O94241
Gene name |
arp6 (SPCC550.12) |
Protein name |
Actin-like protein arp6 |
Names |
|
Species |
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) |
KEGG Pathway |
spo:SPCC550.12 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for O94241
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-O94241-F1 | Predicted | AlphaFoldDB |
No variants for O94241
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for O94241 | |||||
No associated diseases with O94241
1 regional properties for O94241
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Aminoacyl-tRNA synthetase, class II | 13 - 319 | IPR006195 |
3 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| Swr1 complex | A multisubunit protein complex that is involved in chromatin remodeling. It is required for the incorporation of the histone variant H2AZ into chromatin. In S. cerevisiae, the complex contains Swr1p, a Swi2/Snf2-related ATPase, and 12 additional subunits. |
1 GO annotations of molecular function
| Name | Definition |
|---|---|
| nucleosome binding | Binding to a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| chromatin remodeling | A dynamic process of chromatin reorganization resulting in changes to chromatin structure. These changes allow DNA metabolic processes such as transcriptional regulation, DNA recombination, DNA repair, and DNA replication. |
| histone exchange | The replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits. |
| nucleosome organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of one or more nucleosomes. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGLPPKTIVL | DNGAYHIKAG | FAGGKVVEIP | NCLTRSKDGN | RLFLGNELAN | CNDFTTLQFR |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RAHEKGYLVH | WSTETAVWDL | VMRNVGVMEP | SMADYSLLLT | QPVFTMPSIE | HNTIQLVFEE |
| 130 | 140 | 150 | 160 | 170 | 180 |
| FQFDAYLPCT | PAELIPWDHG | SFTMNQEDAY | TGQHGECVLV | IDSGYSFTHI | IPVIDFSVQE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QAVKRVDVGG | KLLTNYLKEV | ISYRKYNMME | ETYIVNEIKE | SVCYVSQNFK | EDMEICHEKP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| RSKLEICYAL | PDYSTGKHGY | IVRDINQKIE | QQVLNLSNER | FMIPELLFSP | SDIEIREAGI |
| 310 | 320 | 330 | 340 | 350 | 360 |
| PEAVMQSVTH | FPENIQAMLL | ENVVTIGGNC | KFPGFHKRLS | SELRSLAPAN | WEVKVFEPSD |
| 370 | 380 | 390 | 400 | ||
| PICFPWKKAS | HMPLEHWNAN | KITRSEYSEH | GANIMTRKRR | I |