O49508
Gene name |
At4g18380 (F28J12.40) |
Protein name |
F-box protein At4g18380 |
Names |
|
Species |
Arabidopsis thaliana (Mouse-ear cress) |
KEGG Pathway |
ath:AT4G18380 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for O49508
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-O49508-F1 | Predicted | AlphaFoldDB |
46 variants for O49508
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| tmp_4_10157969_C_G | 5 | L>V | No | 1000Genomes | |
| ENSVATH06714709 | 6 | R>H | No | 1000Genomes | |
| tmp_4_10157983_T_A | 9 | D>E | No | 1000Genomes | |
| ENSVATH06714710 | 10 | P>T | No | 1000Genomes | |
| ENSVATH02873635 | 11 | L>V | No | 1000Genomes | |
| ENSVATH02873637 | 16 | H>Y | No | 1000Genomes | |
| tmp_4_10158019_A_T | 21 | E>D | No | 1000Genomes | |
| ENSVATH00519713 | 27 | N>H | No | 1000Genomes | |
| ENSVATH06714712 | 39 | N>Y | No | 1000Genomes | |
| ENSVATH11973858 | 61 | P>T | No | 1000Genomes | |
| ENSVATH06714714 | 70 | V>I | No | 1000Genomes | |
| ENSVATH14246351 | 77 | D>E | No | 1000Genomes | |
| tmp_4_10158194_T_C | 80 | S>P | No | 1000Genomes | |
| tmp_4_10158224_G_T | 90 | A>S | No | 1000Genomes | |
| ENSVATH02873641 | 90 | A>V | No | 1000Genomes | |
| ENSVATH06714715 | 92 | A>V | No | 1000Genomes | |
| ENSVATH11973859 | 105 | K>R | No | 1000Genomes | |
| ENSVATH06714717 | 118 | G>D | No | 1000Genomes | |
| ENSVATH06714718 | 122 | L>V | No | 1000Genomes | |
| tmp_4_10158338_C_T | 128 | P>S | No | 1000Genomes | |
| tmp_4_10158344_T_C | 130 | S>P | No | 1000Genomes | |
| tmp_4_10158427_C_A | 157 | N>K | No | 1000Genomes | |
| tmp_4_10158436_G_T | 160 | E>D | No | 1000Genomes | |
| ENSVATH06714720 | 165 | K>E | No | 1000Genomes | |
| tmp_4_10158455_G_A | 167 | E>K | No | 1000Genomes | |
| tmp_4_10158473_T_G | 173 | L>V | No | 1000Genomes | |
| ENSVATH06714721 | 186 | E>D | No | 1000Genomes | |
| tmp_4_10158560_G_A | 202 | V>M | No | 1000Genomes | |
| ENSVATH06714722 | 204 | P>L | No | 1000Genomes | |
| ENSVATH02873644 | 207 | N>I | No | 1000Genomes | |
| ENSVATH11973862 | 223 | D>E | No | 1000Genomes | |
| ENSVATH06714723 | 224 | N>Y | No | 1000Genomes | |
| tmp_4_10158630_G_A | 225 | G>E | No | 1000Genomes | |
| ENSVATH14246354 | 283 | C>W | No | 1000Genomes | |
| tmp_4_10158806_A_T | 284 | M>L | No | 1000Genomes | |
| tmp_4_10158836_G_A | 294 | V>M | No | 1000Genomes | |
| tmp_4_10158915_C_A | 320 | S>Y | No | 1000Genomes | |
| tmp_4_10158925_G_C | 323 | L>F | No | 1000Genomes | |
| ENSVATH02873654 | 343 | K>R | No | 1000Genomes | |
| ENSVATH06714725 | 345 | E>D | No | 1000Genomes | |
| ENSVATH11973864 | 351 | W>C | No | 1000Genomes | |
| tmp_4_10159014_C_G | 353 | S>C | No | 1000Genomes | |
| ENSVATH06714726 | 355 | A>S | No | 1000Genomes | |
| tmp_4_10159026_A_T | 357 | D>V | No | 1000Genomes | |
| tmp_4_10159040_G_T | 362 | V>L | No | 1000Genomes | |
| tmp_4_10159077_G_C | 374 | C>S | No | 1000Genomes |
No associated diseases with O49508
1 regional properties for O49508
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | F-box domain | 22 - 70 | IPR001810 |
No GO annotations of cellular component
| Name | Definition |
|---|---|
| No GO annotations for cellular component |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
No GO annotations of biological process
| Name | Definition |
|---|---|
| No GO annotations for biological process |
1 homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| Q9FNK5 | At5g46170 | F-box protein At5g46170 | Arabidopsis thaliana (Mouse-ear cress) | PR |
| 10 | 20 | 30 | 40 | 50 | 60 |
| MAIILRSSDP | LLSRIHPEPQ | EIDHFDNLPD | SILLLIFNNI | GDVKALGRCS | VVSKRFHSLI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| PQVENVFVRV | DCVISDDDSS | SLLSDKPRSA | SAASPFSAIF | RLVFKPLQAL | GQFLKRSGSS |
| 130 | 140 | 150 | 160 | 170 | 180 |
| SLPSGSSPSS | LLISGGDDGE | IEQGGVTHHS | PTQVLKNFDE | IKFLKIELPS | GELGIDDGVL |
| 190 | 200 | 210 | 220 | 230 | 240 |
| LKWRAEFGST | LENCVILGAS | SVIPPTNSDK | TEASSAPVAA | VEDNGSIPES | FYTNGGLKLR |
| 250 | 260 | 270 | 280 | 290 | 300 |
| VVWTISSLIA | ASARHYLLQP | IIAEHKTLDS | LVLTDVDGQG | VLCMNRDQLE | ELRVKPLSAS |
| 310 | 320 | 330 | 340 | 350 | 360 |
| SASKRTLVPA | LNMRLWYAPS | LELPDGTVLK | GATLVAIRPS | ESKKEVCDVS | WVSSAFDEPY |
| 370 | |||||
| GVAAKMLVKR | RTYCLEMNSF |