P11211

PR
Gene name
N
Protein name
Nucleoprotein
Names
NP, Nucleocapsid protein, Protein N
Species
Chandipura virus (strain I653514) (CHPV)
KEGG Pathway
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

323-397 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

0 structures for P11211

Entry ID Method Resolution Chain Position Source

4 variants for P11211

Variant ID(s) Position Change Description Diseaes Association Provenance
37 K>R strain: Isolate CIN0309R, Isolate CIN0318R, Isolate CIN0327R, Isolate CIN0327M, Isolate CIN0331M, Isolate CIN0360R and Isolate CIN0360V [UniProt] No
163 A>T strain: Isolate CIN0309R [UniProt] No
364 E>D strain: Isolate CIN0309R, Isolate CIN0318R, Isolate CIN0327R and Isolate CIN0327M, Isolate CIN0360R and Isolate CIN0360V [UniProt] No
413 V>I strain: Isolate CIN0360R and Isolate CIN0360V [UniProt] No

No associated diseases with P11211

1 regional properties for P11211

Type Name Position InterPro Accession
domain Rhabdovirus nucleocapsid 12 - 404 IPR000448

Functions

Description
EC Number
Subcellular Localization
  • Virion
  • Host cytoplasm
  • The nucleocapsid is synthesized in the cytoplasm, and is subsequently transported via microtubules to the cell periphery
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

4 GO annotations of cellular component

Name Definition
helical viral capsid The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form a protein helix with the genetic material contained within. Tobacco mosaic virus has such a capsid structure.
host cell cytoplasm The cytoplasm of a host cell.
ribonucleoprotein complex A macromolecular complex that contains both RNA and protein molecules.
viral nucleocapsid The complete protein-nucleic acid complex that is the packaged form of the genome in a virus particle.

1 GO annotations of molecular function

Name Definition
RNA binding Binding to an RNA molecule or a portion thereof.

No GO annotations of biological process

Name Definition
No GO annotations for biological process

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSSQVFCIST GQTVSVCLPA NEDPVEFPGA FFTPNAKKPT VYIKKETDLS LLRSHVYDGI
70 80 90 100 110 120
KDGSVTVSQI NSYLYMVLKD IREKPDKNWT SFGVELGKKN EPMGIFDLLN VEDVKGKELD
130 140 150 160 170 180
KKGQDTRLPG DDLWLPTLIF GLYRVSRATQ VEYKKTLMTN LYAQCKLRTK DAEEIVDETA
190 200 210 220 230 240
EFFNAWANDS NFTKIVAAVD MYFHHFKKSD HAPIRFGTIV SRFKDCAALS TLSHLQKVTG
250 260 270 280 290 300
LPIEEVFTWV FNKSVQDDLL RMMTPGQEID QADSYMPYLI DMGLSTKSPY SSTKNPSFHF
310 320 330 340 350 360
WGQLTAFLVK SARAKNALVP VDIAYHELTT AALLFAYAIG RSSELEQRFV LNGKKFTKEK
370 380 390 400 410 420
DSREDNDTTP PSERNVVVWL AWWEDIKHEI TPDMKAFAKR AVERVGDIRV NSVAEYARKL
FA