P17869

PR
Gene name
sigH (spo0H, BSU00980)
Protein name
RNA polymerase sigma-H factor
Names
Sigma-30, Stage 0 sporulation protein H
Species
Bacillus subtilis (strain 168)
KEGG Pathway
bsu:BSU00980
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-49 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for P17869

Entry ID Method Resolution Chain Position Source
AF-P17869-F1 Predicted AlphaFoldDB

No variants for P17869

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for P17869

No associated diseases with P17869

10 regional properties for P17869

Type Name Position InterPro Accession
domain RNA polymerase sigma-70 305 - 318 IPR000943-1
domain RNA polymerase sigma-70 329 - 337 IPR000943-2
domain RNA polymerase sigma-70 453 - 465 IPR000943-3
domain RNA polymerase sigma-70 474 - 500 IPR000943-4
domain RNA polymerase sigma-70 region 3 360 - 436 IPR007624
domain RNA polymerase sigma-70 region 2 281 - 350 IPR007627
domain RNA polymerase sigma-70 region 4 449 - 502 IPR007630
domain RNA polymerase sigma-70 region 1.2 216 - 249 IPR009042
domain RNA polymerase sigma factor RpoD, C-terminal 277 - 513 IPR012760
domain RNA polymerase sigma-70 like domain 277 - 502 IPR014284

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

2 GO annotations of molecular function

Name Definition
DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
sigma factor activity Sigma factors act as the promoter specificity subunit of eubacterial and plant plastid multisubunit RNA polymerases, whose core subunit composition is often described as alpha(2)-beta-beta-prime. Although sigma does not bind DNA on its own, when combined with the core to form the holoenzyme, the sigma factor binds specifically to promoter elements. The sigma subunit is released once elongation begins.

4 GO annotations of biological process

Name Definition
DNA-templated transcription initiation The initial step of transcription, consisting of the assembly of the RNA polymerase preinitiation complex (PIC) at a gene promoter, as well as the formation of the first few bonds of the RNA transcript. Transcription initiation includes abortive initiation events, which occur when the first few nucleotides are repeatedly synthesized and then released, and ends when promoter clearance takes place.
regulation of DNA-templated transcription Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
response to stimulus Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism.
sporulation resulting in formation of a cellular spore The process in which a relatively unspecialized cell acquires the specialized features of a cellular spore, a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MNLQNNKGKF NKEQFCQLED EQVIEKVHVG DSDALDYLIT KYRNFVRAKA RSYFLIGADR
70 80 90 100 110 120
EDIVQEGMIG LYKSIRDFKE DKLTSFKAFA ELCITRQIIT AIKTATRQKH IPLNSYASLD
130 140 150 160 170 180
KPIFDEESDR TLLDVISGAK TLNPEEMIIN QEEFDDIEMK MGELLSDLER KVLVLYLDGR
190 200 210
SYQEISDELN RHVKSIDNAL QRVKRKLEKY LEIREISL