P12540
Gene name |
IVa2 |
Protein name |
Packaging protein 1 |
Names |
Packaging protein IVa2 |
Species |
Human adenovirus A serotype 12 (HAdV-12) (Human adenovirus 12) |
KEGG Pathway |
vg:1460856 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
0 structures for P12540
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|
No variants for P12540
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for P12540 | |||||
No associated diseases with P12540
No regional properties for P12540
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for P12540 | |||
Functions
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| host cell nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic host cells. |
| host cell nucleoplasm | That part of a host cell's nuclear content other than the chromosomes or the nucleolus. The host is the larger of the organisms involved in a symbiotic interaction. |
| virion component | Any constituent part of a virion, a complete fully infectious extracellular virus particle. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
6 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA-templated transcription | The synthesis of an RNA transcript from a DNA template. |
| nuclear capsid assembly | The assembly of a virus capsid that occurs in the nucleus. The assembly of large icosahedral shells for herpesviridae and adenoviridae requires structural proteins that act as chaperones for assembly. |
| regulation of DNA-templated transcription | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
| viral DNA genome packaging via site-specific sequence recognition | The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites by a viral terminase. |
| viral release from host cell | The dissemination of mature viral particles from the host cell, e.g. by cell lysis or the budding of virus particles from the cell membrane. |
| viral transcription | The process by which a viral genome, or part of a viral genome, is transcribed within the host cell. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MLPCRSTGRR | HALQHQPPQF | KAHTGQRSTR | SASIHRDRNN | PDAHITSLEG | QNPRPFGCSP |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PRSLQQQPAK | PPQRGSLLDR | DGIENITELW | DRLQLLKQTL | DHMPMADGLK | PLKNFKSLQE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| LLSLGGERLL | GELAKQNIRV | RQMMNEVAPL | LHEDGSCTSL | NYHLQPVIGV | IYGPTGCGKS |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QLLRNLLSAQ | LVTPAPETVF | FIVPQVDMIP | PSEIKSWEMQ | ICEGNYVPGP | EGTIIPQSGT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LCPKFVKLSY | DDLTLDHNYD | VSDPENIFAQ | AAARGPIAII | MDECMENLGS | HKGVSKFFHA |
| 310 | 320 | 330 | 340 | 350 | 360 |
| FPSKLHDKFP | KCTGYTVFVV | LHNMNPRRDL | AGNIANLKIQ | SKLHIMSPRM | HPTQLNRFIN |
| 370 | 380 | 390 | 400 | 410 | 420 |
| TYTKGLPLAI | SLLLKDIFNH | HAQRCCYDWI | IYNTNPEHEA | LQWSYLHPKD | GLMPMYLNIQ |
| 430 | 440 | 450 | |||
| AHLYKILEHI | HRVLNDRERW | SRAYHVRKNK | YQ |