P05399
Gene name |
ORF (IV) |
Protein name |
Probable capsid protein |
Names |
CP, Coat protein |
Species |
Carnation etched ring virus (CERV) |
KEGG Pathway |
vg:935427 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
0 structures for P05399
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|
No variants for P05399
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for P05399 | |||||
No associated diseases with P05399
1 regional properties for P05399
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Zinc finger, CCHC-type | 419 - 435 | IPR001878 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| host cell nucleus | A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction. |
| T=7 icosahedral viral capsid | The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=7 symmetry. The T=7 capsid is composed of 12 pentameric and 60 hexameric capsomeres. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| nucleic acid binding | Binding to a nucleic acid. |
| structural molecule activity | The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell. |
| zinc ion binding | Binding to a zinc ion (Zn). |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| viral entry into host cell | The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm. |
| viral penetration into host nucleus | The crossing by the virus of the host nuclear membrane, either as naked viral genome or for small viruses as an intact capsid. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MNREAILWKN | INSIPEEPDL | IKSLEVLSME | QNDRERELEH | NLILNKQISE | QIPEWIIPDS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| LSELSSGIDL | NFVLEEQEVN | DNNSQPSLEE | EVVSESDVES | MRSFNVAMNR | GEVGESSNKR |
| 130 | 140 | 150 | 160 | 170 | 180 |
| PKREPDLFTS | FGKIREDIGD | KNPSLNILNL | DCVNSPSDRK | NKIDKWAAEL | GLVFLTNPEA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| YTTAPNAARA | RLAYMEHKSL | GIVNRFIKST | QWTQMNGDIL | LNVVSGLYTM | FLGEDYTGNQ |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EKTLEQERAK | ASLRLINLQL | CDICSLQSFF | CDYESNLYKL | PQNEYPSLVK | QYLAKIPIVG |
| 310 | 320 | 330 | 340 | 350 | 360 |
| EKASKRFEEE | ASAATSYSLG | FAHKLVNEEL | AKICELSKKQ | KKLKRFNKNC | CSTFEKPYEY |
| 370 | 380 | 390 | 400 | 410 | 420 |
| GCKPSYSKKK | KYSKKYKPKY | TKYKVIRKKK | KFSPGKYFKP | KDKKSEKAKY | CPKGKKTCRC |
| 430 | 440 | 450 | 460 | 470 | 480 |
| WVCNIEGHYA | NECPNRQTSE | KFKLIQIAEN | YGLEPIENPY | EDQQEICLLE | QIQLSSSDSE |
| 490 | |||||
| LDDTCEESSS | EESE |