P11226
Gene name |
MBL2 |
Protein name |
Mannose-binding protein C |
Names |
MBP-C, Collectin-1, MBP1, Mannan-binding protein, Mannose-binding lectin |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:4153 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for P11226
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 1HUP | X-ray | 250 A | A | 108-248 | PDB |
| AF-P11226-F1 | Predicted | AlphaFoldDB |
225 variants for P11226
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV001105837 rs1049360705 CA207457379 |
9 | L>P | Mannose-binding lectin deficiency [ClinVar] | Yes |
ClinGen ClinVar dbSNP gnomAD |
|
CA207457372 COSM1505291 rs201511397 RCV001105835 |
37 | A>S | lung Variant assessed as Somatic; 0.0 impact. Mannose-binding lectin deficiency [Cosmic, NCI-TCGA, ClinVar] | Yes |
ClinGen cosmic curated ClinVar NCI-TCGA TOPMed dbSNP gnomAD |
|
RCV001104674 CA5504428 rs1342494768 |
45 | G>S | Mannose-binding lectin deficiency [ClinVar] | Yes |
ClinGen ClinVar TOPMed dbSNP |
|
RCV000015426 RCV000991134 VAR_008543 rs5030737 CA123885 RCV002274881 |
52 | R>C | Cystic fibrosis Mannose-binding lectin deficiency 0.05% of European and African populations [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs1800450 RCV000015424 RCV002274880 RCV001777138 CA123877 VAR_004182 |
54 | G>D | Mannose-binding lectin deficiency associated with low serum mannose-binding protein (MBP) concentrations and recurrent infections [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV000374843 rs886047053 CA10635923 |
55 | T>A | Variant assessed as Somatic; 0.0 impact. Mannose-binding lectin deficiency [NCI-TCGA, ClinVar] | Yes |
ClinGen ClinVar NCI-TCGA dbSNP gnomAD |
|
RCV000320152 rs886047052 CA10628696 |
56 | K>E | Mannose-binding lectin deficiency [ClinVar] | Yes |
ClinGen ClinVar Ensembl dbSNP |
|
VAR_004183 RCV000015425 RCV001642227 rs1800451 CA123881 RCV000455297 |
57 | G>E | Mannose-binding lectin deficiency associated with low serum mannose-binding protein (MBP) concentrations; associated with protection against tuberculosis caused by Mycobacterium africanum [ClinVar, UniProt] | Yes |
ClinGen ClinVar UniProt 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
CA5504378 RCV000373660 rs143562102 COSM918878 |
101 | P>L | Variant assessed as Somatic; 0.0 impact. endometrium Mannose-binding lectin deficiency [NCI-TCGA, Cosmic, ClinVar] | Yes |
ClinGen cosmic curated ClinVar 1000Genomes ESP ExAC NCI-TCGA TOPMed dbSNP gnomAD |
|
CA5504310 rs149216902 RCV001332301 |
150 | K>T | Mannose-binding lectin deficiency [ClinVar] | Yes |
ClinGen ClinVar ESP ExAC TOPMed dbSNP gnomAD |
|
rs200749792 CA5504302 RCV001102751 |
164 | T>P | Mannose-binding lectin deficiency [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs8191996 RCV000912398 CA5504298 RCV001102750 |
176 | N>S | Mannose-binding lectin deficiency [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ExAC TOPMed dbSNP gnomAD |
|
rs756763361 RCV001102748 |
194 | Q>K | Mannose-binding lectin deficiency [ClinVar] | Yes |
ClinVar dbSNP |
|
rs74754826 RCV000883897 RCV000778285 CA5504280 |
210 | E>* | Mannose-binding lectin deficiency [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
RCV002556113 rs780449116 RCV001107984 CA5504275 |
219 | D>V | Inborn genetic diseases Mannose-binding lectin deficiency [ClinVar] | Yes |
ClinGen ClinVar ExAC TOPMed dbSNP gnomAD |
|
CA5504258 rs776003487 RCV001107983 |
245 | E>K | Mannose-binding lectin deficiency [ClinVar] | Yes |
ClinGen ClinVar ExAC dbSNP gnomAD |
| TCGA novel | 5 | P>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376540313 rs1218451038 |
5 | P>T | No |
ClinGen gnomAD |
|
| TCGA novel | 8 | P>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1482691555 CA376540291 |
8 | P>L | No |
ClinGen gnomAD |
|
|
rs1482691555 CA376540293 |
8 | P>R | No |
ClinGen gnomAD |
|
|
rs150611863 CA5504451 |
8 | P>S | No |
ClinGen ESP ExAC TOPMed |
|
|
rs1251837938 CA376540288 |
9 | L>F | No |
ClinGen gnomAD |
|
|
rs1209288010 CA376540283 |
10 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA5504450 rs755800221 |
10 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA207457378 rs72661127 |
12 | L>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5504447 rs72661127 |
12 | L>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs72661126 CA5504448 |
12 | L>V | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA376540255 rs1286850203 |
15 | V>M | No |
ClinGen gnomAD |
|
|
CA376540243 rs1314281821 |
17 | A>T | No |
ClinGen gnomAD |
|
|
CA5504445 rs76063875 COSM1581216 |
17 | A>V | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
rs762672772 CA5504443 |
22 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| VAR_013294 | 24 | T>A | Chinese [UniProt] | No | UniProt |
|
rs1407328481 CA376540192 |
25 | C>R | No |
ClinGen gnomAD |
|
|
rs72661128 CA207457376 |
25 | C>S | No |
ClinGen Ensembl |
|
|
rs1415613339 CA376540173 |
27 | D>V | No |
ClinGen gnomAD |
|
|
rs1413946607 CA376540170 |
28 | A>T | No |
ClinGen TOPMed |
|
|
rs372226530 CA207457375 |
28 | A>V | No |
ClinGen ESP TOPMed |
|
|
rs1156702796 CA376540160 |
29 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 30 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs199957742 CA207457374 |
32 | C>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA5504440 rs761026187 |
32 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs1184308972 CA376540132 |
33 | P>L | No |
ClinGen gnomAD |
|
|
rs775403277 CA5504439 |
34 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1245655310 CA376540127 |
34 | A>V | No |
ClinGen gnomAD |
|
|
CA5504438 rs772241095 |
35 | V>M | No |
ClinGen ExAC gnomAD |
|
|
rs759555588 CA5504437 |
36 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774957752 CA5504436 |
38 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA5504434 rs146004726 |
39 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA376540100 rs146004726 |
39 | S>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs148483303 CA5504432 |
40 | S>A | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1438807395 CA376540093 |
40 | S>F | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA5504431 rs551889676 |
41 | P>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs534766467 CA207457370 |
44 | N>S | No |
ClinGen 1000Genomes |
|
|
CA5504427 rs754474544 |
46 | F>L | No |
ClinGen ExAC gnomAD |
|
|
rs959547616 CA207457369 |
51 | G>R | No |
ClinGen TOPMed |
|
|
CA5504424 rs148078249 |
52 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 54 | G>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376540000 rs1200785088 |
55 | T>I | No |
ClinGen TOPMed |
|
|
rs752913198 CA5504422 |
57 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA5504421 rs774585786 |
61 | E>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5504420 rs774585786 COSM232765 |
61 | E>K | skin [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA207457368 rs867703204 |
62 | P>L | No |
ClinGen TOPMed |
|
|
rs1589872076 CA376539953 |
63 | G>R | No |
ClinGen Ensembl |
|
|
CA5504402 rs374041970 |
63 | G>V | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 64 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 64 | Q>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5504399 rs201305883 |
65 | G>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5504400 rs201305883 |
65 | G>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 66 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 68 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1210046973 CA376539898 |
70 | Q>* | No |
ClinGen TOPMed |
|
| TCGA novel | 70 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA207457296 rs773731975 |
71 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs925810142 CA207457297 |
71 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs925810142 CA376539891 |
71 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs773731975 CA5504398 |
71 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs370571813 CA5504396 |
72 | P>A | No |
ClinGen ESP ExAC gnomAD |
|
|
rs762180558 CA5504395 |
72 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA376539884 rs1429904377 |
73 | P>A | No |
ClinGen gnomAD |
|
| rs747467008 | 73 | P>L | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs776919128 CA5504392 |
74 | G>* | No |
ClinGen ExAC gnomAD |
|
|
rs1163872969 CA376539867 |
75 | K>N | No |
ClinGen TOPMed |
|
|
rs768298037 CA376539866 |
76 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA376539865 rs1423577299 |
76 | L>S | No |
ClinGen gnomAD |
|
|
rs768298037 CA5504391 |
76 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA376539860 rs1415008241 |
77 | G>R | No |
ClinGen gnomAD |
|
|
rs774962182 CA207457294 |
78 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774962182 CA5504389 |
78 | P>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5504387 rs745411895 |
79 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs771524640 CA5504388 |
79 | P>S | No |
ClinGen ExAC gnomAD |
|
|
CA376539843 rs1484098696 |
80 | G>E | No |
ClinGen gnomAD |
|
|
CA376539839 rs1263879100 |
81 | N>D | No |
ClinGen gnomAD |
|
| TCGA novel | 82 | P>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1244356396 CA376539830 |
82 | P>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs749092603 CA5504384 |
84 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs777495382 CA5504382 |
85 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs1307417331 CA376539807 |
86 | G>E | No |
ClinGen gnomAD |
|
|
CA376539801 rs1398071537 |
87 | S>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs751877822 CA5504380 |
89 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs1350772334 CA376539787 |
90 | P>S | No |
ClinGen gnomAD |
|
|
rs865796533 CA207457291 |
94 | K>Q | No |
ClinGen Ensembl |
|
|
rs368461120 CA207457290 |
95 | G>A | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA5504379 rs766727655 |
96 | D>E | No |
ClinGen ExAC gnomAD |
|
|
rs1411830147 CA376539747 |
96 | D>N | No |
ClinGen gnomAD |
|
|
rs1449337298 CA376539731 |
98 | G>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
rs1420901630 CA376539734 |
98 | G>R | No |
ClinGen gnomAD |
|
| TCGA novel | 100 | S>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 100 | S>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| rs55902142 | 101 | P>= | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376539708 rs143562102 |
101 | P>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1384336857 CA376539694 |
102 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs765762469 CA5504376 |
102 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1020868107 CA207457137 |
104 | D>G | No |
ClinGen TOPMed |
|
|
rs1020868107 CA376539680 |
104 | D>V | No |
ClinGen TOPMed |
|
|
rs137974936 CA207457136 |
105 | S>N | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs137974936 CA5504347 |
105 | S>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs202135976 CA207457135 |
106 | S>I | No |
ClinGen 1000Genomes |
|
|
rs1466598015 CA376539666 |
106 | S>R | No |
ClinGen gnomAD |
|
| TCGA novel | 110 | S>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1166904742 CA376539633 |
112 | R>G | No |
ClinGen TOPMed gnomAD |
|
|
rs1032113091 CA207457134 |
112 | R>I | No |
ClinGen TOPMed gnomAD |
|
|
CA376539629 rs1248941272 |
112 | R>S | No |
ClinGen gnomAD |
|
|
rs1448561201 CA376539614 |
114 | A>V | No |
ClinGen gnomAD |
|
|
rs181047707 CA5504344 |
119 | M>T | No |
ClinGen 1000Genomes ExAC |
|
|
rs140526147 CA5504342 |
120 | A>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
COSM1348196 rs769868112 CA5504343 |
120 | A>T | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
COSM918877 rs188107846 CA5504341 |
121 | R>C | endometrium [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
CA5504340 rs200416222 |
121 | R>H | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs200416222 CA376539571 |
121 | R>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA376539569 rs1271318863 |
122 | I>V | No |
ClinGen TOPMed |
|
|
CA5504337 rs779222681 |
125 | W>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376539546 rs779222681 |
125 | W>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA207457038 rs1025305086 |
126 | L>F | No |
ClinGen Ensembl |
|
|
CA376539503 rs1475452944 |
129 | S>F | No |
ClinGen TOPMed gnomAD |
|
|
CA376539494 rs749354310 |
131 | G>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5504317 rs749354310 |
131 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5504316 rs201337696 |
133 | Q>E | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5504315 rs200040065 |
134 | V>I | No |
ClinGen 1000Genomes ExAC |
|
|
CA376539460 rs35805975 |
136 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA207457037 rs1016829364 |
139 | F>C | No |
ClinGen Ensembl |
|
|
CA5504312 rs755256959 |
141 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376539427 rs755256959 |
141 | T>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs751956734 CA5504311 |
142 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
TCGA novel CA376539375 rs1234990008 |
148 | F>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
NCI-TCGA ClinGen TOPMed |
|
rs1254058022 COSM3709925 CA376539370 |
149 | E>A | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA207457034 rs8191995 |
151 | V>G | No |
ClinGen Ensembl |
|
|
rs749923192 CA5504308 |
151 | V>M | No |
ClinGen ExAC |
|
|
CA207457033 rs923026549 |
152 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
CA5504307 rs764889836 |
153 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs764889836 CA376539348 |
153 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA5504306 rs761434679 |
153 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5504305 rs776674540 |
154 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1290442390 CA376539331 |
155 | C>W | No |
ClinGen gnomAD |
|
|
CA376539329 rs1469282947 |
156 | V>I | No |
ClinGen TOPMed |
|
|
rs1196009869 CA376539323 |
157 | K>E | No |
ClinGen TOPMed |
|
|
CA376539320 rs1251711278 |
157 | K>R | No |
ClinGen TOPMed |
|
|
CA376539306 rs1326879572 |
159 | Q>K | No |
ClinGen gnomAD |
|
| TCGA novel | 159 | Q>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1461753004 CA376539298 |
160 | A>S | No |
ClinGen gnomAD |
|
|
CA207457031 rs773268692 |
160 | A>V | No |
ClinGen Ensembl |
|
| TCGA novel | 164 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs144193243 CA5504300 |
170 | E>G | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1441045000 CA376539228 |
171 | N>S | No |
ClinGen TOPMed |
|
|
CA5504299 rs773253821 |
173 | A>D | No |
ClinGen ExAC gnomAD |
|
|
rs773253821 CA207457029 |
173 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs267602523 CA207457026 |
177 | L>F | No |
ClinGen Ensembl |
|
| TCGA novel | 177 | L>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755567866 CA5504295 |
182 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs781484489 CA5504296 |
182 | A>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs139637221 CA5504294 |
183 | F>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA376539140 rs1266627349 |
185 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
CA376539132 rs1318031019 COSM1581213 |
186 | I>L | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1318031019 CA376539133 |
186 | I>V | No |
ClinGen gnomAD |
|
|
CA376539124 COSM403623 rs1341715246 |
187 | T>N | lung [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs758101969 CA5504292 |
188 | D>A | No |
ClinGen ExAC gnomAD |
|
|
CA376539099 rs1257704240 |
190 | K>N | No |
ClinGen TOPMed |
|
|
rs1213074662 CA376539103 |
190 | K>T | No |
ClinGen TOPMed |
|
|
CA5504290 rs368165740 |
192 | E>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756763361 CA5504289 |
194 | Q>* | No |
ClinGen ExAC |
|
|
rs753414577 CA5504288 |
195 | F>L | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 202 | R>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs760730624 CA5504286 |
202 | R>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs375051927 CA207457024 |
202 | R>T | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1429840709 CA376538999 |
206 | T>R | No |
ClinGen gnomAD |
|
|
CA5504284 rs775112414 |
207 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA5504283 rs767391194 |
208 | W>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1423894412 CA376538980 |
209 | N>D | No |
ClinGen gnomAD |
|
|
rs370867162 CA207457023 |
209 | N>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs74754826 CA5504281 |
210 | E>K | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1245872723 CA376538962 COSM1719468 |
212 | E>K | NS [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
CA376538950 rs1188319564 |
213 | P>H | No |
ClinGen gnomAD |
|
|
CA376538948 rs12260094 |
214 | N>H | No |
ClinGen TOPMed |
|
|
rs761822692 CA5504279 |
214 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs12260094 VAR_050119 CA207457022 |
214 | N>Y | No |
ClinGen UniProt TOPMed dbSNP |
|
|
CA5504278 rs368692351 |
215 | N>D | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1404749251 CA376538939 |
215 | N>S | No |
ClinGen TOPMed |
|
|
CA5504277 rs769015081 |
216 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs747599901 CA5504276 |
218 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs1236701333 CA376538913 |
219 | D>E | No |
ClinGen gnomAD |
|
|
rs772528379 CA5504274 |
220 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs746243862 CA5504273 |
221 | D>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376538884 rs757031277 |
224 | L>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA376538845 rs1235210305 |
230 | Q>* | No |
ClinGen TOPMed |
|
|
rs868752483 CA207457021 |
231 | W>* | No |
ClinGen Ensembl |
|
| TCGA novel | 231 | W>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs777379872 CA5504269 |
231 | W>R | No |
ClinGen ExAC gnomAD |
|
|
rs1312939456 CA376538811 |
234 | V>D | No |
ClinGen gnomAD |
|
|
rs748028913 CA207457020 COSM1214650 |
234 | V>I | large_intestine [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs1356236767 CA376538809 |
235 | P>T | No |
ClinGen TOPMed |
|
|
CA5504266 rs767473969 |
236 | C>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5504267 rs767473969 COSM465736 |
236 | C>Y | kidney Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA376538787 rs1422137172 |
238 | T>I | No |
ClinGen gnomAD |
|
|
CA5504265 rs755866544 |
238 | T>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA376538784 rs1328706935 |
239 | S>A | No |
ClinGen TOPMed gnomAD |
|
|
CA5504264 rs751367424 |
239 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs1328706935 CA376538785 |
239 | S>P | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 240 | H>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA376538768 rs776551094 |
242 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA5504261 COSM1321308 rs776551094 |
242 | A>T | ovary Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA5504259 rs185230071 |
243 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs998457048 CA207457016 |
244 | C>F | No |
ClinGen gnomAD |
|
|
CA207457017 rs370749963 |
244 | C>R | No |
ClinGen Ensembl |
|
|
CA5504257 rs376149426 |
246 | F>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs956133535 CA207457015 |
247 | P>A | No |
ClinGen Ensembl |
No associated diseases with P11226
7 GO annotations of cellular component
| Name | Definition |
|---|---|
| cell surface | The external part of the cell wall and/or plasma membrane. |
| collagen trimer | A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. |
| collagen-containing extracellular matrix | An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells. |
| external side of plasma membrane | The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface. |
| extracellular region | The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. |
| extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
| serine-type endopeptidase complex | A protein complex which is capable of serine-type endopeptidase activity. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| calcium-dependent protein binding | Binding to a protein or protein complex in the presence of calcium. |
| identical protein binding | Binding to an identical protein or proteins. |
| mannose binding | Binding to mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans. |
| signaling receptor binding | Binding to one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function. |
14 GO annotations of biological process
| Name | Definition |
|---|---|
| acute-phase response | An acute inflammatory response that involves non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals. |
| antiviral innate immune response | A defense response against viruses mediated through an innate immune response. An innate immune response is mediated by germline encoded components that directly recognize components of potential pathogens. |
| cell surface pattern recognition receptor signaling pathway | The series of molecular signals initiated by a ligand binding to a cell surface pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species. |
| complement activation, classical pathway | Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes. |
| complement activation, lectin pathway | Any process involved in the activation of any of the steps of the lectin pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes. |
| defense response to bacterium | Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism. |
| defense response to Gram-positive bacterium | Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism. |
| innate immune response | Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. |
| killing by host of symbiont cells | Any process mediated by an organism that results in the death of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction. |
| negative regulation of viral process | Any process that stops, prevents, or reduces the frequency, rate or extent of a multi-organism process in which a virus is a participant. |
| opsonization | The process in which a microorganism (or other particulate material) is rendered more susceptible to phagocytosis by coating with an opsonin, a blood serum protein such as a complement component or antibody. |
| positive regulation of opsonization | Any process that activates or increases the frequency, rate or extent of opsonization. |
| proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
| response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| P25031 | Reg3b | Regenerating islet-derived protein 3-beta | Rattus norvegicus (Rat) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MSLFPSLPLL | LLSMVAASYS | ETVTCEDAQK | TCPAVIACSS | PGINGFPGKD | GRDGTKGEKG |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EPGQGLRGLQ | GPPGKLGPPG | NPGPSGSPGP | KGQKGDPGKS | PDGDSSLAAS | ERKALQTEMA |
| 130 | 140 | 150 | 160 | 170 | 180 |
| RIKKWLTFSL | GKQVGNKFFL | TNGEIMTFEK | VKALCVKFQA | SVATPRNAAE | NGAIQNLIKE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| EAFLGITDEK | TEGQFVDLTG | NRLTYTNWNE | GEPNNAGSDE | DCVLLLKNGQ | WNDVPCSTSH |
| LAVCEFPI |