P13788

PR
Gene name
rps4
Protein name
30S ribosomal protein S4, chloroplastic
Names
Chloroplastic small ribosomal subunit protein uS4c
Species
Spinacia oleracea (Spinach)
KEGG Pathway
soe:2715646
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-69 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

7 structures for P13788

Entry ID Method Resolution Chain Position Source
4V61 EM 940 A AD 1-201 PDB
5MMJ EM 365 A d 1-201 PDB
5MMM EM 340 A d 1-201 PDB
5X8P EM 340 A d 1-201 PDB
5X8R EM 370 A d 1-201 PDB
6ERI EM 300 A BD 2-201 PDB
AF-P13788-F1 Predicted AlphaFoldDB

No variants for P13788

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for P13788

No associated diseases with P13788

3 regional properties for P13788

Type Name Position InterPro Accession
domain Ribosomal protein S4/S9, N-terminal 3 - 88 IPR001912
domain RNA-binding S4 domain 89 - 153 IPR002942
conserved_site Ribosomal protein S4, conserved site 87 - 111 IPR018079

Functions

Description
EC Number
Subcellular Localization
  • Plastid, chloroplast
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
small ribosomal subunit The smaller of the two subunits of a ribosome.

2 GO annotations of molecular function

Name Definition
rRNA binding Binding to a ribosomal RNA.
structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.

2 GO annotations of biological process

Name Definition
positive regulation of translational fidelity Any process that increases the ability of the translational apparatus to interpret the genetic code.
translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSRYRGPRFK KIRRLGALPG LTNKRPRAGS DLRNQSRSGK RSQYRIRLEE KQKLRFHYGI
70 80 90 100 110 120
TERQLLKYVR IARKAKGSTG QVLLQLLEMR LDNILFRLGM APTIPGARQL VNHRHILVNG
130 140 150 160 170 180
RIVDIPSYRC KPQDTIMARD EQKSIALIQN SLDLSPREEL PKHLTLNPFP YKGLVNQIID
190 200
SKWVGLKINE LLVVEYYSRQ T