O84641
Gene name |
greA (CT_636) |
Protein name |
Transcription elongation factor GreA |
Names |
Transcript cleavage factor GreA |
Species |
Chlamydia trachomatis (strain D/UW-3/Cx) |
KEGG Pathway |
ctr:CT_636 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for O84641
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-O84641-F1 | Predicted | AlphaFoldDB |
No variants for O84641
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for O84641 | |||||
No associated diseases with O84641
4 regional properties for O84641
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Transcription elongation factor, GreA/GreB, C-terminal | 644 - 714 | IPR001437 |
| conserved_site | Transcription elongation factor, GreA/GreB, conserved site | 578 - 609 | IPR018151-1 |
| conserved_site | Transcription elongation factor, GreA/GreB, conserved site | 680 - 696 | IPR018151-2 |
| domain | Transcription elongation factor, GreA/GreB, N-terminal | 566 - 635 | IPR022691 |
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
| RNA polymerase binding | Binding to an RNA polymerase molecule or complex. |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| DNA-templated transcription elongation | The extension of an RNA molecule after transcription initiation and promoter clearance at a DNA-dependent RNA polymerase promoter by the addition of ribonucleotides catalyzed by an RNA polymerase. |
| regulation of DNA-templated transcription elongation | Any process that modulates the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MDYLEKLQSL | MENHPSDFFS | LWEEYCFNDV | VKGDELVVLL | EKIKGSTIAP | AFGKIAESVI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PLWEQLPEGE | EKDKVLSLVF | DVQTTNSKNL | LEIALQQVKK | YEDSANYKEA | LRIVGLRDGI |
| 130 | 140 | 150 | 160 | 170 | 180 |
| TFSHCLGRFA | LLMHLSEGNF | VFHQGGWGVG | EIMGVSFLQQ | KVLVEFEGVL | TAKDISFETA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| FRMLVPLRKD | HFLARRFGDP | DAFEAFARKE | PVAAIECLLK | DLGPKNAKEI | RNELVELVIP |
| 250 | 260 | 270 | 280 | 290 | 300 |
| EEDWSRWWQS | AKIKMKKDAR | ILAPASSKDP | YVFDPKGFSF | VSQLQASLSG | SNDANKKITS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| CYAFVRDLGS | ELKDESNRQL | VIKELKALDL | PADSALLIQR | AMLLSEFLGE | KAPELECENI |
| 370 | 380 | 390 | 400 | 410 | 420 |
| AKLSEDQLFD | IVNNIEILSL | QKSFLALIHS | CSPVWVPVYT | KLFLTTSTSM | LREQVFKVLN |
| 430 | 440 | 450 | 460 | 470 | 480 |
| ADKEARENIL | KKVFAMIEQP | LLCPELFVWL | FARVVDGEDG | LFAESDKKEI | ERQMLASALE |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LMHKVATTSQ | KDLGKKLYSF | LVGQRFLVVR | QIIDQASIEY | LKEFVLLSSK | CPQFTQGDLG |
| 550 | 560 | 570 | 580 | 590 | 600 |
| VLRSLAEVVQ | PALKRGTPEE | EENILWTTSD | SFTRMKNKLQ | SLVGKEMVEN | AKEIEDARAL |
| 610 | 620 | 630 | 640 | 650 | 660 |
| GDLRENSEYK | IALERRARLQ | EEIHVLSEEI | NRAKILTKDA | VFTDSVGVGC | KVVLESDQGD |
| 670 | 680 | 690 | 700 | 710 | |
| KVCYTILGPW | DANPDEKILS | LKSKLAQEMV | GKAVGETVLF | QGKKHKIKEI | SSIWD |