P27404

PR
Gene name
ORF2
Protein name
Capsid protein
Names
Coat protein, CP, VP1
Species
Feline calicivirus (strain CFI/68 FIV) (FCV)
KEGG Pathway
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

107-190 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

0 structures for P27404

Entry ID Method Resolution Chain Position Source

No variants for P27404

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for P27404

No associated diseases with P27404

2 regional properties for P27404

Type Name Position InterPro Accession
domain Calicivirus coat protein 112 - 395 IPR004005
domain Picornavirus/Calicivirus coat protein 164 - 328 IPR033703

Functions

Description
EC Number
Subcellular Localization
  • [Mature capsid protein]: Virion
  • Host cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
host cell cytoplasm The cytoplasm of a host cell.
T=3 icosahedral viral capsid The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=3 symmetry. The T=3 capsid is composed of 12 pentameric and 20 hexameric capsomeres.

No GO annotations of molecular function

Name Definition
No GO annotations for molecular function

No GO annotations of biological process

Name Definition
No GO annotations for biological process

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MCSTCANVLK YYDWDPHIKL VINPNKFLHV GFCDNPLMCC YPELLPEFGT MWDCDQSPLQ
70 80 90 100 110 120
VYLESILGDD EWSSTHEAID PVVPPMHWDE AGKIFQPHPG VLMHHLICKV AEGWDPNLPL
130 140 150 160 170 180
FRLEADDGSI TTPEQGTMVG GVIAEPNAQM STAADMATGK SVDSEWEAFF SFHTSVNWST
190 200 210 220 230 240
SETQGKILFK QSLGPLLNPY LTHLAKLYVA WSGSVDVRFS ISGSGVFGGK LAAIVVPPGI
250 260 270 280 290 300
DPVQSTSMLQ YPHVLFDARQ VEPVIFSIPD LRSTLYHLMS DTDTTSLVIM VYNDLINPYA
310 320 330 340 350 360
NDSNSSGCIV TVETKPGPDF KFHLLKPPGS MLTHGSIPSD LIPKSSSLWI GNRFWSDITD
370 380 390 400 410 420
FVIRPFVFQA NRHFDFNQET AGWSTPRFRP ITITISVKES AKLGIGVATD YIVPGIPDGW
430 440 450 460 470 480
PDTTIPGELV PVGDYAITNG TNNDITTAAQ YDAATEIRNN TNFRGMYICG SLQRAWGDKK
490 500 510 520 530 540
ISNTAFITTG TVDGAKLIPS NTIDQTKIAV FQDTHANKHV QTSDDTLALL GYTGIGEEAI
550 560 570 580 590 600
GADRDRVVRI SVLPERGARG GNHPIFHKNS IKLGYVIRSI DVFNSQILHT SRQLSLNHYL
610 620 630 640 650 660
LSPDSFAVYR IIDSNGSWFD IGIDNDGFSF VGVSSIGKLE FPLTASYMGI QLAKIRLASN
IRSVMTKL