P16901

PR
Gene name
pol
Protein name
Pol polyprotein
Names
Species
Ovine maedi visna related virus (strain South Africa) (SA-OMVV) (Ovine lentivirus)
KEGG Pathway
EC number
2.7.7.49: Nucleotidyltransferases
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

92-170 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

0 structures for P16901

Entry ID Method Resolution Chain Position Source

No variants for P16901

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for P16901

No associated diseases with P16901

6 regional properties for P16901

Type Name Position InterPro Accession
domain Reverse transcriptase domain 186 - 363 IPR000477
domain Integrase, catalytic core 864 - 1023 IPR001584
domain Spumavirus aspartic protease A9 1 - 176 IPR001641
domain Ribonuclease H domain 590 - 748 IPR002156
domain Retroviral integrase, C-terminal SH3 domain 1063 - 1125 IPR040903
domain Integrase zinc-binding domain 799 - 854 IPR041588

Functions

Description
EC Number 2.7.7.49 Nucleotidyltransferases
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

7 GO annotations of molecular function

Name Definition
aspartic-type endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.
DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
dUTP diphosphatase activity Catalysis of the reaction: dUTP + H2O = dUMP + H+ + diphosphate.
exoribonuclease H activity Catalysis of the exonucleolytic cleavage of RNA to 5'-phosphomonoester oligonucleotides in both 5' to 3' and 3' to 5' directions.
RNA-directed DNA polymerase activity Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time.
RNA-DNA hybrid ribonuclease activity Catalysis of the endonucleolytic cleavage of RNA in RNA-DNA hybrids to 5'-phosphomonoesters.
zinc ion binding Binding to a zinc ion (Zn).

7 GO annotations of biological process

Name Definition
DNA integration The process in which a DNA segment is incorporated into another, usually larger, DNA molecule such as a chromosome.
DNA recombination Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
establishment of integrated proviral latency A process by which the virus integrates into the host genome and establishes as a stable provirus or prophage.
nucleotide metabolic process The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates).
proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
viral entry into host cell The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
viral genome integration into host DNA The insertion into a host genome of viral DNA, usually by the action of an integrase enzyme. Once integrated, the provirus persists in the host cell and serves as a template for the transcription of viral genes and replication of the viral genome, leading to the production of new viruses.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
SNITAGKQQE GATCGAVRAP YVVTEAPPKI DIKVGTNWKK VLVDTGADRT IVRYHDNSGI
70 80 90 100 110 120
PTGRIKLQGI GGIIEGEKWD KVVIQYKEKR IEGTIVVLPS SPVEVLGRDN MAKLDIGIIM
130 140 150 160 170 180
ANLEEKKIPI TQVKLKEGCK GPHIAQWPLT QEKLEGLKEI VDKLEKEGKV GRAPPHWTCN
190 200 210 220 230 240
TPIFCIKKKS GKWRMLIDFR ELNKQTEDLA EAQLGLPHPG GLQKKKHVTI LDIGDAYFTI
250 260 270 280 290 300
PLYEPYRPYT CFTMLSPNNL GPCTRYYWKV LPQGWKLSPS VYQFTMQEIL RDWIAKHPMI
310 320 330 340 350 360
QFGIYMDDIY IGSDLDIMKH REIVEELASY IAQYGFMLPE EKRQEGYPAK WLGFELHPEK
370 380 390 400 410 420
WRFQKHTLPE IKEGTITLNK LQKLVGDLVW RQSLIGKSIP NILKLMEGDR ALQSERRIEL
430 440 450 460 470 480
RHVKEWEECR RKLAEMEGNY YDEEKDVYGQ IDWGDKAIEY IVFQERGKPL WVNVVHNIKN
490 500 510 520 530 540
LSQSQQIIKA AQKLTQEVII RIGKIPWILL PGKEEDWILE LQIGNITWMP SFWSCYRGSI
550 560 570 580 590 600
RWKKRNVITE VVEGPTYYTD GGKKNGKGSL GFIASTGVKF RKHEEGTNQQ LELRAIEEAC
610 620 630 640 650 660
KQGPEKMNIV TDSRYAYEFM RRNWDEEVIK NPIQARIMKL VHDKEQIGVH WVPGHKGIPQ
670 680 690 700 710 720
NEEIDKYISE IFLAREGSGI LPKRAEDAGY DLICPQEVCI PAGQVRKIPI NLRINLKEDQ
730 740 750 760 770 780
WAMVGTKSSF ASKGVFVQGG IIDSGYQGII QVVVYNSNDK EVIIPQGRKF AQLILMPLIH
790 800 810 820 830 840
EDLEAWGETR RTERGNQGFG STGAYWIENI PLAEEDHSKW HQDAGSLHLD FGIPRTAAED
850 860 870 880 890 900
IVQQCEVCQE NKMPSTIRGS NRRGIDHWQV DYTHYEDKII LVWVETNSGL IYAERVKGET
910 920 930 940 950 960
GQEFRIMTIR WYGLFAPKSL QSDNGPAFVA EPTQLLMKYL GITHTTGIPW NPQSQALVER
970 980 990 1000 1010 1020
THQTLKNTIE KFVSMFASFD SAIAAALITL NIKRKGGLGT SPMDIFIFNK EQQRIQQQST
1030 1040 1050 1060 1070 1080
RNQSKFRFCY YRVRKRGHPG EWLGPTQVLW EGEGAIVIKD KNLEKYLVIA KKDVKFIPQP
KEIQTE