P47897
Gene name |
QARS1 |
Protein name |
Glutamine--tRNA ligase |
Names |
Glutaminyl-tRNA synthetase, GlnRS |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:5859 |
EC number |
6.1.1.18: Ligases forming aminoacyl-tRNA and related compounds |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
5 structures for P47897
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 4R3Z | X-ray | 403 A | C | 1-775 | PDB |
| 4YE6 | X-ray | 240 A | A | 1-775 | PDB |
| 4YE8 | X-ray | 330 A | A | 1-775 | PDB |
| 4YE9 | X-ray | 270 A | A | 1-775 | PDB |
| AF-P47897-F1 | Predicted | AlphaFoldDB |
730 variants for P47897
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs2042518770 RCV001231975 |
1 | M>T | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001212291 RCV002561783 rs1375795727 CA352724501 |
2 | A>T | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs748155291 CA2392346 RCV001056274 |
3 | A>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA74482270 RCV001227929 rs773096335 |
8 | S>L | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA2392339 RCV001522612 RCV000456406 rs62621067 |
9 | L>I | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001341517 rs1461865905 CA352724193 |
11 | T>S | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001324658 CA352724172 rs1333683203 |
12 | S>N | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV002531887 RCV000624033 rs1553752741 CA352724141 |
14 | G>S | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001372292 RCV000522052 rs1170759657 |
19 | K>missing | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001547476 CA2392328 RCV000526038 rs148998142 |
28 | A>D | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001223367 CA352723757 rs1221014964 CA352723745 RCV001226875 |
30 | S>R | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001061754 CA2392327 rs371969519 |
31 | A>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
RCV001064941 rs1261477095 CA352723655 |
34 | R>P | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1575404644 RCV001202373 |
36 | A>G | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001221097 RCV002254957 CA352723633 rs1575404644 COSM1193513 |
36 | A>V | lung Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar Ensembl dbSNP |
|
RCV001855344 CA2392290 RCV000655198 rs546520104 |
42 | Q>P | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs550717519 RCV002254956 RCV001217171 CA352723232 COSM1193514 |
43 | T>S | lung Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000698883 CA352723183 rs1559970954 |
44 | L>P | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs587777331 VAR_071189 RCV000114972 RCV000494584 CA214473 |
45 | G>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome MSCCA; results in reduced glutaminyl-tRNA aminoacylation activity; does not affect interaction with RARS1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
RCV001327504 CA352723131 rs1342775742 |
47 | T>I | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV002536404 rs201397059 RCV001585658 CA2392286 RCV000705908 |
48 | I>T | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
VAR_071190 rs587777333 CA214475 RCV000114974 |
57 | Y>H | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome MSCCA; results in reduced glutaminyl-tRNA aminoacylation activity; does not affect interaction with RARS1 [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt ExAC dbSNP gnomAD |
|
RCV001070309 CA352722679 rs1223986953 |
69 | L>F | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001225022 rs748894610 CA2392274 |
70 | S>F | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA352722638 RCV001224111 rs1362208293 |
72 | L>F | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs2042510780 RCV001212974 |
75 | Y>C | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs752251563 RCV001401405 CA2392271 |
77 | A>T | Variant assessed as Somatic; 0.0 impact. Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001039144 rs767410688 |
78 | S>G | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2042510350 RCV001067955 |
83 | T>I | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2042510074 RCV001239582 |
86 | Q>missing | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1483058377 RCV001299523 CA352722295 |
88 | S>R | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001342492 CA352721141 rs1205366710 |
93 | Y>H | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000536631 CA2392222 RCV000489200 rs147794116 |
99 | L>F | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002227163 RCV000498066 rs141983717 CA2392217 RCV000461879 |
106 | D>N | Global developmental delay Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001814309 CA352720647 CA74480945 COSM3824130 RCV001349447 rs201359259 |
107 | F>L | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome breast [ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001055282 CA2392213 rs767616063 RCV001508145 |
113 | V>M | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001501292 RCV003168904 rs530494890 RCV000459703 CA2392182 |
132 | R>T | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs142831772 RCV002462290 RCV001052794 CA2392179 |
134 | R>W | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001056062 CA74480464 rs896454620 |
140 | E>Q | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001230976 rs2042500119 |
142 | Y>* | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001557667 RCV001247979 rs201032950 CA2392148 |
154 | R>Q | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs766000850 CA2392149 RCV001232355 COSM267295 |
154 | R>W | Variant assessed as Somatic; 0.0 impact. large_intestine Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs776344968 CA2392144 RCV001265598 |
159 | W>* | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA352718660 rs1398173228 RCV000520099 RCV001339210 |
163 | K>E | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1158546093 RCV001326778 CA352718359 |
171 | M>I | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000521657 CA352716787 rs1346246672 RCV002528290 |
186 | E>G | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001315616 RCV000523568 RCV002528285 rs192040640 CA2392090 |
201 | R>Q | Variant assessed as Somatic; 0.0 impact. Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Inborn genetic diseases [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001584158 rs200703354 CA2392091 RCV000462966 |
201 | R>W | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs371204910 RCV001232806 CA74476904 |
203 | T>M | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA2392088 RCV002544812 RCV000688380 rs148374607 |
204 | A>T | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001038206 rs2042480502 |
208 | V>A | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1349950171 CA352715485 RCV001040122 |
222 | E>A | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000701185 rs750460731 CA2392063 |
223 | Q>R | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001521368 rs142517070 CA2392062 RCV000537546 |
225 | R>W | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs769241806 CA2392059 RCV001295474 |
226 | G>R | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001222775 rs2042475313 |
233 | K>N | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1248234116 RCV001243154 CA352715041 RCV001546574 |
233 | K>Q | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1553752233 CA352714776 RCV002534305 RCV000658960 |
241 | P>L | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs1037854666 CA74476328 RCV000707670 RCV001868316 |
257 | L>M | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001855343 rs779251239 CA2392027 RCV001281465 |
261 | G>R | Intellectual disability [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA74475994 RCV001298965 rs916890735 |
265 | R>H | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs1559968699 CA352714333 RCV001060691 |
265 | R>S | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs777675321 RCV001044950 CA2392003 |
267 | R>Q | Variant assessed as Somatic; 0.0 impact. Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001207975 CA2391998 rs200736711 |
273 | N>S | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs2042468624 RCV001344074 |
276 | L>P | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2042468435 RCV001245752 |
279 | G>R | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1370265763 RCV001797125 RCV000686178 CA352712508 |
301 | R>C | Variant assessed as Somatic; 0.0 impact. Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
rs746386543 RCV001304464 |
313 | K>Q | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA2391938 rs151217558 RCV001239357 |
316 | T>M | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs746002985 CA2391921 RCV001348394 |
326 | G>D | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs778484822 RCV001044647 |
335 | A>G | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA2391916 rs778484822 RCV001042547 |
335 | A>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001070505 rs1186557939 |
337 | D>missing | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001233262 rs2042453818 |
346 | A>T | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA2391908 RCV001545512 RCV001240864 rs763901654 |
351 | R>C | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001027994 CA352710825 rs752600100 |
353 | G>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001063435 CA352710816 rs1370961350 RCV001569572 |
354 | L>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs751537797 CA2391884 RCV001211409 |
361 | R>* | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs2042451493 RCV001296124 |
366 | K>R | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001299085 RCV003156113 rs185476065 RCV000735295 CA2391879 RCV001592938 |
378 | R>C | Insomnia Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs185476065 CA352710252 RCV001254913 |
378 | R>G | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001347640 rs2042451058 |
380 | M>R | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001069190 rs2042450960 |
382 | E>missing | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs899079673 RCV000466870 RCV000487819 CA16611312 |
387 | F>C | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs201842141 RCV001238137 CA74474565 |
388 | E>D | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA2391874 RCV000687971 rs777424712 |
388 | E>G | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA352709574 rs1559967769 RCV000694739 RCV001571716 |
390 | M>I | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000655191 RCV001592835 COSM1309251 CA2391845 rs143072084 |
399 | E>K | urinary_tract Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
COSM78384 CA2391842 RCV001064740 rs370681625 |
403 | R>Q | ovary Variant assessed as Somatic; 0.0 impact. large_intestine Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [Cosmic, NCI-TCGA, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV000114973 VAR_071191 COSM1423874 rs587777332 CA214474 |
403 | R>W | large_intestine Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome MSCCA; results in loss of glutaminyl-tRNA aminoacylation activity; impairs protein folding; does not interact with RARS1; results in reduced protein solubility [Cosmic, ClinVar, UniProt] | Yes |
ClinGen cosmic curated ClinVar UniProt ExAC TOPMed dbSNP gnomAD |
|
rs147076980 RCV000520706 RCV000655203 CA2391839 |
416 | V>I | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs772662033 CA2391838 RCV001305714 |
418 | Y>C | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000477590 rs746791896 CA2391833 |
423 | T>A | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs746114521 RCV001338009 CA2391828 |
427 | R>C | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001054718 rs148004466 CA2391827 RCV001540903 |
427 | R>H | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP |
|
RCV001070504 rs2042446400 |
429 | G>E | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs775652214 RCV001855342 RCV002534224 |
430 | D>missing | Inborn genetic diseases [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1559967530 RCV000691612 CA352708207 |
434 | I>T | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001045976 rs143462532 CA2391792 RCV001732024 |
435 | Y>C | Variant assessed as Somatic; 0.0 impact. Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001036990 rs1456791515 |
436 | P>L | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2042443898 RCV001213382 |
437 | T>S | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs2042443370 RCV001068321 |
448 | I>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs374178767 RCV000655184 CA74473619 |
463 | R>Q | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP TOPMed dbSNP gnomAD |
|
COSM1309250 rs141072684 RCV001346873 CA2391757 |
464 | R>C | Variant assessed as Somatic; 0.0 impact. urinary_tract Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA352706881 rs1575400316 RCV000851207 |
471 | C>Y | Attention deficit hyperactivity disorder [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs2042439830 RCV001347419 |
473 | A>P | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA2391750 rs144092780 RCV000464919 RCV001521138 |
476 | V>I | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1172486173 RCV000735296 CA352706571 RCV002535425 RCV003156114 |
477 | Y>C | Insomnia Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV000478623 rs1064795119 RCV002525873 |
484 | Y>missing | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs878854751 RCV000229402 CA10582197 |
485 | G>R | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001319604 CA352706234 rs1250051938 |
486 | R>H | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs2042438753 RCV001345405 |
496 | K>E | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001216242 rs2042438556 |
502 | L>R | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001319550 rs1287967203 CA352705747 |
503 | V>I | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs553194272 RCV000865891 CA2391738 RCV001510749 |
509 | R>W | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs2042436829 RCV001045855 |
510 | D>N | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000114975 CA214476 VAR_071192 RCV000437593 rs587777334 |
515 | R>W | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome MSCCA; results in loss of glutaminyl-tRNA aminoacylation activity; impairs protein folding; results in reduced protein solubility [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt TOPMed dbSNP gnomAD |
|
rs764216449 RCV000438114 CA2391708 RCV001238962 |
520 | T>M | Variant assessed as Somatic; 0.0 impact. Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001045315 CA2391707 rs756375405 |
521 | A>T | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs767667312 CA2391705 RCV000685922 RCV001861901 |
523 | R>* | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000657936 RCV001242568 CA2391704 rs201013732 |
523 | R>Q | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs1553751726 RCV000623160 CA352704941 RCV001303875 |
525 | R>W | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV000686869 CA352704878 rs1559967000 |
528 | P>S | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs373719958 CA2391700 RCV001545016 RCV002544874 RCV000690365 |
529 | P>S | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA2391696 RCV001664758 rs771579029 RCV001215072 |
536 | C>S | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs778807845 RCV001252759 CA2391694 RCV002549245 RCV001563017 RCV001208751 |
538 | R>Q | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Microcephaly Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001371134 CA2391695 rs201176263 RCV000712883 |
538 | R>W | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001038208 CA74472911 rs918156086 |
544 | A>T | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
rs1559966841 RCV000712885 CA352704043 RCV000692882 |
553 | L>Q | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
rs150328993 RCV001298524 CA2391677 |
558 | R>S | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA352703765 RCV001229589 rs1559966804 |
561 | L>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
RCV001066418 rs141184565 CA2391673 |
567 | R>* | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
TCGA novel rs1468382416 RCV001224133 |
567 | R>Q | Variant assessed as Somatic; impact. Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [NCI-TCGA, ClinVar] | Yes |
ClinVar NCI-TCGA dbSNP |
|
RCV001550562 CA2391670 RCV000518657 RCV000697150 rs755259427 |
571 | V>A | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs983282837 CA74472843 RCV001047721 |
576 | R>Q | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
CA2391668 COSM368143 rs780301490 RCV001312517 |
576 | R>W | lung Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs758929887 CA2391667 RCV001054182 |
578 | I>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs750907390 RCV000701814 CA2391666 |
580 | T>A | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV002562387 CA2391665 RCV001212925 rs777671697 |
581 | N>D | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV000484581 CA2391640 rs144563810 RCV001467022 |
587 | S>F | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA2391639 RCV000412870 RCV002523942 rs751191501 |
592 | V>L | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001220830 CA2391631 rs145548376 |
608 | F>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs757743183 RCV000998075 RCV000554317 CA2391626 RCV002527954 |
611 | I>S | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001308034 CA2391624 rs778303235 |
614 | I>T | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs758004160 RCV001341027 |
619 | F>L | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV000868287 RCV001522147 CA2391602 rs544950843 |
624 | E>Q | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC dbSNP gnomAD |
|
CA74472521 RCV001241122 COSM1485309 rs979330776 |
629 | R>C | Variant assessed as Somatic; impact. Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome breast [NCI-TCGA, ClinVar, Cosmic] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA TOPMed dbSNP |
|
RCV001040121 CA352700020 rs1396216642 |
643 | Y>C | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
rs770657741 RCV001346642 |
653 | G>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV002534225 rs748978904 RCV000655188 CA2391559 |
658 | V>L | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs2042421299 RCV001215309 |
660 | S>C | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001065856 CA2391557 rs755672487 |
660 | S>T | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
rs1037325022 CA74472415 RCV001062626 |
667 | R>Q | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
rs370587517 CA2391554 RCV000555248 |
667 | R>W | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
CA2391543 RCV001047364 RCV001759771 rs557972227 |
692 | Y>C | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV001228856 rs2042417727 |
698 | H>P | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA2391516 RCV001321053 rs527504481 |
704 | P>A | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
RCV000531286 RCV002527955 CA2391512 RCV001406324 rs142327602 |
708 | P>L | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome Inborn genetic diseases [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs760143907 RCV001343634 CA2391506 |
717 | L>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV001071304 rs2042415174 |
718 | A>P | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1332410993 CA352697706 RCV001063267 |
718 | A>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV000687001 rs781454677 CA2391487 |
722 | V>M | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001053388 rs2042414914 |
724 | D>H | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
RCV001216299 rs2042414825 |
725 | A>P | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
CA74472203 RCV000655192 rs913919560 |
725 | A>V | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001038101 rs772699618 CA2391477 |
737 | P>H | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs772699618 CA2391476 RCV000468826 |
737 | P>L | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV001325886 rs527864842 CA74472181 |
737 | P>T | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
RCV001759824 CA2391474 RCV001062871 rs749055007 COSM276971 |
739 | D>N | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA74472173 RCV000655193 rs925254000 |
740 | K>Q | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
RCV001070071 CA2391469 rs781617872 |
751 | V>M | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
RCV000655201 rs142480574 RCV001584513 CA2391464 |
754 | D>G | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
RCV001299499 CA2391447 rs746327492 |
764 | R>* | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
CA2391442 rs754648501 RCV000694182 |
771 | D>N | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
RCV002272418 rs762570876 RCV001221774 CA2391439 |
773 | G>R | Diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
rs988664245 CA74482299 |
2 | A>E | No |
ClinGen TOPMed |
|
|
CA74482284 RCV001861918 rs368809933 |
4 | L>P | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
CA352724429 rs768505058 |
4 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs747163409 CA2392343 |
6 | S>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA2392340 rs745939182 |
7 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs773096335 CA352724271 |
8 | S>* | No |
ClinGen TOPMed gnomAD |
|
|
CA352724188 rs1461865905 |
11 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA352724161 rs1396828595 |
12 | S>R | No |
ClinGen gnomAD |
|
|
rs1333683203 CA352724165 |
12 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
rs969067096 CA74482245 |
13 | L>F | No |
ClinGen TOPMed |
|
|
CA74482220 rs546130184 |
17 | E>* | No |
ClinGen 1000Genomes |
|
|
CA352723972 rs1422878993 |
19 | K>N | No |
ClinGen gnomAD |
|
|
CA352723953 rs1399543425 |
20 | A>V | No |
ClinGen TOPMed |
|
|
CA352723931 rs1299713566 |
21 | R>C | No |
ClinGen TOPMed |
|
|
CA74482194 rs112587654 |
23 | T>A | No |
ClinGen Ensembl |
|
|
CA2392333 rs753051563 |
23 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs762761920 CA2392331 |
24 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs760691722 CA2392330 |
25 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA352723844 rs1245336039 |
25 | K>R | No |
ClinGen gnomAD |
|
|
CA2392329 rs764855037 |
27 | S>A | No |
ClinGen ExAC gnomAD |
|
|
CA352723786 rs148998142 |
28 | A>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA352723792 rs1457710626 |
28 | A>P | No |
ClinGen gnomAD |
|
|
CA2392325 rs201606430 |
32 | Q>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2392323 rs199617865 |
33 | L>M | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA352723657 rs1316852653 |
34 | R>C | No |
ClinGen gnomAD |
|
|
CA352723656 rs1261477095 |
34 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
rs778895870 CA2392321 |
35 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs746101416 CA2392322 |
35 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA352723643 rs1331876498 |
36 | A>T | No |
ClinGen gnomAD |
|
|
rs1347407640 CA352723613 |
38 | T>N | No |
ClinGen TOPMed |
|
| TCGA novel | 39 | Q>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA2392320 rs771028235 |
39 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352723260 rs1242675709 |
42 | Q>H | No |
ClinGen gnomAD |
|
|
CA74481745 rs546520104 |
42 | Q>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs546520104 CA2392291 |
42 | Q>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs550717519 CA2392289 |
43 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2392287 rs752660207 RCV001865697 |
44 | L>M | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1466258007 CA352723159 |
46 | S>P | No |
ClinGen TOPMed gnomAD |
|
|
rs1559970922 CA352723083 |
50 | K>R | No |
ClinGen Ensembl |
|
|
CA2392285 rs755697141 |
51 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA2392284 rs371410194 |
52 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs763144605 CA2392283 |
53 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1161729877 CA352722951 |
57 | Y>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA74481649 rs199520568 |
58 | G>V | No |
ClinGen gnomAD |
|
|
CA352722871 rs748629167 |
59 | L>F | No |
ClinGen ExAC gnomAD |
|
|
RCV001865415 CA16611405 rs1060502307 |
62 | R>Q | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA2392278 rs540260992 |
63 | L>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA352722793 rs1244117414 |
64 | R>G | No |
ClinGen gnomAD |
|
|
rs1429201175 CA352722784 |
65 | D>N | No |
ClinGen Ensembl |
|
|
CA2392276 rs780618692 |
67 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1575404377 CA352722705 |
67 | R>P | No |
ClinGen Ensembl |
|
|
CA74481587 rs755738224 |
68 | R>C | No |
ClinGen Ensembl |
|
|
CA2392275 rs756873215 |
70 | S>P | No |
ClinGen ExAC gnomAD |
|
|
rs1370779774 CA352722542 |
76 | I>M | No |
ClinGen TOPMed |
|
|
rs755600734 CA2392272 |
76 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752251563 CA74481549 |
77 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1575404328 CA352722519 |
77 | A>V | No |
ClinGen Ensembl |
|
|
rs767410688 CA352722513 |
78 | S>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV001861916 CA2392270 rs767410688 |
78 | S>R | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA74481548 rs201545273 |
79 | K>T | No |
ClinGen Ensembl |
|
|
CA74481545 rs1018470866 |
80 | K>R | No |
ClinGen TOPMed |
|
|
CA352722397 rs1422194430 |
84 | E>G | No |
ClinGen gnomAD |
|
| TCGA novel | 85 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA352722388 rs1264945460 |
85 | P>T | No |
ClinGen TOPMed |
|
|
rs766102417 CA2392267 |
88 | S>I | No |
ClinGen ExAC gnomAD |
|
|
rs751342771 CA2392268 |
88 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352721208 rs1383799276 |
91 | L>R | No |
ClinGen TOPMed |
|
|
rs1429349583 CA352721214 |
91 | L>V | No |
ClinGen gnomAD |
|
|
CA352721149 rs1262090531 |
92 | E>D | No |
ClinGen gnomAD |
|
|
CA2392225 rs201997520 |
92 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA352721147 rs1205366710 |
93 | Y>N | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 95 | R>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA74481016 rs940624005 |
95 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 96 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1559970469 CA352721031 |
97 | H>Q | No |
ClinGen Ensembl |
|
|
CA352720944 rs1328170120 |
100 | D>H | No |
ClinGen TOPMed |
|
|
rs968955761 CA74481007 |
101 | P>H | No |
ClinGen TOPMed |
|
|
rs1553752618 CA352720892 |
101 | P>S | No |
ClinGen Ensembl |
|
|
rs1224863939 CA352720863 |
102 | I>T | No |
ClinGen gnomAD |
|
|
rs1216940990 CA352720869 |
102 | I>V | No |
ClinGen gnomAD |
|
|
CA2392219 rs550829561 |
103 | D>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs760155725 CA2392218 |
104 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2392216 rs142704391 COSM3824130 |
107 | F>L | breast [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs1028746179 CA74480917 |
108 | E>* | No |
ClinGen TOPMed |
|
|
CA74480933 rs1028746179 |
108 | E>K | No |
ClinGen TOPMed |
|
|
rs1028746179 CA352720642 |
108 | E>Q | No |
ClinGen TOPMed |
|
|
rs776294469 CA2392214 |
109 | R>Q | No |
ClinGen ExAC |
|
|
CA352720606 rs1429983136 |
109 | R>W | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA352720567 rs1177947963 |
110 | E>K | No |
ClinGen gnomAD |
|
|
rs779669893 CA2392211 |
116 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1404146549 CA352720420 |
116 | I>V | No |
ClinGen gnomAD |
|
|
CA352720339 rs1254471387 |
118 | T>S | No |
ClinGen gnomAD |
|
|
CA2392210 rs771895160 |
120 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA352720190 rs778805533 |
122 | I>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778805533 CA2392208 |
122 | I>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA2392207 rs757153129 |
123 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA2392205 rs778120776 |
125 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA2392184 rs749082327 |
126 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1444451939 CA352719932 |
128 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA2392183 rs777778390 |
130 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352719836 rs1411096191 |
131 | N>K | No |
ClinGen gnomAD |
|
|
CA352719849 rs1328932298 |
131 | N>Y | No |
ClinGen gnomAD |
|
|
rs142831772 CA2392180 |
134 | R>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs751676545 CA2392178 RCV001861903 |
134 | R>Q | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1234032225 CA352719669 |
137 | L>F | No |
ClinGen gnomAD |
|
|
CA352719606 rs1184621540 |
139 | V>L | No |
ClinGen gnomAD |
|
|
CA2392175 rs750778308 |
140 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2392174 rs765585957 |
141 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352719558 rs1293633518 |
141 | R>H | No |
ClinGen TOPMed gnomAD |
|
|
CA74480441 rs969280852 |
142 | Y>H | No |
ClinGen TOPMed |
|
|
rs760201207 CA2392173 |
143 | H>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352719375 rs1349703968 |
146 | M>I | No |
ClinGen gnomAD |
|
|
rs1444329639 CA352719302 |
149 | L>P | No |
ClinGen gnomAD |
|
|
CA2392172 rs775242736 |
150 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs1193578603 CA352719261 |
151 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
CA74480132 rs903995621 |
153 | A>V | No |
ClinGen Ensembl |
|
|
CA2392147 rs201032950 |
154 | R>P | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs769657593 CA352718943 |
155 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs769657593 CA2392146 |
155 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2392145 rs761645326 |
156 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA2392143 rs574588708 |
164 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs761573152 CA2392141 |
172 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
rs761573152 CA2392140 |
172 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
CA352717067 rs749772701 |
174 | L>F | No |
ClinGen ExAC gnomAD |
|
|
CA2392119 rs749772701 |
174 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA352717048 rs1451934818 |
175 | H>Y | No |
ClinGen gnomAD |
|
|
rs756577540 CA2392117 |
176 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs748563806 CA2392116 |
179 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA352716899 rs1052975324 |
180 | K>M | No |
ClinGen TOPMed gnomAD |
|
|
rs1052975324 CA74477190 |
180 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
CA352716858 rs1319296211 |
182 | E>Q | No |
ClinGen gnomAD |
|
|
CA352716835 rs1404191418 |
183 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
rs187135232 CA74477188 |
183 | A>T | No |
ClinGen 1000Genomes |
|
|
CA74477176 rs934517078 |
185 | L>M | No |
ClinGen TOPMed |
|
|
rs757156057 CA2392111 |
188 | K>* | No |
ClinGen ExAC gnomAD |
|
|
CA2392110 rs753737887 |
188 | K>M | No |
ClinGen ExAC gnomAD |
|
|
rs757156057 CA2392112 |
188 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1159031477 CA352716546 |
193 | K>N | No |
ClinGen TOPMed |
|
|
rs1372205704 CA352716567 |
193 | K>Q | No |
ClinGen gnomAD |
|
|
rs1241706645 RCV001865698 |
195 | R>* | No |
ClinVar dbSNP |
|
|
rs781731563 CA352716502 |
195 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2392095 rs781731563 |
195 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs928230861 CA74476967 |
195 | R>W | No |
ClinGen gnomAD |
|
|
CA352716498 rs1459142351 |
196 | L>I | No |
ClinGen TOPMed |
|
|
CA2392094 rs758054672 |
199 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1194206433 CA352716339 |
200 | D>A | No |
ClinGen gnomAD |
|
|
CA2392092 rs778433123 |
200 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA352716315 rs200703354 |
201 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA74476862 rs911977359 |
204 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1168096655 CA352716149 |
206 | D>A | No |
ClinGen gnomAD |
|
|
rs1395151997 CA352716157 |
206 | D>N | No |
ClinGen gnomAD |
|
|
rs1383738131 CA352716123 |
207 | V>E | No |
ClinGen gnomAD |
|
|
CA352716125 rs1431303110 |
207 | V>L | No |
ClinGen gnomAD |
|
|
CA352716056 rs1326922421 |
209 | E>D | No |
ClinGen TOPMed |
|
|
rs1287636642 CA352716063 |
209 | E>G | No |
ClinGen TOPMed |
|
|
CA2392086 rs767314630 |
210 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs774469871 CA2392084 |
210 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA352716022 rs1445751712 |
210 | N>S | No |
ClinGen gnomAD |
|
|
rs373350055 CA2392068 |
212 | E>K | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA352715762 rs1412447475 |
214 | A>P | No |
ClinGen TOPMed |
|
|
rs1050509805 CA74476640 |
215 | D>E | No |
ClinGen TOPMed |
|
|
CA2392067 rs754699919 |
215 | D>H | No |
ClinGen ExAC gnomAD |
|
|
RCV001861667 CA352715721 rs754699919 |
215 | D>Y | No |
ClinGen ClinVar ExAC dbSNP gnomAD |
|
|
CA352715646 rs1223507702 |
216 | Q>H | No |
ClinGen gnomAD |
|
|
rs751418967 CA2392066 |
217 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA352715588 rs1394908029 |
219 | S>A | No |
ClinGen TOPMed |
|
|
rs766497345 CA2392065 |
219 | S>C | No |
ClinGen ExAC |
|
|
CA352715407 rs1229637492 |
224 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
CA2392061 rs138456917 RCV001289160 |
225 | R>Q | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1316734963 CA352715351 |
226 | G>E | No |
ClinGen TOPMed gnomAD |
|
|
CA74476583 rs866582768 |
227 | E>G | No |
ClinGen Ensembl |
|
| rs772343264 | 227 | E>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA352715327 rs1386391167 |
227 | E>Q | No |
ClinGen gnomAD |
|
| rs772343264 | 227 | E>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1428722807 CA352715155 |
230 | K>Q | No |
ClinGen gnomAD |
|
|
CA2392056 rs775993574 |
232 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA352715026 rs1386442359 |
234 | P>T | No |
ClinGen gnomAD |
|
|
CA352714913 rs1313459267 |
236 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1277563030 CA352714859 |
237 | N>I | No |
ClinGen TOPMed |
|
|
CA2392036 rs772821386 |
237 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA352714832 rs1213661231 |
238 | Y>C | No |
ClinGen gnomAD |
|
|
CA74476372 rs868100040 |
241 | P>S | No |
ClinGen TOPMed |
|
|
CA352714768 rs1451089279 |
242 | G>D | No |
ClinGen TOPMed gnomAD |
|
|
rs747643106 CA2392034 |
242 | G>S | No |
ClinGen ExAC gnomAD |
|
|
CA352714760 rs1451089279 |
242 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
CA352714734 rs1382773391 |
244 | V>L | No |
ClinGen gnomAD |
|
|
CA352714722 rs1490441529 |
245 | V>A | No |
ClinGen gnomAD |
|
|
CA74476361 rs374197799 |
246 | T>I | No |
ClinGen ESP TOPMed |
|
|
rs371477009 CA2392033 |
247 | P>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA74476346 rs576857090 |
248 | H>Y | No |
ClinGen 1000Genomes |
|
|
rs1410787584 CA352714644 |
250 | M>V | No |
ClinGen gnomAD |
|
|
CA352714616 rs1390522458 |
251 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA2392030 rs779660591 |
256 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs758295796 CA2392029 |
258 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA352714459 rs1559968834 |
260 | T>I | No |
ClinGen Ensembl |
|
|
rs757623325 CA2392026 |
261 | G>A | No |
ClinGen ExAC gnomAD |
|
|
rs1575402094 CA352714319 |
266 | T>P | No |
ClinGen Ensembl |
|
|
rs777675321 CA74475987 |
267 | R>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs749551140 CA2392004 |
267 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1158340438 CA352714279 |
269 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
rs756187773 CA2392002 |
269 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs768056251 CA2392000 |
270 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352714259 rs1575402066 |
271 | E>G | No |
ClinGen Ensembl |
|
|
CA352714236 rs1366554899 |
272 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
CA74475959 rs200736711 |
273 | N>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA2391995 rs753555653 |
278 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA2391994 rs763689986 |
281 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1559968630 CA352714051 |
282 | K>R | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA352714034 rs1261395178 |
283 | A>S | No |
ClinGen gnomAD |
|
|
CA352713991 rs11539148 |
285 | N>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
RCV002062289 rs11539148 RCV000424979 CA2391993 |
285 | N>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1307590384 RCV001508144 CA352713965 |
286 | F>L | No |
ClinGen ClinVar TOPMed dbSNP |
|
|
rs1243944923 CA352713906 |
290 | Y>C | No |
ClinGen TOPMed |
|
|
CA2391951 rs751172766 |
293 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs762805367 CA2391949 |
294 | N>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766338397 CA2391950 |
294 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs540036773 CA2391948 |
295 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
RCV000522110 CA352712781 rs540036773 |
295 | N>T | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA352712640 rs1163160268 |
297 | I>M | No |
ClinGen gnomAD |
|
|
rs1333540392 CA352712643 |
297 | I>S | No |
ClinGen TOPMed |
|
|
CA74475187 rs962335441 |
297 | I>V | No |
ClinGen TOPMed |
|
|
CA2391946 rs762054345 |
299 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs1553752019 RCV001858064 COSM584033 CA352712501 |
301 | R>H | lung large_intestine Variant assessed as Somatic; impact. endometrium [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ClinVar Ensembl NCI-TCGA dbSNP |
|
rs1306938303 CA352712314 |
307 | P>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1472312290 CA352712330 |
307 | P>S | No |
ClinGen gnomAD |
|
|
CA2391944 rs538322353 |
308 | E>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1483886839 CA352712249 |
309 | K>E | No |
ClinGen gnomAD |
|
|
rs772575870 CA2391941 |
312 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA2391940 rs746386543 |
313 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1349369157 CA352711979 |
315 | F>C | No |
ClinGen gnomAD |
|
|
CA2391939 rs779300608 |
315 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1277271533 CA352711956 |
316 | T>P | No |
ClinGen TOPMed |
|
|
CA74475118 rs867275185 |
317 | A>S | No |
ClinGen TOPMed |
|
|
rs867275185 CA352711936 |
317 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA74475105 rs937293445 |
318 | I>N | No |
ClinGen TOPMed gnomAD |
|
|
CA2391935 rs567808853 |
321 | M>T | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1559968143 CA352711748 |
321 | M>V | No |
ClinGen Ensembl |
|
|
rs1435075957 CA352711473 |
327 | Y>H | No |
ClinGen gnomAD |
|
|
CA2391919 rs771525979 |
331 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs1178195058 CA352711258 |
333 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA2391918 rs749665915 |
334 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA352711252 rs1469995048 |
334 | Y>H | No |
ClinGen TOPMed gnomAD |
|
|
CA352711219 rs1251179693 |
336 | S>T | No |
ClinGen gnomAD |
|
|
CA352711192 rs1174267054 |
338 | Y>F | No |
ClinGen TOPMed |
|
|
CA352711177 rs1248091156 |
340 | D>N | No |
ClinGen gnomAD |
|
|
CA352711153 rs1460899898 |
341 | Q>R | No |
ClinGen TOPMed |
|
|
rs148533374 CA74474917 |
343 | Y>H | No |
ClinGen ESP |
|
|
CA352711087 rs1209992432 |
344 | A>P | No |
ClinGen gnomAD |
|
|
COSM190495 rs749995144 CA2391912 |
344 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA352711058 rs1347552948 |
345 | W>* | No |
ClinGen gnomAD |
|
|
rs1219473152 CA352711068 |
345 | W>R | No |
ClinGen gnomAD |
|
|
rs757249021 CA2391910 |
347 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA74474887 rs984591523 |
349 | L>V | No |
ClinGen Ensembl |
|
|
rs893113155 CA74474883 |
350 | I>S | No |
ClinGen Ensembl |
|
|
CA352710951 COSM1046031 rs1450459883 |
351 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA2391887 rs752600100 |
353 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA2391888 rs755884179 |
353 | G>S | No |
ClinGen ExAC |
|
|
CA352710787 rs1170391746 |
355 | A>V | No |
ClinGen gnomAD |
|
|
CA2391885 rs759809999 |
357 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA2391886 rs767628964 |
357 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA352710719 rs1473503861 |
358 | C>W | No |
ClinGen gnomAD |
|
|
CA2391883 rs766590522 |
361 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs763512186 CA2391882 |
362 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352710532 rs1391292145 |
365 | L>F | No |
ClinGen gnomAD |
|
|
CA74474665 rs962759884 |
365 | L>P | No |
ClinGen gnomAD |
|
|
rs1219996043 CA352710452 |
369 | N>I | No |
ClinGen gnomAD |
|
|
CA74474631 rs147332278 |
372 | P>S | No |
ClinGen ESP TOPMed |
|
|
rs1380081309 CA352710355 |
374 | P>L | No |
ClinGen TOPMed |
|
|
CA352710366 rs1360650190 |
374 | P>S | No |
ClinGen TOPMed |
|
|
rs1291230207 CA352710323 |
375 | W>* | No |
ClinGen gnomAD |
|
|
CA2391878 rs777116688 |
378 | R>H | No |
ClinGen ExAC gnomAD |
|
|
rs185476065 CA74474609 |
378 | R>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1410720009 CA352710241 |
379 | P>S | No |
ClinGen gnomAD |
|
|
CA352710155 rs1350852240 |
381 | E>K | No |
ClinGen gnomAD |
|
|
rs774390158 CA74474577 |
383 | S>A | No |
ClinGen Ensembl |
|
|
rs1001806893 CA74474574 |
383 | S>L | No |
ClinGen TOPMed |
|
|
CA352709956 rs1291156079 |
386 | L>F | No |
ClinGen TOPMed |
|
|
CA352709926 rs899079673 |
387 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
CA2391875 rs749042622 |
388 | E>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1046030 CA2391850 rs554429440 |
391 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA2391849 rs746827969 COSM1046029 |
391 | R>H | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA352709473 rs1160898871 |
393 | G>V | No |
ClinGen TOPMed |
|
|
rs780409899 CA2391848 |
394 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA352709371 rs1236386438 |
396 | S>L | No |
ClinGen TOPMed gnomAD |
|
|
rs758759632 CA2391847 |
397 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1386524025 CA352709264 |
400 | A>D | No |
ClinGen gnomAD |
|
|
rs775904786 CA2391841 |
404 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs907202044 CA74474318 |
405 | K>* | No |
ClinGen Ensembl |
|
|
CA352709031 rs1390028553 |
409 | E>G | No |
ClinGen gnomAD |
|
|
CA2391840 rs765950058 |
411 | G>S | No |
ClinGen ExAC gnomAD |
|
|
rs1045641743 CA74474311 |
413 | M>R | No |
ClinGen TOPMed |
|
|
CA352708838 rs1045641743 |
413 | M>T | No |
ClinGen TOPMed |
|
|
rs1575400845 CA352708810 |
414 | D>A | No |
ClinGen Ensembl |
|
|
CA352708811 rs1430336797 |
414 | D>Y | No |
ClinGen gnomAD |
|
|
rs769378726 CA2391837 |
419 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2391835 rs538483140 |
419 | R>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA2391836 rs538483140 |
419 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA352708630 rs1352173321 |
422 | Y>C | No |
ClinGen gnomAD |
|
|
rs918533004 CA74474255 |
424 | P>A | No |
ClinGen TOPMed gnomAD |
|
|
rs918533004 CA74474251 |
424 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
CA2391830 rs772362130 |
425 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1402402195 CA352708526 |
426 | H>D | No |
ClinGen TOPMed gnomAD |
|
|
CA352708529 rs1402402195 |
426 | H>N | No |
ClinGen TOPMed gnomAD |
|
|
CA352708458 rs1428175641 |
428 | T>I | No |
ClinGen gnomAD |
|
|
rs753924453 CA352708388 |
430 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753924453 CA2391824 |
430 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2391823 rs778340693 |
431 | K>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2391822 rs756584384 |
432 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA352708180 rs1456791515 |
436 | P>H | No |
ClinGen gnomAD |
|
|
rs1294643628 RCV000498206 CA352708137 |
438 | Y>* | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
CA74473828 rs1020521977 |
438 | Y>C | No |
ClinGen TOPMed |
|
|
COSM190493 CA74473840 rs899025964 |
438 | Y>H | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs764347049 CA74473817 |
439 | D>N | No |
ClinGen TOPMed |
|
|
CA352708045 rs1223834136 |
440 | Y>C | No |
ClinGen gnomAD |
|
|
rs759401412 CA2391789 |
441 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs771127174 CA2391787 |
443 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA2391785 rs769757389 |
445 | C>* | No |
ClinGen ExAC gnomAD |
|
|
rs551512975 CA74473719 |
446 | D>G | No |
ClinGen 1000Genomes |
|
|
COSM1046028 CA74473709 rs957599864 |
449 | E>K | Variant assessed as Somatic; 0.0 impact. large_intestine endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs769836405 CA2391783 |
450 | H>Y | No |
ClinGen ExAC |
|
|
CA2391776 rs780291852 |
457 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs376599645 CA2391775 |
459 | E>K | No |
ClinGen ESP ExAC gnomAD |
|
|
CA2391774 rs753464195 |
460 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA74473659 rs1034806136 |
461 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
rs763877937 CA2391773 |
462 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs373289986 CA74473632 |
462 | A>V | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs755674457 CA2391772 RCV001858060 |
463 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs549522450 CA2391756 |
464 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 464 | R>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1368856009 CA352707037 |
465 | S>F | No |
ClinGen TOPMed |
|
|
rs267599865 CA352707024 |
466 | S>C | No |
ClinGen gnomAD |
|
|
CA74473456 rs267599865 |
466 | S>F | No |
ClinGen gnomAD |
|
|
rs1559967310 CA352707002 |
467 | Y>* | No |
ClinGen Ensembl |
|
|
rs752198497 CA2391753 |
469 | W>C | No |
ClinGen ExAC gnomAD |
|
|
rs933017250 CA74473441 |
470 | L>F | No |
ClinGen TOPMed gnomAD |
|
|
CA352706893 rs1559967291 |
470 | L>P | No |
ClinGen Ensembl |
|
|
CA74473432 rs941153059 |
472 | N>D | No |
ClinGen Ensembl |
|
|
CA352706793 rs1416895710 |
472 | N>I | No |
ClinGen gnomAD |
|
|
rs1064797070 CA352706721 |
473 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA16617989 RCV000481762 rs1064797070 |
473 | A>V | No |
ClinGen ClinVar TOPMed dbSNP gnomAD |
|
|
rs754909328 CA2391751 |
474 | L>V | No |
ClinGen ExAC gnomAD |
|
|
rs1367183765 CA352706680 |
475 | D>H | No |
ClinGen gnomAD |
|
|
rs1049916467 CA74473428 |
477 | Y>H | No |
ClinGen Ensembl |
|
|
rs766391690 CA2391749 |
479 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352706462 rs1241337787 |
481 | Q>* | No |
ClinGen Ensembl |
|
|
CA352706282 rs762645121 |
484 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs750282631 CA2391747 |
486 | R>C | No |
ClinGen ExAC gnomAD |
|
|
rs936828606 CA74473367 |
488 | N>S | No |
ClinGen TOPMed |
|
|
CA2391746 rs765374604 |
490 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA2391745 rs762033221 |
491 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
CA16611310 rs1060502308 RCV001865416 |
493 | V>D | No |
ClinGen ClinVar Ensembl dbSNP |
|
|
CA2391743 rs768754604 |
495 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1273961058 CA352705923 |
497 | R>T | No |
ClinGen gnomAD |
|
|
CA2391742 rs760849163 |
499 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA74473349 rs945078330 |
501 | Q>P | No |
ClinGen Ensembl |
|
|
rs1240158027 CA352705702 |
505 | T>A | No |
ClinGen TOPMed |
|
|
rs772704640 CA2391740 |
505 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs746153912 CA2391739 |
506 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA2391737 RCV001858061 rs769522516 |
509 | R>Q | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA352705338 rs1196079818 |
514 | P>L | No |
ClinGen gnomAD |
|
|
RCV001861668 CA2391710 rs377454880 |
515 | R>Q | No |
ClinGen ClinVar ESP ExAC dbSNP gnomAD |
|
|
rs764216449 CA2391709 |
520 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2391702 rs767053528 |
524 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2391703 rs774980346 RCV000415807 |
524 | R>W | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
rs1363549666 CA352704926 |
525 | R>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA352704929 rs1363549666 |
525 | R>Q | No |
ClinGen gnomAD |
|
|
rs768134087 CA2391699 |
530 | E>Q | No |
ClinGen ExAC gnomAD |
|
|
CA74473008 rs773994067 |
531 | A>D | No |
ClinGen gnomAD |
|
|
rs769641391 CA2391698 |
531 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA2391697 rs774819969 |
532 | I>M | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 532 | I>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA74473002 rs531336216 |
533 | N>K | No |
ClinGen Ensembl |
|
|
CA74472982 rs1042158369 |
534 | N>H | No |
ClinGen Ensembl |
|
|
CA352704633 rs1455687990 |
535 | F>L | No |
ClinGen TOPMed |
|
|
RCV001861669 rs1553751717 |
538 | R>missing | No |
ClinVar dbSNP |
|
|
rs1189734887 CA352704179 |
547 | T>A | No |
ClinGen gnomAD |
|
|
CA2391684 rs763565296 |
547 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs961339434 CA74472900 |
548 | M>T | No |
ClinGen TOPMed |
|
|
CA352704162 rs1196352302 |
548 | M>V | No |
ClinGen gnomAD |
|
|
rs773398354 CA2391683 |
549 | E>G | No |
ClinGen ExAC gnomAD |
|
|
rs765660706 CA2391682 |
550 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs775185486 CA2391680 |
551 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA74472891 rs574307111 |
554 | E>D | No |
ClinGen 1000Genomes |
|
|
rs1294758889 CA352703995 |
555 | A>G | No |
ClinGen gnomAD |
|
|
rs879232053 CA74472888 |
556 | C>S | No |
ClinGen Ensembl |
|
|
rs1415130029 CA352703911 |
557 | V>M | No |
ClinGen TOPMed |
|
|
rs150328993 CA2391676 |
558 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749254902 CA2391675 |
558 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 558 | R>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 563 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs974143738 CA74472865 |
563 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1559966797 RCV001861919 |
564 | T>missing | No |
ClinVar dbSNP |
|
|
CA2391674 rs777611930 |
566 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs141184565 CA2391672 |
567 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1468382416 CA352703565 |
567 | R>P | No |
ClinGen gnomAD |
|
|
rs1182421210 CA352703540 |
569 | M>V | No |
ClinGen gnomAD |
|
|
CA352703449 rs755259427 |
571 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781475272 CA2391671 |
571 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA352703442 rs1559966768 |
572 | L>V | No |
ClinGen Ensembl |
|
|
rs1291215376 CA352703413 |
573 | E>G | No |
ClinGen TOPMed |
|
|
rs1468553612 CA352703384 |
575 | L>V | No |
ClinGen gnomAD |
|
|
CA74472835 rs748878219 |
579 | I>T | No |
ClinGen Ensembl |
|
|
CA352702007 rs1280577753 |
579 | I>V | No |
ClinGen gnomAD |
|
|
rs762223639 CA352701886 |
582 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA74472818 rs867222540 |
583 | P>L | No |
ClinGen Ensembl |
|
|
rs889695838 CA74472821 |
583 | P>T | No |
ClinGen TOPMed |
|
|
CA352701832 rs1441681467 |
585 | A>T | No |
ClinGen gnomAD |
|
|
CA352701581 rs1204185581 |
590 | I>M | No |
ClinGen TOPMed |
|
|
rs923115953 CA74472699 |
593 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA2391637 rs372524045 |
594 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372524045 CA2391638 RCV001861914 |
594 | N>T | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA2391636 rs148882908 |
596 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1271518024 CA352701463 |
596 | P>S | No |
ClinGen gnomAD |
|
|
CA2391634 rs761674829 |
597 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776523307 CA2391633 |
599 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs768537533 CA2391632 |
601 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA352701282 rs972789446 |
602 | G>A | No |
ClinGen TOPMed gnomAD |
|
|
CA74472678 rs972789446 |
602 | G>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1415189676 CA352701130 |
607 | P>L | No |
ClinGen gnomAD |
|
|
rs62621222 RCV001509219 CA2391630 |
609 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs909987369 CA74472657 |
609 | A>V | No |
ClinGen Ensembl |
|
|
rs201757914 CA2391628 |
610 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs757743183 CA2391627 |
611 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1169271940 CA352701002 |
611 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
CA352700959 rs1416719790 |
612 | V>A | No |
ClinGen gnomAD |
|
| TCGA novel | 613 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs756458504 CA2391623 |
614 | I>M | No |
ClinGen ExAC gnomAD |
|
|
COSM292200 CA2391625 rs749765066 |
614 | I>V | large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA2391622 rs571159624 |
615 | E>D | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA gnomAD |
|
rs1275271200 CA352700861 |
617 | T>N | No |
ClinGen gnomAD |
|
|
rs1275271200 CA352700859 |
617 | T>S | No |
ClinGen gnomAD |
|
|
rs1294163804 CA352700778 |
619 | F>C | No |
ClinGen TOPMed gnomAD |
|
|
CA352700783 rs1294163804 |
619 | F>S | No |
ClinGen TOPMed gnomAD |
|
|
rs758004160 CA2391620 |
619 | F>V | No |
ClinGen ExAC gnomAD |
|
|
CA352700748 rs1356055816 |
620 | K>R | No |
ClinGen Ensembl |
|
|
rs1401677250 CA352700572 |
622 | E>K | No |
ClinGen gnomAD |
|
|
CA352700520 rs1410755718 |
623 | P>L | No |
ClinGen TOPMed gnomAD |
|
|
CA352700484 rs1484977972 |
625 | P>Q | No |
ClinGen gnomAD |
|
|
rs758025209 CA352700458 CA2391599 |
626 | G>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM163875 CA352700424 rs1317330890 |
627 | F>L | breast [Cosmic] | No |
ClinGen cosmic curated TOPMed gnomAD |
|
rs750008591 CA2391598 |
627 | F>S | No |
ClinGen ExAC gnomAD |
|
|
CA2391596 rs139730889 RCV001861671 |
629 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
rs753463624 CA2391595 |
632 | W>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753463624 CA352700289 |
632 | W>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1575399265 CA352700299 |
632 | W>G | No |
ClinGen Ensembl |
|
|
rs1287960174 CA352700257 |
634 | Q>* | No |
ClinGen gnomAD |
|
|
rs1431896699 CA352700234 |
634 | Q>H | No |
ClinGen gnomAD |
|
|
rs1469844418 CA352700225 |
635 | P>S | No |
ClinGen TOPMed |
|
|
rs1362904365 CA352700085 |
641 | T>A | No |
ClinGen gnomAD |
|
|
CA2391592 rs775375268 |
644 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs767187216 CA2391591 |
645 | I>T | No |
ClinGen ExAC gnomAD |
|
|
CA2391590 rs370397423 |
646 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs774424848 CA2391589 |
647 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2391587 rs145343705 |
648 | Q>H | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1009235138 CA74472504 |
649 | H>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA2391586 rs773296739 |
651 | V>I | No |
ClinGen ExAC gnomAD |
|
|
CA352699831 rs1305301786 |
652 | K>R | No |
ClinGen gnomAD |
|
|
CA74472432 COSM1538244 rs1013287948 |
653 | G>C | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated Ensembl NCI-TCGA |
|
rs770657741 COSM1423871 RCV000658959 CA2391560 |
653 | G>D | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
CA74472427 rs865998076 |
655 | S>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1298749529 CA352699634 |
656 | G>V | No |
ClinGen gnomAD |
|
|
CA2391558 rs777618796 |
658 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs1260177795 CA352699546 |
660 | S>R | No |
ClinGen TOPMed |
|
|
rs1458391724 CA352699540 |
661 | L>M | No |
ClinGen TOPMed |
|
|
CA352699490 rs1575399028 |
663 | V>G | No |
ClinGen Ensembl |
|
|
rs752320395 CA2391556 |
663 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs140225766 CA2391555 |
664 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1575399021 CA352699417 |
665 | C>* | No |
ClinGen Ensembl |
|
|
rs1249750231 CA352699410 RCV001861904 |
666 | R>I | No |
ClinGen ClinVar dbSNP gnomAD |
|
|
rs374312387 CA2391553 |
668 | A>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs756380392 CA74472407 |
673 | K>M | No |
ClinGen Ensembl |
|
|
CA352699269 rs766197862 |
674 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA2391552 rs766197862 |
674 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA352699202 rs1212733559 |
676 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA352699201 rs1212733559 |
676 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1333307946 CA352699178 |
677 | F>C | No |
ClinGen Ensembl |
|
|
CA74472401 rs142441496 |
678 | I>T | No |
ClinGen ESP |
|
|
rs1559966086 CA352699041 |
681 | V>A | No |
ClinGen Ensembl |
|
|
CA352698932 rs765497781 CA2391549 |
686 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352698895 rs1335625299 |
687 | C>Y | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA352698863 rs1368936063 |
689 | V>I | No |
ClinGen gnomAD |
|
|
rs370934093 RCV000416268 CA2391546 |
690 | R>C | No |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
|
RCV001756110 rs201781920 CA2391545 |
690 | R>H | No |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
|
rs201781920 CA74472386 |
690 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs778797651 CA74472383 |
691 | L>F | No |
ClinGen Ensembl |
|
|
CA74472379 rs921379455 |
692 | Y>H | No |
ClinGen Ensembl |
|
|
rs746293241 CA2391542 COSM1423870 |
694 | R>* | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA352698755 rs772994973 |
694 | R>P | No |
ClinGen ExAC gnomAD |
|
|
CA2391541 rs772994973 |
694 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA2391540 rs376482152 |
695 | L>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1298512218 CA352698524 |
698 | H>Q | No |
ClinGen gnomAD |
|
|
CA74472295 rs369669069 |
698 | H>Y | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA352698410 rs746554229 |
701 | P>A | No |
ClinGen ExAC gnomAD |
|
|
CA2391517 rs746554229 |
701 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA352698388 rs1414509657 |
702 | E>G | No |
ClinGen gnomAD |
|
|
rs1165789955 CA352698354 |
704 | P>L | No |
ClinGen gnomAD |
|
|
CA2391515 rs527504481 |
704 | P>T | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA352698294 rs1474841324 |
706 | E>V | No |
ClinGen TOPMed gnomAD |
|
|
CA2391514 rs778699748 |
708 | P>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs778699748 CA2391513 |
708 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA2391511 rs754059664 |
709 | G>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 712 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA352698046 rs1575398734 |
713 | S>R | No |
ClinGen Ensembl |
|
|
CA2391509 rs756214242 |
713 | S>T | No |
ClinGen ExAC gnomAD |
|
|
CA2391508 rs752830145 |
714 | D>E | No |
ClinGen ExAC gnomAD |
|
|
CA74472269 rs373642539 |
716 | N>S | No |
ClinGen Ensembl |
|
|
rs781454677 CA352697629 |
722 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1432543651 CA352697593 |
723 | V>A | No |
ClinGen TOPMed |
|
|
rs368078728 CA74472200 |
726 | A>T | No |
ClinGen ESP TOPMed |
|
|
rs980893506 CA74472197 |
727 | L>* | No |
ClinGen TOPMed |
|
|
rs1398390958 CA352697454 |
728 | V>L | No |
ClinGen TOPMed |
|
| TCGA novel | 729 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs562453484 CA2391482 |
731 | S>C | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs532922380 CA2391483 |
731 | S>P | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
RCV001856804 rs763741745 CA2391481 |
732 | V>A | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA74472193 rs374208427 |
732 | V>M | No |
ClinGen ESP TOPMed |
|
|
rs1407459744 CA352697237 |
733 | A>G | No |
ClinGen gnomAD |
|
|
CA2391479 rs150380021 |
734 | L>R | No |
ClinGen ESP ExAC |
|
|
CA352697191 rs1158532613 |
735 | A>T | No |
ClinGen gnomAD |
|
| TCGA novel | 736 | K>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749055007 RCV001861902 CA352697005 |
739 | D>Y | No |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
|
CA352696978 CA352696974 rs777452461 |
740 | K>N | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 741 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA352696959 rs1282040984 |
741 | F>L | No |
ClinGen TOPMed gnomAD |
|
|
CA352696967 rs1323325877 |
741 | F>L | No |
ClinGen gnomAD |
|
|
CA352696966 rs1323325877 |
741 | F>V | No |
ClinGen gnomAD |
|
|
CA352696929 rs1239412542 |
742 | Q>* | No |
ClinGen gnomAD |
|
|
rs370685207 CA74472167 CA352696904 |
742 | Q>H | No |
ClinGen ESP TOPMed |
|
|
rs1488099449 CA352696897 |
743 | F>L | No |
ClinGen TOPMed |
|
|
CA352696869 rs1353791428 |
743 | F>S | No |
ClinGen gnomAD |
|
|
CA352696803 rs1234673016 |
745 | R>C | No |
ClinGen gnomAD |
|
|
rs770019480 CA2391471 |
745 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352696653 rs1293778465 |
750 | S>F | No |
ClinGen gnomAD |
|
|
rs755099989 CA2391468 |
751 | V>A | No |
ClinGen ExAC gnomAD |
|
|
rs780539823 CA2391466 |
752 | D>V | No |
ClinGen ExAC |
|
|
rs142480574 CA2391465 |
754 | D>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA2391462 rs762203649 |
755 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs1559965636 CA352696498 |
756 | H>R | No |
ClinGen Ensembl |
|
|
CA352696470 rs1426097729 |
757 | Q>R | No |
ClinGen gnomAD |
|
|
rs1324687960 CA352696402 |
759 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs780017791 CA2391449 |
760 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA2391448 rs758895480 |
761 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA352695158 rs1219604039 |
762 | F>S | No |
ClinGen gnomAD |
|
|
CA74471438 rs960768621 |
763 | N>Y | No |
ClinGen Ensembl |
|
|
rs1291965738 COSM190488 CA352695091 |
764 | R>Q | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs779522277 CA2391446 |
766 | V>A | No |
ClinGen ExAC gnomAD |
|
|
CA352694983 rs1171701223 |
769 | K>R | No |
ClinGen gnomAD |
|
|
rs1465926273 CA352694969 |
770 | E>D | No |
ClinGen gnomAD |
|
|
CA352694963 rs1388810452 |
771 | D>A | No |
ClinGen TOPMed |
|
|
rs765773382 CA2391440 |
772 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs1256807971 CA352694934 |
772 | P>L | No |
ClinGen gnomAD |
|
|
CA352694943 rs765773382 |
772 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs373300144 CA2391438 |
774 | K>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1198954154 CA352694907 |
774 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs765329131 CA2391437 |
776 | V>S | No |
ClinGen ExAC gnomAD |
1 associated diseases with P47897
[MIM: 615760]: Microcephaly, progressive, with seizures and cerebral and cerebellar atrophy (MSCCA)
A severe, autosomal recessive, neurodevelopmental and neurodegenerative disorder characterized by progressive microcephaly, severe seizures in infancy, atrophy of the cerebral cortex and cerebellar vermis, and mild atrophy of the cerebellar hemispheres, resulting in profoundly delayed development and hypotonia. {ECO:0000269|PubMed:24656866, ECO:0000269|PubMed:26869582}. Note=The disease is caused by variants affecting the gene represented in this entry.
Without disease ID
- A severe, autosomal recessive, neurodevelopmental and neurodegenerative disorder characterized by progressive microcephaly, severe seizures in infancy, atrophy of the cerebral cortex and cerebellar vermis, and mild atrophy of the cerebellar hemispheres, resulting in profoundly delayed development and hypotonia. {ECO:0000269|PubMed:24656866, ECO:0000269|PubMed:26869582}. Note=The disease is caused by variants affecting the gene represented in this entry.
5 regional properties for P47897
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| conserved_site | Aminoacyl-tRNA synthetase, class I, conserved site | 270 - 281 | IPR001412 |
| domain | Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain 2 | 165 - 254 | IPR007638 |
| domain | Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal | 7 - 162 | IPR007639 |
| domain | Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain | 263 - 562 | IPR020058 |
| domain | Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain | 565 - 752 | IPR020059 |
Functions
| Description | ||
|---|---|---|
| EC Number | 6.1.1.18 | Ligases forming aminoacyl-tRNA and related compounds |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
5 GO annotations of cellular component
| Name | Definition |
|---|---|
| aminoacyl-tRNA synthetase multienzyme complex | A multienzyme complex found in all multicellular eukaryotes composed of eight proteins with aminoacyl-tRNA synthetase activities (abbreviated as: ArgRS, AspRS, GluProRS, GlnRS, IleRS, LeuRS, LysRS, MetRS where RS is the enzyme, preceded by the amino acid it uses as a substrate) as well as three non-synthetase proteins (p43, p38, and p18) with diverse functions. Several of these subunits are known dimers, so the total polypeptide count in the multisynthetase complex is at least fifteen. All of the enzymes in this assembly catalyze the same reaction, the covalent attachment of an amino acid to either the 2'- or 3'-hydroxyl of the 3'-terminal adenosine of tRNA, but using different substrates. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| mitochondrial matrix | The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation. |
| protein-containing complex | A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| glutamine-tRNA ligase activity | Catalysis of the reaction: ATP + L-glutamine + tRNA(Gln) = AMP + diphosphate + L-glutaminyl-tRNA(Gln). |
| protein kinase binding | Binding to a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate. |
| protein kinase inhibitor activity | Binds to and stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein. |
7 GO annotations of biological process
| Name | Definition |
|---|---|
| brain development | The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.). |
| glutaminyl-tRNA aminoacylation | The process of coupling glutamine to glutaminyl-tRNA, catalyzed by glutaminyl-tRNA synthetase. The glutaminyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a glutamine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification. |
| negative regulation of apoptotic signaling pathway | Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic signaling pathway. |
| negative regulation of DNA-templated transcription | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
| negative regulation of protein kinase activity | Any process that stops, prevents, or reduces the frequency, rate or extent of protein kinase activity. |
| negative regulation of stress-activated MAPK cascade | Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the stress-activated MAPK cascade. |
| tRNA aminoacylation for protein translation | The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA and the alpha carboxylic acid group of an amino acid, to be used in ribosome-mediated polypeptide synthesis. |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAALDSLSLF | TSLGLSEQKA | RETLKNSALS | AQLREAATQA | QQTLGSTIDK | ATGILLYGLA |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SRLRDTRRLS | FLVSYIASKK | IHTEPQLSAA | LEYVRSHPLD | PIDTVDFERE | CGVGVIVTPE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| QIEEAVEAAI | NRHRPQLLVE | RYHFNMGLLM | GEARAVLKWA | DGKMIKNEVD | MQVLHLLGPK |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LEADLEKKFK | VAKARLEETD | RRTAKDVVEN | GETADQTLSL | MEQLRGEALK | FHKPGENYKT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| PGYVVTPHTM | NLLKQHLEIT | GGQVRTRFPP | EPNGILHIGH | AKAINFNFGY | AKANNGICFL |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RFDDTNPEKE | EAKFFTAICD | MVAWLGYTPY | KVTYASDYFD | QLYAWAVELI | RRGLAYVCHQ |
| 370 | 380 | 390 | 400 | 410 | 420 |
| RGEELKGHNT | LPSPWRDRPM | EESLLLFEAM | RKGKFSEGEA | TLRMKLVMED | GKMDPVAYRV |
| 430 | 440 | 450 | 460 | 470 | 480 |
| KYTPHHRTGD | KWCIYPTYDY | THCLCDSIEH | ITHSLCTKEF | QARRSSYFWL | CNALDVYCPV |
| 490 | 500 | 510 | 520 | 530 | 540 |
| QWEYGRLNLH | YAVVSKRKIL | QLVATGAVRD | WDDPRLFTLT | ALRRRGFPPE | AINNFCARVG |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VTVAQTTMEP | HLLEACVRDV | LNDTAPRAMA | VLESLRVIIT | NFPAAKSLDI | QVPNFPADET |
| 610 | 620 | 630 | 640 | 650 | 660 |
| KGFHQVPFAP | IVFIERTDFK | EEPEPGFKRL | AWGQPVGLRH | TGYVIELQHV | VKGPSGCVES |
| 670 | 680 | 690 | 700 | 710 | 720 |
| LEVTCRRADA | GEKPKAFIHW | VSQPLMCEVR | LYERLFQHKN | PEDPTEVPGG | FLSDLNLASL |
| 730 | 740 | 750 | 760 | 770 | |
| HVVDAALVDC | SVALAKPFDK | FQFERLGYFS | VDPDSHQGKL | VFNRTVTLKE | DPGKV |