Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

Autoinhibited structure

Activated structure

1 structures for O13816

Entry ID Method Resolution Chain Position Source
AF-O13816-F1 Predicted AlphaFoldDB

15 variants for O13816

Variant ID(s) Position Change Description Diseaes Association Provenance
I_2036490_A_T 30 M>L No Jeffares_SNPs
I_2037080_C_T 183 L>F No Jeffares_SNPs
I_2037320_G_A 263 V>I No Jeffares_SNPs
I_2037330_A_G 266 N>S No Jeffares_SNPs
I_2037968_A_G 462 Q>R No Jeffares_SNPs
I_2038019_G_C 479 C>S No Jeffares_SNPs
I_2038157_T_C 525 I>T No Jeffares_SNPs
I_2038223_A_T 547 D>V No Jeffares_SNPs
I_2038370_C_T 596 T>M No Jeffares_SNPs
I_2038396_G_T 605 D>Y No Jeffares_SNPs
I_2038570_T_A 663 F>I No Jeffares_SNPs
I_2038909_T_C 776 F>L No Jeffares_SNPs
I_2039184_C_A 851 D>E No Jeffares_SNPs
I_2039458_T_G 943 C>G No Jeffares_SNPs
I_2039482_C_T 951 P>S No Jeffares_SNPs

No associated diseases with O13816

3 regional properties for O13816

Type Name Position InterPro Accession
domain RNA recognition motif domain 42 - 128 IPR000504
domain Translation initiation factor, beta propellor-like domain 408 - 630 IPR013979
domain eIF3B, RNA recognition motif 41 - 124 IPR034363

Functions

Description
EC Number
Subcellular Localization
  • Nucleus
  • Chromosome, centromere
  • Associates with chromatin
  • Cohesin complex mainly associates with broad centromere region
  • Also associates with mating-type heterochromatic region
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

7 GO annotations of cellular component

Name Definition
chromatin The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
chromosome, subtelomeric region A region of the chromosome, adjacent to the telomere (on the centromeric side) that contains repetitive DNA and sometimes genes. This region is usually heterochromatin.
cohesin complex A protein complex that is required for sister chromatid cohesion in eukaryotes. The cohesin complex forms a molecular ring complex, and is composed of structural maintenance of chromosomes (SMC) and kleisin proteins. For example, in yeast, the complex is composed of the SMC proteins Smc1p and Smc3p, and the kleisin protein Scc1p. In vertebrates, the complex is composed of the SMC1 (SMC1A or SMC1B) and SMC3 heterodimer attached via their hinge domains to a kleisin (RAD21, REC8 or RAD21L) which links them, and one STAG protein (STAG1, STAG2 or STAG3).
mating-type region heterochromatin Heterochromatic regions of the chromosome found at silenced mating-type loci.
mitotic cohesin complex A cohesin complex that mediates sister chromatid cohesion during mitosis; has a subunit composition distinct from that of the meiotic cohesin complex.
nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
pericentric heterochromatin Heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by methylated H3 histone at lysine 9 (H3K9me2/H3K9me3).

2 GO annotations of molecular function

Name Definition
chromatin binding Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

5 GO annotations of biological process

Name Definition
cell division The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.
chromatin looping A chromatin organization process that starts with the loading of an extrusion motor (by an SMC family complex) onto the chromatin, followed by chromatin extrusion that stops at loop anchoring sites on the chromosome.
mitotic cohesin loading The protein localization to chromatin by which a cohesin ring complex is topologically linked to DNA as part of the mitotic cell cycle.
mitotic sister chromatid cohesion The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission.
sister chromatid cohesion The cell cycle process in which the sister chromatids of a replicated chromosome become tethered to each other.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSESVTTGSD DDGGDRESSP VMLSQSFDPM SSSSNSSSEE NSDDDYEKTI SSKKRHPRPN
70 80 90 100 110 120
SKGVNVKRSR RNAIVEEDPQ EEIFNNLFAF LLDQKVDTMD IAVSWFADYA KDNQSALANL
130 140 150 160 170 180
INFILKCCGC NRAINVFDVQ DQDSASATLS QIQLSVERTS TRDYPLNSKN LKFRNFRKRL
190 200 210 220 230 240
TGLLSNFVSQ LSIRNYLYNS TVFEDIMSWV VAMSSSTMRP IRHTATVFCL NIMTFLCEKS
250 260 270 280 290 300
KELLNEHAIA TKQLEKEEKR SRVNRNRINE LNNSLGEIVK QQDTLTTYLN DYFDSVFVHR
310 320 330 340 350 360
YRDVEPKIRV DCLQELGVWI NTVPSIFFSG SYLRYLGWML SDINTTVRLT VVKVLRKFFE
370 380 390 400 410 420
TDSFIGGLRH FSSRFKERIL EMSCVDADIG VRVASIRLCN AMRTCGFLEN SEILKVLKLI
430 440 450 460 470 480
LDINPRVQRE AVLFLCKVVD ESVNEKIDLW GEEDYILKAF SQTSLTTFSV HWIKFSQMCK
490 500 510 520 530 540
LLEEVRLSYQ SSFDYDTLLR IFQKNGNFIT PITQALLNAC EIDSIYQSWE DISNFVLFDN
550 560 570 580 590 600
YTSTLKDPID SILSFCKLND FQESILLQLL SASIQTVCNN NFITPKTVHN KQAAETTNDQ
610 620 630 640 650 660
NKDKDLLYLN LLPYINSITE RNSASPTLLH DSLRLLFSMD LTEMTDPQLS RHFELLINNL
670 680 690 700 710 720
KKFFLTNNDL QIIQGCTILF LRLDSIPALK EDLKLLVTDI CDQTVTEFLK NFGSFNIQDA
730 740 750 760 770 780
VITKDEFVIF EACLTRIEGC TSLKDFSDYP EFDIIYERLV SLLSRVPNSY EDTLKFSAIN
790 800 810 820 830 840
TLQSLLFWFF LRKDNPADEE KKKDDETKVF NCLINIMNND SSKILQLQAA RTFLETVIMK
850 860 870 880 890 900
EGVKASHYND DNRVSEEHNF LKPQFLDALL KILEGWLYTY AKVGQFPFKR LTQASSPHTQ
910 920 930 940 950 960
ISLDKNPLNR RLLEHVCCDL TSKLLIVVSL SNTITPEFSQ QFCELRGHYG PKLSAIVDEF
LN