P09432
Gene name |
ntrC (nifR1, RCAP_rcc01798) |
Protein name |
DNA-binding transcriptional regulator NtrC |
Names |
Nitrogen regulation protein NR(I), Nitrogen regulator I, NRI |
Species |
Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) |
KEGG Pathway |
rcp:RCAP_rcc01798 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for P09432
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-P09432-F1 | Predicted | AlphaFoldDB |
No variants for P09432
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for P09432 | |||||
No associated diseases with P09432
6 regional properties for P09432
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Signal transduction response regulator, receiver domain | 3 - 118 | IPR001789 |
| domain | RNA polymerase sigma factor 54 interaction domain | 143 - 343 | IPR002078 |
| domain | DNA binding HTH domain, Fis-type | 407 - 450 | IPR002197 |
| domain | AAA+ ATPase domain | 163 - 278 | IPR003593 |
| binding_site | Sigma-54 interaction domain, ATP-binding site 1 | 167 - 180 | IPR025662 |
| conserved_site | Sigma-54 interaction domain, conserved site | 327 - 336 | IPR025944 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| sequence-specific DNA binding | Binding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| nitrogen fixation | The process in which nitrogen is taken from its relatively inert molecular form (N2) in the atmosphere and converted into nitrogen compounds useful for other chemical processes, such as ammonia, nitrate and nitrogen dioxide. |
| phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. |
| regulation of DNA-templated transcription | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDGTVLVADD | DRTIRTVLTQ | ALTRAGCKVH | ATASLMTLMR | WVEEGKGDLV | ISDVVMPDGN |
| 70 | 80 | 90 | 100 | 110 | 120 |
| GLEALPRIAR | ERPGLPVIVI | SAQNTIMTAI | QAAEADAYDY | LPKPFDLPDL | MKRAARALEL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KRRAQVVPKV | IETSRPEGTD | LPLVGRTAAM | QALYRLVARV | MNADLPVMIM | GESGTGKSLI |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AKAIHDFSDR | RTLPFVVAQA | ADLLGADGPS | SLLARVKGGS | LVFDEVGDYD | DETQGRIVRM |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LDALPDPAPR | IMATTQVDLG | ALMEAGRFRQ | DLYYRLGGVT | LAVPALRERV | EDIPLLAEHF |
| 310 | 320 | 330 | 340 | 350 | 360 |
| LGRAERDGLG | MRRFSAEAMG | LVRAYAWPGN | VRQLENTVRR | LVVTASEEEI | TRTEVEFVLG |
| 370 | 380 | 390 | 400 | 410 | 420 |
| NQPAVDALRG | AGGEGEKLSA | SIARHLRRYF | DLHGGNLPPP | GLYDRILAEM | EAPLIEIALD |
| 430 | 440 | 450 | |||
| ATGGNQAKCA | DLLGINRNTL | RKKITDLDIQ | VTRRRKLM |