O95347
Gene name |
SMC2 (CAPE, SMC2L1, PRO0324) |
Protein name |
Structural maintenance of chromosomes protein 2 |
Names |
SMC protein 2, SMC-2, Chromosome-associated protein E, hCAP-E, XCAP-E homolog |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:10592 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
2 structures for O95347
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| 4U4P | X-ray | 189 A | A | 476-707 | PDB |
| AF-O95347-F1 | Predicted | AlphaFoldDB |
841 variants for O95347
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
RCV001291258 rs1834436764 |
921 | K>N | Wiedemann-Rautenstrauch-like progeroid syndrome [ClinVar] | Yes |
ClinVar dbSNP |
|
rs1482257659 CA374273623 |
3 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1484351079 CA374273645 |
4 | K>R | No |
ClinGen gnomAD |
|
|
CA197296825 rs943691076 |
5 | S>L | No |
ClinGen TOPMed |
|
|
CA5163985 rs772505501 |
6 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs780437577 CA5163986 |
7 | I>L | No |
ClinGen ExAC gnomAD |
|
|
rs768247237 CA5163989 |
8 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs761246411 CA5163990 |
9 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA197296865 rs375159580 |
10 | G>E | No |
ClinGen ESP TOPMed |
|
|
rs769337879 CA5163991 |
13 | S>F | No |
ClinGen ExAC gnomAD |
|
|
CA374273782 rs1587876282 |
13 | S>P | No |
ClinGen Ensembl |
|
|
CA374273813 rs1388069477 |
15 | A>G | No |
ClinGen gnomAD |
|
|
CA5163992 rs772652461 |
15 | A>S | No |
ClinGen ExAC |
|
|
CA374273842 rs1349170852 |
17 | R>K | No |
ClinGen gnomAD |
|
|
rs762922993 CA5163994 |
21 | N>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5163995 rs766265764 |
21 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA5163996 rs751352637 |
24 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs1329300975 CA374273963 |
25 | P>L | No |
ClinGen TOPMed |
|
|
rs1215455879 CA374273961 |
25 | P>S | No |
ClinGen gnomAD |
|
|
CA374274013 rs1467090794 |
28 | N>S | No |
ClinGen TOPMed |
|
|
rs995331900 CA197296915 |
30 | I>V | No |
ClinGen TOPMed |
|
|
CA5163998 rs148002848 |
31 | T>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5163999 rs148002848 |
31 | T>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374274240 rs1451109943 |
40 | N>K | No |
ClinGen gnomAD |
|
|
CA5164005 rs747315426 |
44 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs769012155 CA5164006 |
45 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs781602877 CA5164007 |
47 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1054329 CA197297010 |
48 | L>F | No |
ClinGen Ensembl |
|
|
CA374274433 rs1318789046 |
51 | I>L | No |
ClinGen gnomAD |
|
| TCGA novel | 52 | S>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1367549584 CA374274453 |
52 | S>F | No |
ClinGen gnomAD |
|
|
CA5164008 rs199888056 |
53 | N>K | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1175018117 CA374274461 |
53 | N>S | No |
ClinGen gnomAD |
|
|
rs181793444 CA5164009 |
55 | S>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1278480404 CA374274493 |
56 | Q>E | No |
ClinGen TOPMed |
|
|
CA5164027 rs748548699 |
58 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs979418822 CA197297647 |
58 | R>W | No |
ClinGen Ensembl |
|
|
CA374274673 rs1472221980 |
59 | A>P | No |
ClinGen gnomAD |
|
|
rs1180158523 CA374274685 |
59 | A>V | No |
ClinGen gnomAD |
|
|
CA374274746 rs1365585818 |
62 | L>F | No |
ClinGen gnomAD |
|
|
CA374274813 rs1379878036 |
65 | L>S | No |
ClinGen TOPMed |
|
|
rs1235078705 CA374274817 |
66 | V>I | No |
ClinGen gnomAD |
|
|
rs777307453 CA5164029 |
69 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA5164031 rs770346055 |
73 | G>D | No |
ClinGen ExAC gnomAD |
|
|
CA5164032 rs141742964 |
76 | K>N | No |
ClinGen ESP ExAC gnomAD |
|
|
CA5164033 rs745778970 |
78 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs113600437 CA197297729 |
79 | V>A | No |
ClinGen Ensembl |
|
|
CA5164034 rs772178039 |
81 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1342421682 CA374275093 |
82 | T>A | No |
ClinGen gnomAD |
|
|
CA374275101 rs1236304618 |
82 | T>S | No |
ClinGen gnomAD |
|
|
CA374275176 rs1202967392 |
87 | D>G | No |
ClinGen gnomAD |
|
| TCGA novel | 87 | D>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374275168 rs1482716825 |
87 | D>Y | No |
ClinGen gnomAD |
|
|
rs773310415 CA5164038 |
88 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1046241661 CA197297749 |
88 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1198183754 CA374275633 |
89 | K>E | No |
ClinGen gnomAD |
|
|
CA374275647 rs763300920 CA5164039 |
89 | K>N | No |
ClinGen ExAC gnomAD |
|
|
CA5164040 rs766433128 |
90 | Q>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs766433128 CA374275665 |
90 | Q>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374275681 rs1174709534 |
91 | S>G | No |
ClinGen gnomAD |
|
|
CA5164041 rs751684382 |
97 | V>I | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 98 | H>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5164042 rs755444333 |
98 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA374275875 rs1397763158 |
101 | I>L | No |
ClinGen gnomAD |
|
|
rs1458888019 CA374275899 |
102 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs768040662 CA5164043 |
103 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1337044942 CA374276096 |
108 | V>I | No |
ClinGen gnomAD |
|
|
CA5164068 rs778733809 |
109 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs376791512 CA197303775 |
109 | I>T | No |
ClinGen ESP TOPMed |
|
|
rs1214334749 CA374276104 |
109 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs79656676 CA197303778 |
110 | G>C | No |
ClinGen Ensembl |
|
|
rs1463708870 CA374276117 |
111 | G>S | No |
ClinGen gnomAD |
|
| TCGA novel | 112 | R>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749896885 CA5164069 |
113 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs779678324 CA5164071 |
116 | L>S | No |
ClinGen ExAC gnomAD |
|
|
rs746903710 CA5164072 |
123 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs746903710 CA374276273 |
123 | N>T | No |
ClinGen ExAC gnomAD |
|
|
RCV000969897 rs61755310 CA5164073 |
124 | N>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA374276327 rs1210434426 |
128 | Q>P | No |
ClinGen TOPMed |
|
|
rs554183025 CA5164076 |
131 | F>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs774567646 CA5164077 |
132 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
rs1395168256 CA374276378 |
133 | S>C | No |
ClinGen gnomAD |
|
|
CA374276379 rs1395168256 |
133 | S>F | No |
ClinGen gnomAD |
|
|
rs1008551755 CA197303852 |
140 | N>H | No |
ClinGen Ensembl |
|
|
CA5164079 rs772127542 |
141 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1006087229 CA197303872 |
142 | H>N | No |
ClinGen TOPMed gnomAD |
|
|
rs377071933 CA5164080 |
146 | M>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs777202321 CA5164102 |
149 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs762474355 CA5164103 |
149 | R>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374276600 rs1479378211 |
151 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA374276597 rs1479378211 |
151 | T>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1462299301 CA374276603 |
152 | K>E | No |
ClinGen gnomAD |
|
|
CA374276626 rs1410418176 |
153 | V>I | No |
ClinGen TOPMed |
|
| TCGA novel | 154 | L>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs948795706 CA197304694 |
157 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA374276724 rs1170522452 |
160 | E>Q | No |
ClinGen TOPMed |
|
| TCGA novel | 161 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1363207747 CA374276809 |
161 | I>N | No |
ClinGen TOPMed |
|
|
rs1363207747 CA374276813 |
161 | I>T | No |
ClinGen TOPMed |
|
|
CA374276852 rs1390084155 |
164 | M>I | No |
ClinGen TOPMed |
|
|
rs1229840254 CA374276842 |
164 | M>V | No |
ClinGen gnomAD |
|
|
CA5164124 rs182149326 |
165 | I>M | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
| TCGA novel | 166 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs146270183 CA5164125 |
167 | E>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374276940 rs1445660905 |
172 | R>G | No |
ClinGen Ensembl |
|
|
rs1037921343 CA197305109 |
176 | Y>* | No |
ClinGen Ensembl |
|
|
CA197305108 rs368900789 |
176 | Y>C | No |
ClinGen ESP TOPMed |
|
|
rs140049238 CA5164128 |
179 | I>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| rs1190851291 | 179 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs373566631 CA5164129 |
179 | I>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs140049238 CA5164127 |
179 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5164130 rs764044934 |
180 | A>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 182 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374277013 rs1360162781 |
182 | Q>R | No |
ClinGen TOPMed |
|
|
CA374277030 rs1268755623 |
184 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1268755623 CA374277028 |
184 | T>N | No |
ClinGen TOPMed gnomAD |
|
|
CA374277036 rs1215691385 |
185 | I>K | No |
ClinGen gnomAD |
|
|
CA374277032 rs1564069569 |
185 | I>V | No |
ClinGen Ensembl |
|
|
rs1019395053 CA197305134 |
186 | E>A | No |
ClinGen Ensembl |
|
|
rs1564069590 CA374277038 COSM13928 |
186 | E>K | skin [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
CA5164131 rs753576647 |
190 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164132 rs757082503 |
195 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs778642908 CA5164133 |
196 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs1274728081 CA374277118 |
197 | T>A | No |
ClinGen gnomAD |
|
|
rs200540431 CA374277119 |
197 | T>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164134 COSM1103430 rs200540431 COSM1103431 |
197 | T>M | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA374277980 rs1333884038 |
201 | E>K | No |
ClinGen gnomAD |
|
|
CA5164157 rs749782940 |
202 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs367818044 CA5164158 |
205 | P>L | No |
ClinGen ESP ExAC gnomAD |
|
|
CA374278065 rs1355581416 |
206 | T>A | No |
ClinGen gnomAD |
|
|
rs1237649413 CA374278078 |
207 | I>F | No |
ClinGen TOPMed gnomAD |
|
|
rs1237649413 CA374278076 |
207 | I>V | No |
ClinGen TOPMed gnomAD |
|
|
rs1352358378 CA374278152 |
211 | K>R | No |
ClinGen gnomAD |
|
|
CA5164185 rs567910817 |
213 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164186 COSM1103432 COSM1103433 rs747631183 |
215 | S>L | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs143564986 CA5164188 |
217 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA197307017 rs143564986 |
217 | Y>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5164189 rs763050068 |
219 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374278744 rs1467319232 |
220 | Y>* | No |
ClinGen TOPMed |
|
|
rs199963799 CA197307039 |
223 | V>I | No |
ClinGen Ensembl |
|
|
CA374278820 rs1442881154 |
224 | M>T | No |
ClinGen gnomAD |
|
|
rs372395337 CA197307045 |
227 | I>M | No |
ClinGen Ensembl |
|
|
CA5164190 rs766262481 |
227 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1034504889 CA197307054 |
231 | S>G | No |
ClinGen Ensembl |
|
|
CA5164191 rs774329965 |
231 | S>R | No |
ClinGen ExAC gnomAD |
|
|
rs1225165289 CA374279005 |
232 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA5164192 rs760941119 COSM1459028 COSM1459029 |
232 | R>H | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA374279029 rs1340184928 |
234 | Y>C | No |
ClinGen gnomAD |
|
|
CA374279079 rs764245140 |
236 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 236 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs764245140 CA5164194 |
236 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164195 rs753899101 |
237 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
rs765428640 CA5164197 |
238 | Q>R | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 240 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5164198 rs750919073 |
241 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA197307127 rs993032742 |
242 | A>S | No |
ClinGen Ensembl |
|
|
CA5164199 rs540966382 |
242 | A>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5164200 rs767457806 |
243 | E>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164201 rs201613718 |
244 | D>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs756988255 CA374279299 |
245 | T>I | No |
ClinGen ExAC gnomAD |
|
|
rs756988255 CA5164202 |
245 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs1319540048 CA374279339 |
248 | R>C | No |
ClinGen TOPMed |
|
|
rs148946777 CA5164203 |
248 | R>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5164204 rs148946777 |
248 | R>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1222337384 CA374279374 |
250 | A>T | No |
ClinGen TOPMed |
|
|
rs560803104 CA5164205 |
252 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5164206 rs772835208 |
256 | M>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374279525 rs1383972635 |
256 | M>T | No |
ClinGen TOPMed gnomAD |
|
|
CA374279558 rs1320269861 |
257 | Q>R | No |
ClinGen gnomAD |
|
|
rs967317989 CA374279666 |
262 | K>N | No |
ClinGen gnomAD |
|
|
CA5164207 rs749214431 |
264 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1564072726 CA374279776 |
268 | S>F | No |
ClinGen Ensembl |
|
|
rs201081276 COSM3716187 COSM3716186 CA5164209 |
274 | I>M | upper_aerodigestive_tract [Cosmic] | No |
ClinGen cosmic curated ExAC |
| TCGA novel | 274 | I>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs771025327 CA5164208 |
274 | I>R | No |
ClinGen ExAC gnomAD |
|
|
CA5164210 rs759417795 |
275 | K>I | No |
ClinGen ExAC gnomAD |
|
|
rs978828938 CA374279916 |
275 | K>N | No |
ClinGen Ensembl |
|
|
CA374279926 rs1207238672 |
276 | A>E | No |
ClinGen TOPMed gnomAD |
|
|
CA5164212 rs764311792 |
276 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1207238672 CA374279930 |
276 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
RCV000915474 CA5164214 rs61755103 |
277 | L>F | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs750539371 CA5164216 |
278 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1475862295 CA374279966 |
279 | H>R | No |
ClinGen gnomAD |
|
|
CA5164217 rs758860924 |
281 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA374280002 rs1362805829 |
282 | E>K | No |
ClinGen gnomAD |
|
|
CA374280019 rs1451414461 |
283 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
CA5164219 rs751860347 |
287 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs755301933 CA5164220 |
287 | R>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781668942 CA5164221 |
287 | R>S | No |
ClinGen ExAC gnomAD |
|
|
rs1280492655 CA374280097 |
288 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
rs752276825 CA374280108 |
289 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164222 rs752276825 |
289 | D>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 292 | T>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374280778 rs1290950637 |
294 | G>D | No |
ClinGen TOPMed |
|
|
rs369190262 CA5164266 |
295 | I>T | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1305283350 CA374280797 |
296 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
RCV001314913 rs761107909 CA5164267 |
297 | R>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ClinVar ExAC NCI-TCGA dbSNP gnomAD |
|
rs1258350155 CA374280817 |
297 | R>P | No |
ClinGen TOPMed gnomAD |
|
|
CA374280814 rs1258350155 |
297 | R>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs146955946 CA5164268 |
298 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs757022801 CA374280859 |
301 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs757022801 CA5164270 |
301 | D>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1185888119 CA374280865 |
302 | A>G | No |
ClinGen gnomAD |
|
|
rs764814020 CA374280863 |
302 | A>P | No |
ClinGen ExAC gnomAD |
|
|
rs764814020 CA5164271 |
302 | A>S | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
CA374280866 rs1185888119 |
302 | A>V | No |
ClinGen gnomAD |
|
|
rs758216677 CA5164273 |
303 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1171432338 CA374280876 |
304 | A>G | No |
ClinGen gnomAD |
|
|
CA5164275 rs746713433 |
306 | A>S | No |
ClinGen ExAC gnomAD |
|
|
CA5164276 rs754760774 |
308 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA197307682 rs915217294 |
309 | V>F | No |
ClinGen TOPMed |
|
|
rs749487482 CA5164278 |
311 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA5164279 rs771183137 |
313 | S>C | No |
ClinGen ExAC gnomAD |
|
|
rs771183137 CA374280933 |
313 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs774373948 CA5164280 |
314 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA5164281 rs745974283 |
315 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs199917130 CA197307755 |
316 | A>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs199917130 CA5164283 |
316 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs34755397 CA5164284 |
318 | D>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374280972 rs1291528879 |
319 | L>R | No |
ClinGen gnomAD |
|
|
rs1172254029 CA374280981 |
321 | K>E | No |
ClinGen TOPMed |
|
|
rs1465706165 CA374280990 |
322 | K>E | No |
ClinGen TOPMed |
|
|
CA5164287 rs138115955 RCV000973434 |
325 | A>T | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs765008229 CA5164288 |
326 | C>G | No |
ClinGen ExAC gnomAD |
|
|
rs545573886 CA5164289 |
327 | E>K | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1479255559 CA374281038 |
329 | S>G | No |
ClinGen TOPMed |
|
|
rs757927242 CA5164290 |
329 | S>N | No |
ClinGen ExAC gnomAD |
|
|
rs1167400493 CA374281048 |
330 | K>R | No |
ClinGen gnomAD |
|
|
rs180923911 CA5164291 COSM1459037 COSM1459036 |
331 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
rs751500565 CA5164292 |
331 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA5164293 rs754955939 |
333 | E>K | No |
ClinGen ExAC gnomAD |
|
|
rs1347523516 CA374281094 |
334 | L>Q | No |
ClinGen gnomAD |
|
|
rs1040907916 CA197307845 |
338 | M>T | No |
ClinGen TOPMed |
|
|
CA374281144 rs1401156819 |
338 | M>V | No |
ClinGen gnomAD |
|
|
CA374281183 rs1312733359 |
340 | E>D | No |
ClinGen gnomAD |
|
|
rs1277576551 CA374283680 |
341 | D>G | No |
ClinGen TOPMed |
|
|
rs933925280 CA197315477 |
344 | T>I | No |
ClinGen gnomAD |
|
|
rs752423202 CA5164315 |
348 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs777489147 CA5164317 |
351 | E>* | No |
ClinGen ExAC |
|
| TCGA novel | 351 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA197315506 rs141160131 |
352 | V>F | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs1292285535 CA374283899 |
353 | K>R | No |
ClinGen TOPMed |
|
| TCGA novel | 354 | K>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1437243775 CA374283933 |
355 | I>L | No |
ClinGen TOPMed gnomAD |
|
|
rs1437243775 CA374283931 |
355 | I>V | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 356 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1179965149 CA374283960 |
357 | D>G | No |
ClinGen TOPMed gnomAD |
|
|
rs376093249 CA5164318 |
359 | L>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs780145094 CA5164320 |
360 | H>Y | No |
ClinGen ExAC gnomAD |
|
|
CA374284021 rs1393873596 |
361 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1393873596 CA374284016 |
361 | A>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
| TCGA novel | 364 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747112609 CA5164321 |
366 | S>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 368 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5164322 rs769232155 |
369 | D>V | No |
ClinGen ExAC gnomAD |
|
|
CA5164324 rs564322861 |
370 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA5164325 rs770178646 |
372 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs762632542 CA5164327 |
374 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA5164328 rs770521510 |
376 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 378 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1194128126 CA374284320 |
379 | H>N | No |
ClinGen gnomAD |
|
|
rs868154702 CA197315611 |
379 | H>R | No |
ClinGen Ensembl |
|
|
CA374284354 rs773800424 |
381 | N>I | No |
ClinGen ExAC gnomAD |
|
|
rs773800424 COSM4163173 COSM4163172 CA5164329 |
381 | N>S | thyroid [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA5164330 rs375645056 |
382 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374284382 rs1376968987 |
384 | S>A | No |
ClinGen gnomAD |
|
|
rs760655816 CA5164333 |
385 | A>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs760655816 CA5164334 |
385 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA374284395 rs1200233383 |
385 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs753609822 CA5164335 |
387 | L>M | No |
ClinGen ExAC gnomAD |
|
|
CA5164336 rs201880531 |
388 | S>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs201880531 CA374284423 |
388 | S>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1474818592 CA374284419 |
388 | S>P | No |
ClinGen gnomAD |
|
|
rs780156200 CA5164337 |
389 | S>N | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 391 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA197315651 rs960881407 |
392 | D>G | No |
ClinGen Ensembl |
|
|
rs755100222 CA5164339 |
394 | A>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374284515 rs1388345860 |
396 | A>T | No |
ClinGen gnomAD |
|
|
CA197315658 rs367743590 |
396 | A>V | No |
ClinGen TOPMed |
|
|
rs781477090 CA197315682 |
398 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164340 rs781477090 |
398 | L>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA5164341 rs748641374 |
399 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA374284560 rs149471302 |
400 | G>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5164342 rs149471302 |
400 | G>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs144046688 CA5164343 |
402 | M>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374284633 rs1401714427 |
405 | C>W | No |
ClinGen TOPMed |
|
|
CA374284645 rs1189477597 |
406 | K>R | No |
ClinGen Ensembl |
|
| TCGA novel | 407 | N>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749636234 CA5164344 |
409 | I>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374284720 rs1232935382 |
412 | A>G | No |
ClinGen TOPMed gnomAD |
|
|
CA374284722 rs1232935382 |
412 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
CA5164345 rs770558864 |
413 | Q>E | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA |
|
CA197315754 rs780008274 |
415 | E>K | No |
ClinGen Ensembl |
|
|
rs1253720492 CA374285425 |
419 | A>T | No |
ClinGen gnomAD |
|
|
CA5164367 rs564129335 |
424 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1363014864 CA374285485 |
427 | Q>P | No |
ClinGen gnomAD |
|
|
rs745491224 CA5164368 |
428 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs745491224 CA5164369 |
428 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164370 rs531941465 |
432 | N>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA5164371 rs746519184 |
434 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs776424588 CA5164373 |
436 | E>A | No |
ClinGen ExAC gnomAD |
|
|
CA5164374 rs761864328 |
439 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs765098627 CA5164375 |
441 | D>N | No |
ClinGen ExAC gnomAD |
|
|
rs773178865 CA5164376 |
442 | S>G | No |
ClinGen ExAC gnomAD |
|
|
rs767873506 CA5164378 |
444 | Y>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164377 rs759790525 |
444 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1587937529 CA374285642 |
445 | R>K | No |
ClinGen Ensembl |
|
| TCGA novel | 449 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA197317474 rs375181843 |
449 | E>D | No |
ClinGen ESP TOPMed gnomAD |
|
|
rs372310010 CA374285716 |
450 | A>G | No |
ClinGen TOPMed |
|
|
rs372310010 CA197317492 |
450 | A>V | No |
ClinGen TOPMed |
|
|
CA374285722 rs1489612426 |
451 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs756153101 CA5164380 |
453 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs764293352 CA5164381 |
454 | V>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA197317495 rs868200088 |
457 | L>I | No |
ClinGen Ensembl |
|
|
CA374285811 rs1173473656 |
457 | L>P | No |
ClinGen TOPMed |
|
|
CA5164383 rs757824607 |
458 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs779211029 CA5164384 |
459 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374285831 rs1380903849 |
459 | E>K | No |
ClinGen TOPMed gnomAD |
|
|
rs746255469 CA5164385 |
461 | L>F | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA590045979 rs1361002207 |
461 | L>IYD* | No |
ClinGen gnomAD |
|
|
rs757990935 CA5164386 |
462 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA5164387 rs779689461 |
464 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs61762664 CA5164388 |
465 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA374285917 rs1398336625 |
465 | M>T | No |
ClinGen gnomAD |
|
|
CA5164389 rs768034031 |
467 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA5164390 rs369822773 |
467 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5164391 rs748001380 |
468 | L>P | No |
ClinGen ExAC gnomAD |
|
|
rs1233305273 CA374285974 |
469 | N>S | No |
ClinGen gnomAD |
|
|
rs77050953 CA5164393 |
470 | Y>C | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs77050953 CA5164394 |
470 | Y>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5164392 rs769881830 |
470 | Y>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed |
|
CA374286003 rs1200075998 |
471 | E>G | No |
ClinGen gnomAD |
|
|
rs1358385053 CA374286121 |
475 | E>V | No |
ClinGen TOPMed |
|
|
CA374286137 rs1478818737 |
477 | S>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs749304562 CA5164415 |
477 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs770827404 CA374286148 |
479 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA5164419 rs768947235 |
482 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776518199 CA5164421 COSM126323 |
482 | R>H | upper_aerodigestive_tract Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA5164420 rs776518199 |
482 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374286175 rs1430648534 |
483 | R>K | No |
ClinGen gnomAD |
|
|
rs148257629 CA5164422 |
485 | L>P | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 486 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5164423 rs750921145 |
487 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1401285860 CA374286200 |
487 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA374286207 rs1413439065 |
488 | D>G | No |
ClinGen TOPMed |
|
|
CA5164424 rs763495522 |
493 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA374286246 rs1178309380 |
494 | E>Q | No |
ClinGen TOPMed |
|
|
COSM1553794 COSM1553795 CA5164426 rs751981726 |
496 | Y>C | lung Variant assessed as Somatic; 0.0003259 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
rs780909705 CA5164428 |
498 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1194473918 CA374286280 |
499 | L>V | No |
ClinGen gnomAD |
|
|
CA374286295 rs1183748760 |
501 | A>G | No |
ClinGen gnomAD |
|
|
CA374286291 rs1471941160 |
501 | A>T | No |
ClinGen gnomAD |
|
|
CA374286307 rs1267738929 |
503 | F>S | No |
ClinGen TOPMed |
|
|
rs376463312 CA5164429 |
505 | N>D | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5164430 rs755680693 |
505 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1157436912 CA374286331 |
507 | R>* | No |
ClinGen gnomAD |
|
|
rs370550727 CA5164432 |
507 | R>P | No |
ClinGen ESP ExAC gnomAD |
|
|
rs370550727 CA5164431 |
507 | R>Q | No |
ClinGen ESP ExAC gnomAD |
|
|
CA5164434 rs778526245 |
509 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA5164453 rs565543975 |
512 | D>N | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs565543975 CA197320745 |
512 | D>Y | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs1343024569 CA374286497 |
513 | P>A | No |
ClinGen gnomAD |
|
|
rs117674294 CA5164455 |
514 | E>G | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5164454 rs528014102 |
514 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA374286518 rs1457471933 |
515 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
CA374286586 rs1196916373 |
518 | N>K | No |
ClinGen gnomAD |
|
|
CA197320748 rs958923640 |
519 | R>K | No |
ClinGen Ensembl |
|
|
CA5164456 rs748334171 |
520 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA374286624 rs1453757455 |
521 | C>F | No |
ClinGen gnomAD |
|
|
rs1013486610 CA197320754 |
523 | K>T | No |
ClinGen Ensembl |
|
| TCGA novel | 525 | L>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5164457 rs770031875 |
525 | L>H | No |
ClinGen ExAC gnomAD |
|
|
CA5164458 rs201083116 |
528 | S>F | No |
ClinGen ExAC gnomAD |
|
|
rs771273932 CA5164460 |
530 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1404721944 CA374286781 |
534 | D>H | No |
ClinGen TOPMed |
|
|
rs547023955 CA197320783 |
535 | T>A | No |
ClinGen Ensembl |
|
|
CA5164463 rs767892508 |
535 | T>N | No |
ClinGen ExAC gnomAD |
|
|
rs370728212 CA197320801 |
536 | S>F | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs370728212 CA5164464 |
536 | S>Y | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs867308548 CA197320828 |
537 | A>E | No |
ClinGen Ensembl |
|
|
CA5164466 rs763851296 |
538 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 541 | L>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374286881 rs1455326010 |
542 | E>V | No |
ClinGen TOPMed |
|
|
rs753330404 CA5164467 |
545 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA374286923 rs753330404 |
545 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA5164469 rs764708428 |
547 | E>G | No |
ClinGen ExAC gnomAD |
|
|
CA5164470 rs750348729 |
548 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA197320879 rs1056377483 |
550 | Y>C | No |
ClinGen TOPMed gnomAD |
|
|
CA5164472 rs779787783 |
550 | Y>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756274323 CA5164474 |
551 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs61755104 CA197320884 |
552 | V>F | No |
ClinGen TOPMed |
|
|
rs61755309 CA5164475 |
553 | V>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5164476 rs61755309 |
553 | V>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5164477 rs749789398 |
556 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374287025 rs1587942209 |
557 | E>D | No |
ClinGen Ensembl |
|
|
rs1428758652 CA374287080 |
558 | V>I | No |
ClinGen gnomAD |
|
|
CA197322239 rs1022801445 |
560 | G>V | No |
ClinGen Ensembl |
|
| TCGA novel | 565 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA197322262 CA374287201 rs374741734 |
566 | R>S | No |
ClinGen ESP TOPMed gnomAD |
|
|
CA197322280 rs905810912 |
567 | G>R | No |
ClinGen Ensembl |
|
|
rs1385676483 CA374287227 |
568 | E>D | No |
ClinGen TOPMed gnomAD |
|
| rs1359789229 | 568 | E>G | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs745947609 COSM1624372 CA5164505 COSM1624373 |
568 | E>Q | liver [Cosmic] | No |
ClinGen cosmic curated ExAC gnomAD |
|
CA5164506 rs772638726 COSM1103436 COSM1103437 |
571 | R>C | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA5164507 rs367564983 |
571 | R>H | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA5164509 rs200921540 |
572 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1103440 CA197322325 rs905096447 COSM1103441 |
573 | Y>C | Variant assessed as Somatic; impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
CA5164511 rs761490427 |
574 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1287544583 CA374287297 |
574 | T>I | No |
ClinGen gnomAD |
|
|
CA5164512 rs761490427 |
574 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164513 rs375330343 |
575 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374287326 rs1361437208 |
576 | I>M | No |
ClinGen gnomAD |
|
|
CA5164514 rs762377635 |
577 | P>L | No |
ClinGen ExAC gnomAD |
|
|
CA374287352 rs1480051421 |
579 | N>H | No |
ClinGen TOPMed |
|
|
rs759519328 CA5164517 |
579 | N>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 580 | K>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs767269599 CA5164518 |
584 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs988464594 CA197322412 |
584 | R>S | No |
ClinGen TOPMed gnomAD |
|
|
rs752456956 CA5164519 |
585 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs757442132 CA5164520 |
585 | C>S | No |
ClinGen ExAC gnomAD |
|
|
CA374287453 rs1192692708 |
586 | I>V | No |
ClinGen TOPMed |
|
|
rs1465589429 CA374287474 |
587 | A>V | No |
ClinGen gnomAD |
|
| TCGA novel | 589 | E>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5164523 rs373121324 |
590 | T>S | No |
ClinGen ESP ExAC |
|
|
CA374287526 rs780327985 |
591 | L>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164524 rs780327985 |
591 | L>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374287521 rs1250429411 |
591 | L>V | No |
ClinGen TOPMed |
|
|
CA374287527 rs1453912808 |
592 | R>G | No |
ClinGen gnomAD |
|
|
rs1331119788 CA374287556 |
593 | V>D | No |
ClinGen gnomAD |
|
|
CA5164526 rs747484594 |
593 | V>I | No |
ClinGen ExAC |
|
|
CA5164527 rs376298987 |
594 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1242985754 CA374287580 |
595 | Q>R | No |
ClinGen gnomAD |
|
|
rs1258112782 CA374287607 |
597 | L>V | No |
ClinGen TOPMed |
|
|
rs748758756 CA5164560 |
599 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756423115 CA5164561 |
599 | G>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs187855168 CA197323765 |
601 | D>N | No |
ClinGen 1000Genomes |
|
|
rs146281336 CA5164563 CA5164564 |
602 | N>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1421356520 CA374287840 |
602 | N>S | No |
ClinGen TOPMed |
|
|
CA374287842 rs773792221 |
603 | V>F | No |
ClinGen ExAC gnomAD |
|
|
CA5164565 rs773792221 |
603 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs773792221 CA374287843 |
603 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs757537511 CA5164566 |
604 | H>Q | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1475504948 CA374287863 |
606 | A>G | No |
ClinGen Ensembl |
|
|
CA5164567 rs771678803 |
606 | A>S | No |
ClinGen ExAC gnomAD |
|
|
rs1215027199 CA374287865 |
607 | L>I | No |
ClinGen TOPMed |
|
|
rs1215909680 CA374287883 |
609 | L>F | No |
ClinGen gnomAD |
|
|
rs1587954406 CA374287893 |
611 | E>A | No |
ClinGen Ensembl |
|
|
CA197323842 rs958700363 |
611 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
CA5164570 rs529040950 |
614 | P>L | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs776595054 CA5164571 |
617 | Q>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA197323853 rs76421718 |
619 | A>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5164572 RCV000949539 rs76421718 |
619 | A>S | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
CA374287947 rs76421718 |
619 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs143609098 CA5164573 |
619 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1261373411 CA374287971 |
622 | F>S | No |
ClinGen gnomAD |
|
|
rs1276769616 CA374287976 |
623 | V>L | No |
ClinGen TOPMed |
|
|
rs751626872 CA5164574 |
626 | T>R | No |
ClinGen ExAC gnomAD |
|
|
rs766677630 CA197323880 |
627 | T>A | No |
ClinGen Ensembl |
|
| TCGA novel | 628 | F>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374288031 rs1330642800 |
631 | D>G | No |
ClinGen TOPMed |
|
|
CA5164576 rs767697615 |
632 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1356124135 CA374288049 |
633 | M>I | No |
ClinGen TOPMed |
|
|
rs753123238 CA5164578 |
633 | M>T | No |
ClinGen ExAC gnomAD |
|
|
rs1366728810 CA374288043 |
633 | M>V | No |
ClinGen gnomAD |
|
|
CA5164579 rs756686738 |
634 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756686738 CA197323903 |
634 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164580 rs777959814 |
635 | N>Y | No |
ClinGen ExAC gnomAD |
|
|
COSM1459045 CA5164581 COSM1459044 rs754224682 |
636 | A>V | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 639 | V>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs139309078 CA5164583 |
640 | A>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs139309078 CA374288090 |
640 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs745577163 CA5164584 |
641 | F>L | No |
ClinGen ExAC gnomAD |
|
|
CA5164585 rs771457863 |
642 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374288113 rs1360050606 |
643 | K>R | No |
ClinGen gnomAD |
|
|
CA374288124 rs746877120 |
645 | I>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs776513663 CA5164589 |
645 | I>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164588 rs768657081 |
645 | I>R | No |
ClinGen ExAC gnomAD |
|
|
CA5164587 rs746877120 |
645 | I>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374288143 rs1437244733 |
648 | R>G | No |
ClinGen gnomAD |
|
|
CA374288156 rs1310755491 |
650 | V>I | No |
ClinGen TOPMed |
|
|
CA374288174 rs1482520681 |
653 | G>R | No |
ClinGen gnomAD |
|
|
CA374288198 rs1439630675 |
656 | V>A | No |
ClinGen gnomAD |
|
|
rs769781627 CA5164591 |
656 | V>M | No |
ClinGen ExAC gnomAD |
|
|
CA374288204 rs1157344662 |
657 | F>C | No |
ClinGen gnomAD |
|
|
rs1004780388 CA197323982 |
660 | H>P | No |
ClinGen TOPMed gnomAD |
|
|
CA374288224 rs1004780388 |
660 | H>R | No |
ClinGen TOPMed gnomAD |
|
|
CA5164593 rs374570493 |
660 | H>Y | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 662 | T>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs968188553 CA197323990 |
664 | S>N | No |
ClinGen Ensembl |
|
|
rs767283364 CA374288505 |
668 | R>G | No |
ClinGen gnomAD |
|
|
rs779375255 CA197325124 |
668 | R>Q | No |
ClinGen gnomAD |
|
|
CA374288532 rs1244540039 |
670 | Q>R | No |
ClinGen gnomAD |
|
|
rs750817612 CA5164620 |
671 | A>E | No |
ClinGen ExAC gnomAD |
|
|
CA374288568 rs1275787879 |
673 | S>A | No |
ClinGen gnomAD |
|
|
rs888494864 CA197325134 |
674 | I>T | No |
ClinGen TOPMed |
|
|
rs374266125 CA374288630 |
677 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374288641 rs1198693178 |
678 | F>C | No |
ClinGen gnomAD |
|
|
CA5164622 rs766064050 |
679 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs1479141994 CA374288668 |
681 | L>R | No |
ClinGen TOPMed gnomAD |
|
|
rs754501045 CA5164624 |
682 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164625 rs780902402 |
684 | V>I | No |
ClinGen ExAC gnomAD |
|
|
rs748069141 CA5164626 |
685 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs536652729 CA197325200 |
689 | R>K | No |
ClinGen 1000Genomes |
|
|
rs368177715 CA5164629 |
691 | K>E | No |
ClinGen ESP ExAC gnomAD |
|
| TCGA novel | 692 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs752667607 CA197325208 |
693 | N>D | No |
ClinGen Ensembl |
|
|
rs770697414 CA5164630 |
693 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374288855 rs145598831 |
696 | R>G | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs149999543 CA374288859 |
696 | R>P | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5164632 rs149999543 |
696 | R>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
COSM1103442 CA5164631 COSM1103443 rs145598831 |
696 | R>W | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
CA5164634 rs776720159 |
697 | A>G | No |
ClinGen ExAC gnomAD |
|
|
CA374288884 rs1349174230 |
699 | E>K | No |
ClinGen TOPMed |
|
|
COSM1314330 rs1340444872 COSM1314331 CA374288903 |
700 | E>K | Variant assessed as Somatic; 0.0 impact. urinary_tract [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
rs765743184 CA5164636 |
702 | L>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 703 | A>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs773378335 CA5164637 |
703 | A>T | No |
ClinGen ExAC gnomAD |
|
|
CA197325278 rs902192890 |
704 | G>S | No |
ClinGen TOPMed gnomAD |
|
|
rs999566005 CA197325290 |
705 | L>P | No |
ClinGen gnomAD |
|
| TCGA novel | 707 | N>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5164641 rs751204383 |
708 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1190531795 CA374289020 |
708 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA374289021 rs1190531795 |
708 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
CA5164643 rs754721023 |
709 | A>D | No |
ClinGen ExAC gnomAD |
|
|
CA5164642 rs754721023 |
709 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs142563992 CA5164671 |
711 | K>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs755121798 COSM382595 CA5164672 COSM382594 |
713 | R>C | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA5164673 rs781384156 |
713 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164674 rs201329464 |
716 | K>Q | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA374290178 rs1237461518 |
717 | Q>E | No |
ClinGen gnomAD |
|
|
rs200332660 CA5164675 |
717 | Q>H | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs749766716 CA5164677 |
719 | W>R | No |
ClinGen ExAC gnomAD |
|
|
CA5164678 rs771365550 |
720 | E>* | No |
ClinGen ExAC gnomAD |
|
|
CA374290242 rs771365550 |
720 | E>K | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 721 | M>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs774719559 CA5164679 |
727 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs1178333992 CA374290465 |
733 | L>I | No |
ClinGen TOPMed |
|
|
rs1408826835 CA374290477 |
734 | Q>R | No |
ClinGen TOPMed gnomAD |
|
|
CA197327828 rs868030541 |
736 | S>R | No |
ClinGen Ensembl |
|
|
CA5164681 rs772632686 |
737 | S>P | No |
ClinGen ExAC gnomAD |
|
|
CA5164683 rs760442084 |
738 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1308520267 CA374290531 |
739 | H>D | No |
ClinGen gnomAD |
|
|
rs753307179 CA5164685 |
739 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA374290566 rs1473334121 |
742 | Q>R | No |
ClinGen gnomAD |
|
| TCGA novel | 744 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs201775203 CA5164687 |
751 | T>A | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374290669 rs1564103092 |
751 | T>N | No |
ClinGen Ensembl |
|
| rs1257129093 | 751 | T>P | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374290672 rs1564103102 |
752 | I>V | No |
ClinGen Ensembl |
|
|
CA374290687 rs1251365325 |
753 | E>Q | No |
ClinGen gnomAD |
|
|
CA5164719 rs758995648 |
754 | E>Q | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs780507949 CA5164720 |
759 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs915779719 CA197329166 |
763 | K>E | No |
ClinGen TOPMed |
|
|
CA374291162 rs915779719 |
763 | K>Q | No |
ClinGen TOPMed |
|
|
CA374291204 rs1490519325 |
767 | R>G | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 767 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs747335066 CA5164721 |
767 | R>K | No |
ClinGen ExAC gnomAD |
|
|
rs533007517 CA5164722 |
768 | K>Q | No |
ClinGen ExAC gnomAD |
|
|
rs1266414745 CA374291225 |
769 | A>T | No |
ClinGen TOPMed |
|
|
rs1587975887 CA374291239 |
770 | E>G | No |
ClinGen Ensembl |
|
|
COSM455078 CA5164723 rs776131090 COSM455079 |
770 | E>K | Variant assessed as Somatic; 4.653e-05 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
CA5164726 rs144804318 |
777 | E>K | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA197329237 rs968544978 |
778 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs762832036 CA5164728 |
782 | N>H | No |
ClinGen ExAC |
|
|
rs1386611191 CA374291409 |
784 | E>D | No |
ClinGen gnomAD |
|
|
CA5164730 rs774065596 |
785 | A>G | No |
ClinGen ExAC gnomAD |
|
|
rs147960477 CA5164729 |
785 | A>T | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5164732 rs767405439 |
787 | R>G | No |
ClinGen ExAC gnomAD |
|
|
CA197329271 rs924705333 |
788 | E>A | No |
ClinGen TOPMed gnomAD |
|
|
CA5164733 rs376788348 |
789 | R>Q | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1317051608 CA374291467 |
791 | L>V | No |
ClinGen gnomAD |
|
|
CA374291480 rs1240214574 |
792 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1223290650 CA374291529 |
796 | K>R | No |
ClinGen gnomAD |
|
| TCGA novel | 798 | L>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs945417062 CA197329276 |
798 | L>V | No |
ClinGen Ensembl |
|
| TCGA novel | 799 | D>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5164736 rs750542706 |
799 | D>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1242942485 COSM370960 CA374291579 COSM370961 |
800 | C>F | lung [Cosmic] | No |
ClinGen cosmic curated gnomAD |
|
rs1242942485 CA374291575 |
800 | C>Y | No |
ClinGen gnomAD |
|
|
CA374291598 rs1460241113 |
802 | K>E | No |
ClinGen gnomAD |
|
|
rs1425663361 CA374291650 |
804 | K>T | No |
ClinGen TOPMed |
|
|
rs1186006686 CA374291659 |
805 | A>S | No |
ClinGen gnomAD |
|
|
CA374291675 rs1244287418 |
806 | D>G | No |
ClinGen gnomAD |
|
|
CA374291668 rs1356461557 |
806 | D>H | No |
ClinGen TOPMed gnomAD |
|
|
rs925398152 CA197329301 |
807 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1176136072 CA374291716 |
809 | S>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1176136072 CA374291718 |
809 | S>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1405072467 CA374291744 |
811 | K>R | No |
ClinGen gnomAD |
|
|
CA374291754 rs780698253 |
812 | M>K | No |
ClinGen ExAC gnomAD |
|
|
rs780698253 CA5164738 |
812 | M>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 816 | Q>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374291826 rs1290940811 |
816 | Q>H | No |
ClinGen TOPMed |
|
|
rs372968302 CA5164740 |
817 | Q>H | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1343883650 CA374292048 |
820 | E>Q | No |
ClinGen gnomAD |
|
|
CA374292102 rs1284357607 |
825 | E>Q | No |
ClinGen gnomAD |
|
|
rs1432383562 CA374292188 |
830 | K>E | No |
ClinGen TOPMed |
|
|
rs556871194 CA5164762 |
830 | K>R | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs751982454 CA5164763 |
832 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1173908872 CA374292262 |
834 | T>A | No |
ClinGen TOPMed |
|
|
CA374292279 rs1418808103 |
835 | S>Y | No |
ClinGen TOPMed |
|
|
rs781366175 CA5164765 |
837 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753121778 CA5164766 |
838 | Q>K | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374292382 rs1201086379 |
841 | E>D | No |
ClinGen gnomAD |
|
|
CA374292392 rs1587980914 |
842 | A>T | No |
ClinGen Ensembl |
|
|
CA5164768 rs777397842 |
842 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA5164769 rs749000276 |
843 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1421551829 CA374292444 |
846 | A>P | No |
ClinGen gnomAD |
|
|
rs778514799 CA5164771 |
846 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs200800207 CA197330558 |
847 | I>V | No |
ClinGen 1000Genomes |
|
|
rs369907847 CA5164773 |
849 | S>F | No |
ClinGen ESP ExAC gnomAD |
|
|
rs760538345 CA5164775 |
850 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164776 rs768625468 |
852 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA374292536 rs768625468 |
852 | S>G | No |
ClinGen ExAC gnomAD |
|
|
CA374292546 rs1225697037 |
852 | S>R | No |
ClinGen gnomAD |
|
|
CA5164778 rs763303418 |
857 | M>I | No |
ClinGen ExAC gnomAD |
|
|
CA374292611 rs1350341000 |
857 | M>T | No |
ClinGen TOPMed |
|
|
CA5164777 rs373788565 |
857 | M>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374292640 rs1259327799 |
858 | A>V | No |
ClinGen TOPMed |
|
|
CA374292654 rs1587981216 |
859 | A>G | No |
ClinGen Ensembl |
|
|
rs1587981227 CA374292694 |
861 | V>G | No |
ClinGen Ensembl |
|
|
CA197330612 rs78636739 |
862 | A>G | No |
ClinGen Ensembl |
|
|
COSM3413207 CA197330603 rs867223678 COSM3413208 |
862 | A>T | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated Ensembl |
|
rs892727294 CA197331038 |
866 | E>K | No |
ClinGen TOPMed |
|
|
CA5164807 rs11554260 |
867 | S>L | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1469608171 CA374293520 |
871 | A>V | No |
ClinGen gnomAD |
|
|
rs1385636562 CA374293594 |
874 | E>V | No |
ClinGen gnomAD |
|
|
rs775956025 CA5164808 |
875 | V>M | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374293622 rs1587983145 |
876 | T>I | No |
ClinGen Ensembl |
|
|
CA5164810 rs764390870 |
878 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs948684510 CA197331074 |
880 | E>D | No |
ClinGen gnomAD |
|
|
CA5164812 rs756792636 |
880 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA5164813 rs756792636 |
880 | E>Q | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 880 | E>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374293713 rs1291512075 |
881 | V>G | No |
ClinGen TOPMed |
|
|
CA5164814 rs750097797 |
881 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs890876303 CA197331079 |
883 | T>I | No |
ClinGen TOPMed |
|
|
rs757900289 CA5164815 |
885 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs1260962545 CA374293774 |
886 | D>N | No |
ClinGen gnomAD |
|
|
rs1380136867 CA374293801 |
887 | T>A | No |
ClinGen TOPMed |
|
|
rs1269860088 CA374293812 |
887 | T>I | No |
ClinGen TOPMed |
|
|
CA374293810 rs1269860088 |
887 | T>S | No |
ClinGen TOPMed |
|
|
CA197331097 rs867096425 |
888 | V>I | No |
ClinGen Ensembl |
|
|
rs779467663 CA5164816 |
889 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs1347327247 CA374293880 |
891 | A>D | No |
ClinGen TOPMed |
|
|
CA5164817 rs746900256 |
891 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1564109280 CA374293912 |
894 | A>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
| TCGA novel | 895 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 895 | E>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1461374127 CA374293981 |
899 | H>Y | No |
ClinGen TOPMed |
|
|
CA374293999 rs1249938288 |
900 | K>E | No |
ClinGen gnomAD |
|
|
CA374294021 rs1392989465 |
901 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed |
|
CA374294033 rs754989973 |
902 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
rs754989973 CA5164818 |
902 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
CA5164819 rs781080156 |
904 | N>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA5164820 rs201493765 |
904 | N>S | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
COSM3847229 COSM3847230 rs1480198372 CA374294077 |
905 | D>N | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
COSM1103449 COSM1103448 rs1174732035 CA374294101 |
906 | S>Y | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA5164822 rs774619405 |
907 | Q>L | No |
ClinGen ExAC gnomAD |
|
|
CA374294166 rs1298081261 |
911 | K>R | No |
ClinGen gnomAD |
|
|
CA5164823 rs746125688 |
913 | L>* | No |
ClinGen ExAC |
|
|
rs1309536051 CA374294188 |
913 | L>I | No |
ClinGen gnomAD |
|
|
rs370655070 CA5164824 |
914 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1184430757 CA374294233 |
916 | N>D | No |
ClinGen TOPMed |
|
|
CA197331139 rs963719576 |
916 | N>K | No |
ClinGen TOPMed gnomAD |
|
|
rs1476238254 CA374294238 |
916 | N>S | No |
ClinGen TOPMed |
|
|
rs1212912967 CA374294249 |
917 | I>V | No |
ClinGen TOPMed |
|
|
rs1281180482 CA374294262 |
918 | S>R | No |
ClinGen gnomAD |
|
|
rs761111335 CA5164826 |
918 | S>R | No |
ClinGen ExAC gnomAD |
|
|
CA5164828 rs764587095 |
920 | H>L | No |
ClinGen ExAC gnomAD |
|
|
CA374294299 rs764587095 |
920 | H>R | No |
ClinGen ExAC gnomAD |
|
|
CA5164830 rs559315136 |
922 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
rs777188494 CA5164829 |
922 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1564109644 CA374294373 |
925 | E>D | No |
ClinGen Ensembl |
|
|
rs750058411 CA5164832 |
929 | A>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1587990066 CA374294871 |
931 | V>G | No |
ClinGen Ensembl |
|
|
rs1223645202 CA374294865 |
931 | V>L | No |
ClinGen TOPMed |
|
|
CA5164855 rs751327918 |
934 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374294892 rs751327918 |
934 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1288103464 CA374294924 |
936 | K>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1022475090 CA197332349 |
937 | D>H | No |
ClinGen TOPMed |
|
|
rs759108029 CA5164856 |
937 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs564171583 CA5164857 |
938 | Y>C | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs564171583 CA5164858 |
938 | Y>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs577771068 CA5164861 |
939 | D>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs777577593 CA5164860 |
939 | D>H | No |
ClinGen ExAC gnomAD |
|
|
rs1292050298 CA374294969 |
941 | I>L | No |
ClinGen gnomAD |
|
|
rs1322561804 CA374294980 |
942 | N>Y | No |
ClinGen gnomAD |
|
|
rs1473065330 CA374295015 |
945 | R>T | No |
ClinGen TOPMed |
|
|
rs1323211062 CA374295024 |
946 | H>P | No |
ClinGen TOPMed gnomAD |
|
|
COSM1292762 CA5164863 rs140696209 COSM1292763 |
946 | H>Y | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ESP ExAC TOPMed gnomAD |
|
CA5164865 rs747280786 |
948 | F>C | No |
ClinGen ExAC gnomAD |
|
|
rs747280786 CA5164864 |
948 | F>S | No |
ClinGen ExAC gnomAD |
|
|
rs781278479 CA5164866 |
949 | G>R | No |
ClinGen ExAC gnomAD |
|
|
CA374295061 rs1443259536 |
950 | Q>R | No |
ClinGen gnomAD |
|
|
CA374295073 rs1470363706 |
951 | P>L | No |
ClinGen TOPMed |
|
|
CA5164867 rs539905204 |
951 | P>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1195293822 CA374295080 |
952 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
CA374295110 rs1587990467 |
955 | Y>C | No |
ClinGen Ensembl |
|
|
rs1157883800 CA374295108 |
955 | Y>D | No |
ClinGen gnomAD |
|
|
rs1458609166 CA374295118 |
956 | D>H | No |
ClinGen gnomAD |
|
|
CA374295133 rs1587990507 |
957 | F>S | No |
ClinGen Ensembl |
|
|
CA5164870 rs559828856 |
959 | T>A | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs1405282888 CA374295155 |
959 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1405282888 CA374295154 |
959 | T>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1251683890 CA374295174 |
961 | N>S | No |
ClinGen TOPMed |
|
|
CA5164871 rs182733927 |
962 | P>A | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs774125126 CA5164872 |
963 | K>T | No |
ClinGen ExAC gnomAD |
|
|
CA5164873 rs759303126 |
966 | G>R | No |
ClinGen ExAC gnomAD |
|
|
rs767096568 CA5164874 |
967 | Q>R | No |
ClinGen ExAC gnomAD |
|
|
rs752172644 CA5164875 |
968 | R>G | No |
ClinGen ExAC gnomAD |
|
|
rs1482549596 CA374295286 |
970 | Q>E | No |
ClinGen TOPMed |
|
|
CA5164876 rs145975657 |
970 | Q>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA5164877 rs763931950 |
972 | L>S | No |
ClinGen ExAC gnomAD |
|
|
CA5164878 rs753870672 |
973 | Q>K | No |
ClinGen ExAC gnomAD |
|
|
rs372349786 CA5164879 |
974 | E>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374295410 rs1409291224 |
976 | K>R | No |
ClinGen TOPMed gnomAD |
|
|
rs765052047 CA5164880 |
977 | E>D | No |
ClinGen ExAC gnomAD |
|
|
rs1240723215 CA374295456 |
981 | R>G | No |
ClinGen TOPMed |
|
|
CA374295464 rs1370971913 |
981 | R>I | No |
ClinGen TOPMed gnomAD |
|
|
CA5164882 rs755211724 |
984 | N>D | No |
ClinGen ExAC gnomAD |
|
|
rs781272229 CA5164883 |
984 | N>S | No |
ClinGen ExAC gnomAD |
|
|
CA374295520 rs1311724244 |
985 | M>V | No |
ClinGen TOPMed |
|
|
CA5164884 rs748183229 |
988 | M>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs748183229 CA374295596 |
988 | M>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756285638 CA5164885 |
989 | N>S | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 997 | R>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs749859821 CA5164887 |
997 | R>Q | No |
ClinGen ExAC gnomAD |
|
|
CA5164910 rs746227793 |
999 | N>H | No |
ClinGen ExAC gnomAD |
|
|
CA5164911 rs201268937 |
999 | N>S | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA374270752 rs1430479168 |
1002 | M>K | No |
ClinGen gnomAD |
|
|
rs1293559509 CA374270776 |
1005 | K>R | No |
ClinGen TOPMed |
|
|
rs1564115938 CA374270784 |
1006 | R>K | No |
ClinGen Ensembl |
|
|
CA5164913 rs746710682 |
1007 | I>T | No |
ClinGen ExAC gnomAD |
|
|
rs4562395 CA197281056 VAR_047489 |
1009 | E>K | No |
ClinGen UniProt Ensembl dbSNP |
|
|
CA5164915 rs776226533 |
1013 | S>C | No |
ClinGen ExAC gnomAD |
|
|
CA374270839 rs1324659078 |
1014 | K>R | No |
ClinGen gnomAD |
|
|
rs765162261 CA5164917 |
1017 | T>K | No |
ClinGen ExAC gnomAD |
|
|
rs1461046825 CA374270862 |
1018 | T>A | No |
ClinGen TOPMed |
|
|
CA5164918 rs773202830 |
1019 | I>V | No |
ClinGen ExAC gnomAD |
|
|
rs368448171 CA5164919 |
1024 | Q>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374270969 rs1353856808 |
1033 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA374270992 rs1446180317 |
1036 | K>Q | No |
ClinGen gnomAD |
|
|
CA374272178 rs1564118965 |
1038 | N>S | No |
ClinGen Ensembl |
|
|
CA5164940 rs762988408 |
1039 | K>R | No |
ClinGen ExAC gnomAD |
|
|
rs762988408 CA5164939 |
1039 | K>T | No |
ClinGen ExAC gnomAD |
|
|
rs371859745 CA5164944 |
1040 | D>E | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5164942 rs760754268 |
1040 | D>V | No |
ClinGen ExAC gnomAD |
|
|
rs774227464 CA5164941 |
1040 | D>Y | No |
ClinGen ExAC gnomAD |
|
|
rs761959232 CA5164945 |
1044 | I>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
| TCGA novel | 1046 | S>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs200488464 CA5164946 |
1047 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs200488464 CA197282873 |
1047 | T>S | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 1048 | L>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5164948 rs758965994 |
1050 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs113443856 CA197282887 |
1051 | G>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5164949 rs113443856 |
1051 | G>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374272379 rs1334176020 |
1053 | N>D | No |
ClinGen gnomAD |
|
|
CA374272386 rs369017202 |
1053 | N>I | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs369017202 CA5164951 |
1053 | N>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA374272406 rs1226145038 |
1055 | M>V | No |
ClinGen TOPMed gnomAD |
|
|
rs780811901 CA5164952 |
1056 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs1329580502 CA374272430 |
1057 | A>P | No |
ClinGen gnomAD |
|
|
CA5164953 rs202147412 |
1057 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA197282927 rs373478734 |
1058 | P>L | No |
ClinGen ESP TOPMed |
|
|
CA374272448 rs372796365 |
1058 | P>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs372796365 CA5164955 |
1058 | P>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs749136526 CA5164956 |
1059 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1482215562 CA374272476 |
1060 | E>D | No |
ClinGen gnomAD |
|
|
rs1588004994 CA374272531 |
1063 | T>A | No |
ClinGen Ensembl |
|
|
rs1328637005 CA374272550 |
1064 | V>I | No |
ClinGen TOPMed |
|
|
CA5164960 rs772039298 |
1066 | D>G | No |
ClinGen ExAC gnomAD |
|
|
CA5164959 rs759373262 |
1066 | D>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374272681 rs1422291747 |
1069 | E>K | No |
ClinGen TOPMed |
|
|
CA5164961 RCV000959077 rs61741732 |
1071 | K>R | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs7872034 CA374272852 |
1074 | L>F | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 1075 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374272895 rs1407668934 |
1076 | N>S | No |
ClinGen TOPMed gnomAD |
|
|
rs1407668934 CA374272883 |
1076 | N>T | No |
ClinGen TOPMed gnomAD |
|
|
CA374272945 rs1360242066 |
1077 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
rs913714487 CA197282971 |
1079 | K>Q | No |
ClinGen Ensembl |
|
|
CA197282977 rs982032741 |
1079 | K>T | No |
ClinGen TOPMed gnomAD |
|
|
rs1350957522 CA374273086 |
1081 | N>K | No |
ClinGen gnomAD |
|
|
rs1385998041 CA374273091 |
1082 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
rs1385998041 CA374273092 |
1082 | L>V | No |
ClinGen TOPMed gnomAD |
|
|
rs749774203 CA5164963 |
1083 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA374273320 rs1233835477 |
1090 | R>K | No |
ClinGen gnomAD |
|
|
CA5165008 rs758419284 |
1091 | S>T | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1229617285 CA374274080 |
1094 | A>D | No |
ClinGen gnomAD |
|
|
CA374274085 rs1229617285 |
1094 | A>V | No |
ClinGen gnomAD |
|
|
rs1207414603 CA374274259 |
1101 | M>I | No |
ClinGen gnomAD |
|
|
rs1238661949 CA374274399 |
1108 | P>S | No |
ClinGen gnomAD |
|
|
CA5165010 rs142619238 |
1109 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA5165011 rs768627525 |
1110 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs1263718445 CA374274465 |
1111 | I>M | No |
ClinGen TOPMed |
|
|
rs749514735 CA5165013 |
1119 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs774318098 CA5165015 |
1121 | L>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1045337612 CA197285944 |
1122 | S>F | No |
ClinGen TOPMed |
|
|
rs1424391981 CA374274660 |
1123 | H>N | No |
ClinGen gnomAD |
|
|
CA374274678 rs1412619292 |
1123 | H>R | No |
ClinGen gnomAD |
|
| TCGA novel | 1127 | I>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1127 | I>V | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374274864 rs1306376922 |
1130 | M>I | No |
ClinGen gnomAD |
|
|
rs1588015865 CA374274836 |
1130 | M>L | No |
ClinGen Ensembl |
|
|
rs201237445 COSM1226817 COSM1226816 CA197285948 |
1132 | R>C | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
COSM3788128 rs772576514 CA5165017 COSM3788129 |
1132 | R>H | pancreas [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
| TCGA novel | 1134 | H>R | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 1138 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA374275263 rs564888728 |
1141 | I>F | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA374275259 rs564888728 |
1141 | I>L | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA5165032 rs564888728 |
1141 | I>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs113637923 CA197286735 |
1144 | S>P | No |
ClinGen Ensembl |
|
|
CA197286744 rs376246589 |
1147 | E>* | No |
ClinGen ESP |
|
|
CA374275365 rs1186785479 |
1147 | E>G | No |
ClinGen gnomAD |
|
|
rs771073402 CA5165035 |
1151 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1451125764 CA374275441 |
1151 | N>Y | No |
ClinGen TOPMed |
|
|
CA374275456 rs1405045429 |
1152 | N>D | No |
ClinGen TOPMed |
|
|
CA5165036 rs778988810 |
1155 | V>I | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1588018424 CA374275656 |
1162 | V>E | No |
ClinGen Ensembl |
|
|
CA374275767 rs1444433876 |
1167 | T>I | No |
ClinGen gnomAD |
|
|
CA5165038 rs772199439 |
1168 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs371103736 CA5165040 |
1169 | A>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs769012805 CA5165041 |
1172 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA374275883 rs1366719618 |
1173 | Q>* | No |
ClinGen gnomAD |
|
|
rs761457668 CA5165043 |
1175 | Q>E | No |
ClinGen ExAC gnomAD |
|
|
CA5165044 rs764792231 |
1175 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs150649651 CA197286844 |
1177 | G>R | No |
ClinGen ESP TOPMed gnomAD |
|
| TCGA novel | 1178 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA5165047 rs766026185 |
1179 | I>M | No |
ClinGen ExAC gnomAD |
|
|
rs762527682 CA5165046 |
1179 | I>N | No |
ClinGen ExAC |
|
|
CA374276072 rs1485593792 |
1180 | S>* | No |
ClinGen TOPMed |
|
|
rs540282391 CA197286937 |
1182 | E>K | No |
ClinGen Ensembl |
|
|
CA374276162 rs1206718212 |
1185 | S>Y | No |
ClinGen gnomAD |
|
|
rs752440345 CA5165051 |
1188 | K>E | No |
ClinGen ExAC gnomAD |
|
|
CA5165052 rs756007314 |
1190 | P>H | No |
ClinGen ExAC gnomAD |
|
|
CA374276239 rs756007314 |
1190 | P>L | No |
ClinGen ExAC gnomAD |
|
|
rs1366951646 CA374276241 |
1191 | K>Q | No |
ClinGen gnomAD |
|
|
rs778992416 CA5165053 |
1192 | G>A | No |
ClinGen ExAC gnomAD |
|
|
CA374276284 rs990552269 |
1194 | H>P | No |
ClinGen TOPMed |
|
|
rs990552269 CA197286984 |
1194 | H>R | No |
ClinGen TOPMed |
|
|
CA374276314 rs1314770342 |
1196 | E>Q | No |
ClinGen TOPMed |
No associated diseases with O95347
4 regional properties for O95347
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | RecF/RecN/SMC, N-terminal | 2 - 671 | IPR003395-1 |
| domain | RecF/RecN/SMC, N-terminal | 862 - 1163 | IPR003395-2 |
| domain | SMCs flexible hinge | 520 - 640 | IPR010935 |
| domain | Smc2, ATP-binding cassette domain | 1 - 172 | IPR027120 |
Functions
11 GO annotations of cellular component
| Name | Definition |
|---|---|
| chromatin | The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome. |
| condensed chromosome | A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure. |
| condensed nuclear chromosome | A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct nuclear chromosome. |
| condensin complex | A multisubunit protein complex that plays a central role in chromosome condensation in meiosis and mitosis. |
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| extracellular exosome | A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. |
| nuclear chromosome | A chromosome that encodes the nuclear genome and is found in the nucleus of a eukaryotic cell during the cell cycle phases when the nucleus is intact. |
| nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. |
| nucleoplasm | That part of the nuclear content other than the chromosomes or the nucleolus. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
4 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
| chromatin binding | Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. |
| single-stranded DNA binding | Binding to single-stranded DNA. |
8 GO annotations of biological process
| Name | Definition |
|---|---|
| cell division | The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. |
| kinetochore organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules. |
| meiotic chromosome condensation | Compaction of chromatin structure prior to meiosis in eukaryotic cells. |
| meiotic chromosome segregation | The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle. |
| mitotic chromosome condensation | The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells. |
| positive regulation of chromosome condensation | Any process that activates or increases the frequency, rate or extent of chromosome condensation. |
| positive regulation of chromosome segregation | Any process that activates or increases the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets. |
| positive regulation of chromosome separation | Any process that activates or increases the frequency, rate or extent of chromosome separation. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MHIKSIILEG | FKSYAQRTEV | NGFDPLFNAI | TGLNGSGKSN | ILDSICFLLG | ISNLSQVRAS |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NLQDLVYKNG | QAGITKASVS | ITFDNSDKKQ | SPLGFEVHDE | ITVTRQVVIG | GRNKYLINGV |
| 130 | 140 | 150 | 160 | 170 | 180 |
| NANNTRVQDL | FCSVGLNVNN | PHFLIMQGRI | TKVLNMKPPE | ILSMIEEAAG | TRMYEYKKIA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| AQKTIEKKEA | KLKEIKTILE | EEITPTIQKL | KEERSSYLEY | QKVMREIEHL | SRLYIAYQFL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| LAEDTKVRSA | EELKEMQDKV | IKLQEELSEN | DKKIKALNHE | IEELEKRKDK | ETGGILRSLE |
| 310 | 320 | 330 | 340 | 350 | 360 |
| DALAEAQRVN | TKSQSAFDLK | KKNLACEESK | RKELEKNMVE | DSKTLAAKEK | EVKKITDGLH |
| 370 | 380 | 390 | 400 | 410 | 420 |
| ALQEASNKDA | EALAAAQQHF | NAVSAGLSSN | EDGAEATLAG | QMMACKNDIS | KAQTEAKQAQ |
| 430 | 440 | 450 | 460 | 470 | 480 |
| MKLKHAQQEL | KNKQAEVKKM | DSGYRKDQEA | LEAVKRLKEK | LEAEMKKLNY | EENKEESLLE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| KRRQLSRDIG | RLKETYEALL | ARFPNLRFAY | KDPEKNWNRN | CVKGLVASLI | SVKDTSATTA |
| 550 | 560 | 570 | 580 | 590 | 600 |
| LELVAGERLY | NVVVDTEVTG | KKLLERGELK | RRYTIIPLNK | ISARCIAPET | LRVAQNLVGP |
| 610 | 620 | 630 | 640 | 650 | 660 |
| DNVHVALSLV | EYKPELQKAM | EFVFGTTFVC | DNMDNAKKVA | FDKRIMTRTV | TLGGDVFDPH |
| 670 | 680 | 690 | 700 | 710 | 720 |
| GTLSGGARSQ | AASILTKFQE | LKDVQDELRI | KENELRALEE | ELAGLKNTAE | KYRQLKQQWE |
| 730 | 740 | 750 | 760 | 770 | 780 |
| MKTEEADLLQ | TKLQQSSYHK | QQEELDALKK | TIEESEETLK | NTKEIQRKAE | EKYEVLENKM |
| 790 | 800 | 810 | 820 | 830 | 840 |
| KNAEAERERE | LKDAQKKLDC | AKTKADASSK | KMKEKQQEVE | AITLELEELK | REHTSYKQQL |
| 850 | 860 | 870 | 880 | 890 | 900 |
| EAVNEAIKSY | ESQIEVMAAE | VAKNKESVNK | AQEEVTKQKE | VITAQDTVIK | AKYAEVAKHK |
| 910 | 920 | 930 | 940 | 950 | 960 |
| EQNNDSQLKI | KELDHNISKH | KREAEDGAAK | VSKMLKDYDW | INAERHLFGQ | PNSAYDFKTN |
| 970 | 980 | 990 | 1000 | 1010 | 1020 |
| NPKEAGQRLQ | KLQEMKEKLG | RNVNMRAMNV | LTEAEERYND | LMKKKRIVEN | DKSKILTTIE |
| 1030 | 1040 | 1050 | 1060 | 1070 | 1080 |
| DLDQKKNQAL | NIAWQKVNKD | FGSIFSTLLP | GANAMLAPPE | GQTVLDGLEF | KVALGNTWKE |
| 1090 | 1100 | 1110 | 1120 | 1130 | 1140 |
| NLTELSGGQR | SLVALSLILS | MLLFKPAPIY | ILDEVDAALD | LSHTQNIGQM | LRTHFTHSQF |
| 1150 | 1160 | 1170 | 1180 | 1190 | |
| IVVSLKEGMF | NNANVLFKTK | FVDGVSTVAR | FTQCQNGKIS | KEAKSKAKPP | KGAHVEV |