O80796
Gene name |
VIPP1 (At1g65260, T8F5.2) |
Protein name |
Membrane-associated protein VIPP1, chloroplastic |
Names |
Protein VESICLE-INDUCING PROTEIN IN PLASTIDS 1 |
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT1G65260 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for O80796
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-O80796-F1 | Predicted | AlphaFoldDB |
31 variants for O80796
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_1_24236344_T_A | 6 | S>T | No | 1000Genomes | |
| ENSVATH05066809 | 9 | T>A | No | 1000Genomes | |
| ENSVATH00122961 | 17 | P>L | No | 1000Genomes | |
| ENSVATH01468815 | 17 | P>S | No | 1000Genomes | |
| tmp_1_24236387_C_G | 20 | S>C | No | 1000Genomes | |
| ENSVATH05066811 | 23 | P>L | No | 1000Genomes | |
| ENSVATH05066812 | 31 | C>Y | No | 1000Genomes | |
| ENSVATH05066813 | 35 | I>V | No | 1000Genomes | |
| tmp_1_24236440_C_G | 38 | L>V | No | 1000Genomes | |
| ENSVATH01468818 | 40 | T>P | No | 1000Genomes | |
| tmp_1_24236846_C_T | 49 | A>V | No | 1000Genomes | |
| ENSVATH13730475 | 50 | L>P | No | 1000Genomes | |
| tmp_1_24236855_T_C | 52 | V>A | No | 1000Genomes | |
| ENSVATH05066827 | 53 | N>K | No | 1000Genomes | |
| ENSVATH05066829 | 64 | R>S | No | 1000Genomes | |
| ENSVATH05066830 | 66 | N>K | No | 1000Genomes | |
| ENSVATH00122968 | 135 | A>S | No | 1000Genomes | |
| ENSVATH14416669 | 157 | L>P | No | 1000Genomes | |
| ENSVATH00122988 | 173 | T>N | No | 1000Genomes | |
| ENSVATH00122988 | 173 | T>S | No | 1000Genomes | |
| ENSVATH00122995 | 198 | S>G | No | 1000Genomes | |
| tmp_1_24239015_G_C | 233 | S>T | No | 1000Genomes | |
| ENSVATH05066881 | 238 | A>V | No | 1000Genomes | |
| tmp_1_24239658_C_A | 257 | T>N | No | 1000Genomes | |
| ENSVATH00123018 | 259 | I>M | No | 1000Genomes | |
| ENSVATH05066898 | 270 | M>L | No | 1000Genomes | |
| tmp_1_24240342_G_A | 303 | V>I | No | 1000Genomes | |
| ENSVATH14416779 | 307 | T>M | No | 1000Genomes | |
| ENSVATH14416778 | 307 | T>S | No | 1000Genomes | |
| ENSVATH00123029 | 327 | A>T | No | 1000Genomes | |
| ENSVATH05066910 | 330 | F>C | No | 1000Genomes |
No associated diseases with O80796
No regional properties for O80796
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| No domain, repeats, and functional sites for O80796 | |||
Functions
8 GO annotations of cellular component
| Name | Definition |
|---|---|
| chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
| chloroplast envelope | The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space. |
| chloroplast inner membrane | The inner, i.e. lumen-facing, lipid bilayer of the chloroplast envelope; also faces the chloroplast stroma. |
| chloroplast nucleoid | The region of a chloroplast to which the DNA is confined. |
| chloroplast stroma | The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis. |
| chloroplast thylakoid | Sac-like membranous structures (cisternae) in a chloroplast combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. An example of this component is found in Arabidopsis thaliana. |
| chloroplast thylakoid membrane | The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana. |
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| thylakoid membrane organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the thylakoid membrane. |
| vesicle organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vesicle. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MALKASPVTG | LFPPLRPTAS | SSPSTSSNRP | CSLRILPLRT | SFFGNSSGAL | RVNVLRLACD |
| 70 | 80 | 90 | 100 | 110 | 120 |
| NRLRCNGHGA | TMNLFERFSR | VVKSYANALI | SSFEDPEKIL | EQTVIEMNSD | LTKMRQATAQ |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VLASQKQLQN | KYKAAQQSSD | DWYKRAQLAL | AKGDEDLARE | ALKRRKSFAD | NATALKTQLD |
| 190 | 200 | 210 | 220 | 230 | 240 |
| QQKGVVDNLV | SNTRLLESKI | QEAKAKKDTL | LARARTAKTA | TKVQEMIGTV | NTSGALSAFE |
| 250 | 260 | 270 | 280 | 290 | 300 |
| KMEEKVMAME | SEADALTQIG | TDELEGKFQM | LETSSVDDDL | ADLKKELSGS | SKKGELPPGR |
| 310 | 320 | ||||
| STVAASTRYP | FKDSEIENEL | NELRRKANDF |