O02056

PR
Gene name
rpl-4 (B0041.4)
Protein name
60S ribosomal protein L4
Names
Species
Caenorhabditis elegans
KEGG Pathway
cel:CELE_B0041.4
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

30-108 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for O02056

Entry ID Method Resolution Chain Position Source
AF-O02056-F1 Predicted AlphaFoldDB

No variants for O02056

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for O02056

No associated diseases with O02056

3 regional properties for O02056

Type Name Position InterPro Accession
domain Exoribonuclease, phosphorolytic domain 1 11 - 139 IPR001247
domain Exoribonuclease, phosphorolytic domain 2 160 - 225 IPR015847
conserved_site Ribonuclease PH, conserved site 116 - 128 IPR018336

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytosolic large ribosomal subunit The large subunit of a ribosome located in the cytosol.

2 GO annotations of molecular function

Name Definition
RNA binding Binding to an RNA molecule or a portion thereof.
structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.

2 GO annotations of biological process

Name Definition
determination of adult lifespan The pathways that regulate the duration of the adult phase of the life-cycle of an animal.
translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MAARPLVTVY DEKYEATQSQ IRLPAVFRTP IRPDLVSFIA DQVRRNRRQA HAVNTKAGKQ
70 80 90 100 110 120
HSAESWGTGR AVARIPRVRG GGTHRSGQGA FGNMCRGGHM FAPLKVFRRW HRNVNIAQKR
130 140 150 160 170 180
YAVSSAIAAS GIPALLQARG HVIDQVAEVP LVVSDKVESF RKTKEAVVFL RRSHLWADIE
190 200 210 220 230 240
KVYNSKRNRA GKGKLRNRQH KQKLGPVVIY GQDAECARAF RNIPGVDVMN VERLNLLKLA
250 260 270 280 290 300
PGGHLGRLII WTESAFKKLD TIYGTTVANS SQLKKGWSVP LPIMANSDFS RIIRSEEVVK
310 320 330 340
AIRAPKKNPV LPKVHRNPLK KRTLLYKLNP YASILRKASK ANVKK