P23747
Gene name |
algB (PA5483) |
Protein name |
Alginate biosynthesis transcriptional regulatory protein AlgB |
Names |
|
Species |
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) |
KEGG Pathway |
pae:PA5483 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P23747
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P23747-F1 | Predicted | AlphaFoldDB |
No variants for P23747
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for P23747 | |||||
No associated diseases with P23747
7 regional properties for P23747
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Signal transduction response regulator, receiver domain | 9 - 124 | IPR001789 |
| domain | RNA polymerase sigma factor 54 interaction domain | 147 - 376 | IPR002078 |
| domain | DNA binding HTH domain, Fis-type | 407 - 447 | IPR002197 |
| domain | AAA+ ATPase domain | 167 - 318 | IPR003593 |
| binding_site | Sigma-54 interaction domain, ATP-binding site 1 | 171 - 184 | IPR025662 |
| binding_site | Sigma-54 interaction domain, ATP-binding site 2 | 233 - 248 | IPR025943 |
| conserved_site | Sigma-54 interaction domain, conserved site | 360 - 369 | IPR025944 |
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| sequence-specific DNA binding | Binding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
7 GO annotations of biological process
| Name | Definition |
|---|---|
| alginic acid biosynthetic process | The chemical reactions and pathways resulting in the formation of alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds). |
| negative regulation of single-species biofilm formation on inanimate substrate | Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation on inanimate substrate. |
| phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. |
| positive regulation of cell motility | Any process that activates or increases the frequency, rate or extent of cell motility. |
| positive regulation of DNA-templated transcription | Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
| positive regulation of proteolysis | Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein. |
| positive regulation of secondary metabolite biosynthetic process | Any process that activates or increases the frequency, rate or extent of secondary metabolite biosynthetic process. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| METTSEKQGR | ILLVDDESAI | LRTFRYCLED | EGYSVATASS | APQAEALLQR | QVFDLCFLDL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RLGEDNGLDV | LAQMRVQAPW | MRVVIVTAHS | AVDTAVDAMQ | AGAVDYLVKP | CSPDQLRLAA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| AKQLEVRQLT | ARLEALEDEV | RRQGDGLESH | SPAMAAVLET | ARQVAATDAN | ILILGESGSG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KGELARAIHT | WSKRAKKPQV | TINCPSLTAE | LMESELFGHS | RGAFTGATES | TLGRVSQADG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| GTLFLDEIGD | FPLTLQPKLL | RFIQDKEYER | VGDPVTRRAD | VRILAATNRD | LGAMVAQGQF |
| 310 | 320 | 330 | 340 | 350 | 360 |
| REDLLYRLNV | IVLNLPPLRE | RAEDILGLAE | RFLARFVKDY | GRPARGFSEA | AREAMRQYPW |
| 370 | 380 | 390 | 400 | 410 | 420 |
| PGNVRELRNV | IERASIICNQ | ELVDVDHLGF | SAAQSASSAP | RIGESLSLED | LEKAHITAVM |
| 430 | 440 | ||||
| ASSATLDQAA | KTLGIDASTL | YRKRKQYGL |