway
cre:ChreCp020
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

19-89 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for P48270

Entry ID Method Resolution Chain Position Source
AF-P48270-F1 Predicted AlphaFoldDB

3 variants for P48270

Variant ID(s) Position Change Description Diseaes Association Provenance
73 Q>P CC-3008; suppresses streptomycin dependence of the S12 mutant P90L [UniProt] No
90 V>GITERQLVNYV CC-3010; suppresses streptomycin dependence of the S12 mutant P90L [UniProt] No
92 K>IVNYVRK CC-3009; suppresses streptomycin dependence of the S12 mutant P90L [UniProt] No

No associated diseases with P48270

4 regional properties for P48270

Type Name Position InterPro Accession
domain Ribosomal protein S4/S9, N-terminal 3 - 109 IPR001912
domain RNA-binding S4 domain 110 - 174 IPR002942-1
domain RNA-binding S4 domain 191 - 256 IPR002942-2
conserved_site Ribosomal protein S4, conserved site 108 - 132 IPR018079

Functions

Description
EC Number
Subcellular Localization
  • Plastid, chloroplast
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
small ribosomal subunit The smaller of the two subunits of a ribosome.

2 GO annotations of molecular function

Name Definition
rRNA binding Binding to a ribosomal RNA.
structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.

3 GO annotations of biological process

Name Definition
positive regulation of translational fidelity Any process that increases the ability of the translational apparatus to interpret the genetic code.
response to antibiotic Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.
translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSRYLGPRLR VIRRIGKLRG FTRKKPFRRV FKGFGGFKGK VIPPGQHGLT KLLKTRPYDS
70 80 90 100 110 120
SESDYLIRLK VKQRLRFNYG ITERQLVNYV RKAKKIKEST GQVLLQFLEM RLDNIVFRLN
130 140 150 160 170 180
MAPTIPAARQ LISHGHIRVN NKKVNIPSYM CKPKDVISVA MKQRSLQLVN KNLQEYYRRM
190 200 210 220 230 240
RFYKKRLEKT LPFILLKIKP LGLTSVTAAV ELITKGNVRV NNKSVKTPNY ICRPRDTVSL
250
RTKQGIKKVF LKNYLKG