P44967

PR
Gene name
smpB
Protein name
SsrA-binding protein
Names
Small protein B
Species
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
KEGG Pathway
hin:HI_0981
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-42 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for P44967

Entry ID Method Resolution Chain Position Source
AF-P44967-F1 Predicted AlphaFoldDB

No variants for P44967

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for P44967

No associated diseases with P44967

1 regional properties for P44967

Type Name Position InterPro Accession
conserved_site SsrA-binding protein, conserved site 31 - 43 IPR020081

Functions

Description
EC Number
Subcellular Localization
  • Cytoplasm
  • The tmRNA-SmpB complex associates with stalled 70S ribosomes
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytosol The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

1 GO annotations of molecular function

Name Definition
RNA binding Binding to an RNA molecule or a portion thereof.

2 GO annotations of biological process

Name Definition
trans-translation A translational elongation process in which transfer of a translating ribosome from one mRNA to another RNA template takes place. Trans-translation occurs during tmRNA release of stalled ribosomes.
trans-translation-dependent protein tagging A protein modification process in which a polypeptide is added to a nascent polypeptide cotranslationally by trans-translation.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MTKKKVKPNS NTIALNKRAR HDYFIEDEIE AGLELQGWEV KSMRAGKANI SDSYVIFKNG
70 80 90 100 110 120
EAFLFGASIQ PLNVASTHIV CDPTRTRKLL LNKRELASLF GKANRDGFTI VALSLYWKSA
130 140 150 160
WAKVKIGLAK GKKQQDKRDD IKEREWKVTK DRIMKNAHRR S