O56044

PR
Gene name
Protein name
Major inner capsid protein VP3
Names
Major core capsid protein VP3
Species
Rice ragged stunt virus (isolate Thailand) (RRSV)
KEGG Pathway
vg:991197
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-77 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

0 structures for O56044

Entry ID Method Resolution Chain Position Source

No variants for O56044

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for O56044

No associated diseases with O56044

No regional properties for O56044

Type Name Position InterPro Accession
No domain, repeats, and functional sites for O56044

Functions

Description
EC Number
Subcellular Localization
  • Virion
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
T=2 icosahedral viral capsid The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=2 symmetry. The T=2 capsid is composed of 12 pentameric dimers.
viral inner capsid The inner layer of a double or triple concentric icosahedral capsid. Inner capsids are part of reoviridae and cystoviridae virions.

No GO annotations of molecular function

Name Definition
No GO annotations for molecular function

No GO annotations of biological process

Name Definition
No GO annotations for biological process

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSNLPKPASH FEPEKNVDDK GNVTGSAPPV SKDTPTQQAS VSLPNQEEPT QQTLVTTELP
70 80 90 100 110 120
TKPDYNDLLL KASDERLLLV KEAKPQTLRF YASPTGLTAS GFSIVTSPTS SYEQHAIDIF
130 140 150 160 170 180
PYNCPVDKIV PAFTLEQIKI TNDVLSSAQQ SYLSRIPHDT SLVKLNEIEV VTGGSRDLFS
190 200 210 220 230 240
LGTGYVMVVP NAEFFEGANL KFVYGVPMAD IIFSKLTSQS AADYAFLDRS RIASGFIMFA
250 260 270 280 290 300
LHFALRTNVN LVVTKDNSAR FASELSYSRP MSFVQGKKIV LPVQPHVCFA EGNSLMRYLD
310 320 330 340 350 360
TALEGKYTQG VTYKYGRERI ITETKEGGPI TEITYLNIDN VTAQALGITA HVIGIDRYRE
370 380 390 400 410 420
DNVKRALLAY SLSGSTVDLM QSDESERMFG RMLSPQQELS YLLVGAALSQ DVYKTILRAN
430 440 450 460 470 480
LDAFMMFGTV MPSLSDSLAK IPADAGNQQI ISLIRERQSV SGFENAMEYL AMQVTPPLIW
490 500 510 520 530 540
PCVISREVNV TGLSLLIMLL EYILFFIFYP SLAKKCGAGL CNNFYKLVFA LSNSEWSQFV
550 560 570 580 590 600
TRVGYDGTLG NSIPITDEDY WSNARRPALF TTDLSQFRLL GLIQRLIAPI GEHREHVKAQ
610 620 630 640 650 660
AAEFPRLKAR TEYWNPYPNP GAQHVEQTIF KARLLQAFDE TLTLVKDLNQ TGQLVSKTLM
670 680 690 700 710 720
AGVAKVFNTC KIKLRYHGVG FGRDIGMPLA YLRDRKINFY HDYDGRLDTP FPNQMMLVSA
730 740 750 760 770 780
SQSPHDHKIP IELRRKGQIV LETGVVWTLV LGLQFPSHQF DEDMTNDPIC KFRAPSPGEE
790 800 810 820 830 840
LGKDDTIIAM CANACVPFSI AAGIISESYA DGGMKEIKEL LSGSLSSTEF RNLISCIQTA
850 860 870 880 890 900
MQGSGFNVGR NRDVFRQNET VDLRFIEPKV RYVENELTII APTPQDPPII RGDLQLIPEG
910 920 930 940 950 960
LMPRFRLGLT AIADSSSEYS RLRKGLYLAR CEVDVEAPNN ALPLDLRDYV EVEYSHDLFQ
970 980 990 1000 1010 1020
VRRIQTKQAL GIFYQGEFYY RPALVPKMLI VVNTSEEMEP SYQEFFMQCL EERRIVIKLP
1030 1040 1050 1060 1070 1080
KMYFLSRIVC THSIQRPDER DAVLGLLAVR NDQIPLVTFY DTEQVDPTIQ FDGLASGSKS
1090 1100 1110 1120 1130 1140
KFIWPISSID QNVVVRALGA SGSTAPIGFA APTDSMCDSG SIDDVGNLTT GAGVLKDPRV
1150 1160 1170
ISLTNGVINY TERANLTGRV LYRYRPAYAL DSY