O00458
Gene name |
IFRD1 |
Protein name |
Interferon-related developmental regulator 1 |
Names |
Nerve growth factor-inducible protein PC4 |
Species |
Homo sapiens (Human) |
KEGG Pathway |
hsa:3475 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for O00458
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-O00458-F1 | Predicted | AlphaFoldDB |
347 variants for O00458
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
|
rs150651401 RCV000789967 CA4443608 |
172 | I>V | Charcot-Marie-Tooth disease [ClinVar] | Yes |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
rs773505025 CA4443447 |
2 | P>A | No |
ClinGen ExAC gnomAD |
|
|
rs144427603 CA4443448 |
2 | P>L | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs144427603 CA369086811 |
2 | P>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1484684233 CA369086818 |
3 | K>N | No |
ClinGen TOPMed |
|
|
rs1185179802 CA369086814 |
3 | K>Q | No |
ClinGen TOPMed |
|
|
CA369086827 rs1218357299 |
4 | N>K | No |
ClinGen gnomAD |
|
|
rs151204901 CA369086831 |
5 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4443450 rs151204901 |
5 | K>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs1201162466 CA369086843 |
7 | R>G | No |
ClinGen gnomAD |
|
|
CA165003676 rs564629125 |
7 | R>L | No |
ClinGen 1000Genomes |
|
|
rs752143232 CA4443451 |
8 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs1185751655 CA369086865 |
10 | P>L | No |
ClinGen gnomAD |
|
|
rs1358058408 CA369086870 |
11 | H>L | No |
ClinGen TOPMed |
|
|
rs1041874615 CA165003679 |
11 | H>N | No |
ClinGen Ensembl |
|
|
CA369086875 rs1426447774 |
12 | R>G | No |
ClinGen gnomAD |
|
|
rs1288989910 CA369086876 |
12 | R>H | No |
ClinGen TOPMed |
|
|
rs1288989910 CA369086878 |
12 | R>L | No |
ClinGen TOPMed |
|
|
rs1478053739 CA369086881 |
13 | G>C | No |
ClinGen gnomAD |
|
|
rs150336380 CA4443454 |
14 | S>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs756906927 CA4443455 |
14 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369086892 rs1172743586 |
15 | S>G | No |
ClinGen gnomAD |
|
|
CA4443456 rs767342314 |
18 | G>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4443457 rs767342314 |
18 | G>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs137896794 CA4443459 |
19 | G>S | No |
ClinGen ESP ExAC gnomAD |
|
|
CA4443460 rs749340644 |
23 | A>P | No |
ClinGen ExAC gnomAD |
|
|
CA4443461 rs373600693 |
25 | A>T | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA165003680 rs913394439 |
26 | A>T | No |
ClinGen TOPMed gnomAD |
|
|
CA165003681 rs946320691 |
28 | A>S | No |
ClinGen TOPMed gnomAD |
|
|
CA4443462 rs779183830 |
28 | A>V | No |
ClinGen ExAC gnomAD |
|
|
CA369086980 rs1345844951 |
30 | T>I | No |
ClinGen TOPMed gnomAD |
|
|
CA4443465 rs773558311 |
31 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1294931545 CA369086983 |
31 | A>V | No |
ClinGen TOPMed gnomAD |
|
|
rs947683122 CA165003682 |
32 | G>C | No |
ClinGen TOPMed gnomAD |
|
|
rs748306600 CA165004302 |
32 | G>D | No |
ClinGen Ensembl |
|
|
CA369087007 rs1323404436 |
33 | G>D | No |
ClinGen TOPMed gnomAD |
|
| TCGA novel | 33 | G>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1245332506 CA369087027 |
36 | R>* | No |
ClinGen gnomAD |
|
|
rs145138662 CA165004304 |
37 | N>D | No |
ClinGen ESP gnomAD |
|
| VAR_064723 | 39 | Q>K | found in a renal cell carcinoma sample; somatic mutation [UniProt] | No | UniProt |
|
rs1563265823 CA369087056 |
40 | P>R | No |
ClinGen Ensembl |
|
|
CA165004306 rs927418711 |
41 | F>S | No |
ClinGen TOPMed |
|
|
CA369087060 rs1449402013 |
41 | F>V | No |
ClinGen TOPMed |
|
|
CA369087066 rs1223188763 |
42 | S>G | No |
ClinGen TOPMed |
|
|
CA369087070 rs1258261731 |
42 | S>N | No |
ClinGen gnomAD |
|
|
rs756391593 CA165004307 |
43 | D>G | No |
ClinGen Ensembl |
|
|
rs772709669 CA4443491 |
46 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1174950724 CA369087098 |
46 | A>V | No |
ClinGen gnomAD |
|
|
rs535656420 CA165004308 |
47 | S>A | No |
ClinGen Ensembl |
|
|
CA4443492 rs372855145 |
48 | I>V | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 49 | E>* | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA369087128 rs1424898298 COSM3394473 |
51 | M>V | pancreas [Cosmic] | No |
ClinGen cosmic curated gnomAD |
| TCGA novel | 52 | S>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1003403723 CA165004309 |
53 | H>N | No |
ClinGen Ensembl |
|
|
CA4443493 rs766264707 |
57 | Y>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1230357565 CA369087181 |
58 | S>C | No |
ClinGen TOPMed |
|
|
CA4443495 rs139029166 |
59 | D>N | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ESP ExAC NCI-TCGA TOPMed gnomAD |
|
CA4443496 rs765099187 |
60 | P>S | No |
ClinGen ExAC gnomAD |
|
|
rs375707852 CA4443497 |
64 | A>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 70 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA369087307 rs1489546749 |
74 | E>D | No |
ClinGen gnomAD |
|
|
CA4443526 rs777082788 |
76 | T>A | No |
ClinGen ExAC gnomAD |
|
|
CA369087326 rs1259508932 |
77 | Q>H | No |
ClinGen gnomAD |
|
|
CA369087345 rs1333091980 |
80 | L>V | No |
ClinGen TOPMed |
|
|
rs746529943 CA4443527 |
81 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs911384151 CA165004311 |
83 | K>R | No |
ClinGen Ensembl |
|
|
rs1426099331 CA369087422 |
91 | T>N | No |
ClinGen gnomAD |
|
|
rs942809582 CA165004312 |
92 | L>V | No |
ClinGen Ensembl |
|
|
CA4443530 rs759302905 |
93 | D>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs753880466 CA165004313 |
94 | K>E | No |
ClinGen Ensembl |
|
|
rs756796129 CA4443546 |
95 | S>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4443548 rs550593403 |
96 | A>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4443549 rs550593403 |
96 | A>V | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs749131911 CA4443551 |
103 | L>R | No |
ClinGen ExAC gnomAD |
|
|
rs1563266293 CA369087512 |
104 | E>K | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA4443552 rs768440582 |
105 | G>D | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1158231229 CA369087527 |
106 | I>F | No |
ClinGen gnomAD |
|
| TCGA novel | 108 | N>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1246446772 CA369087569 |
112 | S>L | No |
ClinGen TOPMed |
|
|
CA4443553 rs562479630 |
114 | M>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
rs907783955 CA165004397 |
115 | L>Q | No |
ClinGen TOPMed |
|
|
CA4443555 rs767576072 |
116 | Y>C | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 117 | E>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA369087624 rs1446578124 |
120 | L>P | No |
ClinGen Ensembl |
|
|
rs760744367 CA4443557 |
121 | E>K | No |
ClinGen ExAC gnomAD |
|
|
CA369087648 rs1403572942 |
124 | M>V | No |
ClinGen TOPMed |
|
|
rs754099331 CA4443559 |
125 | T>I | No |
ClinGen ExAC |
|
|
CA369087669 rs1334545331 |
127 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs200230784 CA4443560 |
127 | T>I | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
CA369087682 rs1260190798 |
129 | S>G | No |
ClinGen gnomAD |
|
|
CA165004398 rs937049450 |
130 | I>T | No |
ClinGen TOPMed gnomAD |
|
|
rs548522773 CA4443561 |
131 | E>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA4443562 rs376871952 |
132 | R>C | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4443563 rs759032177 COSM1673462 |
132 | R>H | haematopoietic_and_lymphoid_tissue [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
CA369087705 rs759032177 |
132 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA369087702 rs376871952 |
132 | R>S | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
rs780843547 CA4443564 |
133 | C>F | No |
ClinGen ExAC gnomAD |
|
|
CA369087707 rs1183454110 |
133 | C>R | No |
ClinGen TOPMed gnomAD |
|
|
rs1450635076 CA369087719 |
135 | K>E | No |
ClinGen TOPMed gnomAD |
|
|
rs899954614 CA165004400 |
135 | K>N | No |
ClinGen TOPMed |
|
|
CA4443566 rs141889729 |
135 | K>R | No |
ClinGen 1000Genomes ESP ExAC TOPMed gnomAD |
|
|
rs1410101368 CA369087732 |
137 | G>R | No |
ClinGen gnomAD |
|
|
CA4443593 rs777795975 |
138 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs746956896 CA4443594 |
138 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA164857811 rs892933064 |
139 | S>R | No |
ClinGen TOPMed |
|
|
CA368954160 rs1395078943 |
139 | S>R | No |
ClinGen gnomAD |
|
|
rs776628433 CA4443596 |
143 | R>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
rs1024269408 CA164857840 |
143 | R>H | No |
ClinGen gnomAD |
|
|
CA4443597 rs759833191 |
145 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs1356090577 CA368954215 |
147 | A>E | No |
ClinGen TOPMed |
|
|
CA368954235 rs1333037418 |
149 | A>P | No |
ClinGen gnomAD |
|
|
rs763432278 CA4443600 |
149 | A>V | No |
ClinGen ExAC gnomAD |
|
|
rs969993949 CA164857886 |
150 | S>C | No |
ClinGen Ensembl |
|
|
CA368954262 rs1345744909 |
151 | V>I | No |
ClinGen gnomAD |
|
|
rs1434905030 CA368954274 COSM1547732 |
152 | L>V | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA368954305 rs1232020642 |
154 | I>V | No |
ClinGen gnomAD |
|
|
CA4443603 CA164857915 rs752085385 |
155 | Q>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368954373 rs1314949994 |
159 | G>V | No |
ClinGen TOPMed |
|
| TCGA novel | 162 | S>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs980231435 CA164857927 |
162 | S>N | No |
ClinGen TOPMed |
|
|
rs994394768 CA164857940 |
165 | I>M | No |
ClinGen TOPMed gnomAD |
|
|
rs765909671 CA4443604 |
166 | L>V | No |
ClinGen ExAC gnomAD |
|
|
CA4443606 rs754570815 |
168 | T>S | No |
ClinGen ExAC gnomAD |
|
|
rs1451976158 CA368954535 |
170 | G>E | No |
ClinGen gnomAD |
|
|
rs1251846806 CA368954530 |
170 | G>R | No |
ClinGen gnomAD |
|
|
CA4443607 rs778562557 |
171 | P>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368954567 rs1453574999 |
173 | L>I | No |
ClinGen TOPMed gnomAD |
|
|
rs758156347 CA4443609 |
175 | K>N | No |
ClinGen ExAC gnomAD |
|
|
rs1393243750 CA368954609 |
176 | I>N | No |
ClinGen gnomAD |
|
|
CA368954620 rs1368912974 |
177 | I>N | No |
ClinGen gnomAD |
|
|
rs746947700 CA4443611 |
177 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA4443612 rs757207686 |
178 | C>S | No |
ClinGen ExAC gnomAD |
|
|
rs140670758 CA164857989 |
178 | C>Y | No |
ClinGen ESP |
|
|
CA4443613 rs143002375 |
179 | D>G | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA4443614 rs745957278 |
181 | S>T | No |
ClinGen ExAC TOPMed |
|
|
CA4443615 rs770091139 |
183 | S>N | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA164858002 rs772589743 |
184 | M>L | No |
ClinGen Ensembl |
|
|
CA368954729 rs1258740320 |
185 | Q>K | No |
ClinGen gnomAD |
|
|
rs1261008599 CA368954749 |
186 | A>T | No |
ClinGen TOPMed |
|
|
rs1430525485 CA368954850 |
190 | C>F | No |
ClinGen gnomAD |
|
|
rs1171323325 CA368954855 |
191 | A>S | No |
ClinGen gnomAD |
|
|
rs1372596542 CA368954858 |
191 | A>V | No |
ClinGen gnomAD |
|
|
CA4443651 rs773681445 |
192 | T>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs773681445 CA368954860 |
192 | T>P | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1306161535 CA368954868 |
193 | C>F | No |
ClinGen gnomAD |
|
|
CA368954873 rs1206082367 |
194 | F>L | No |
ClinGen TOPMed |
|
| TCGA novel | 195 | G>D | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368954897 rs1415243429 |
197 | C>F | No |
ClinGen gnomAD |
|
|
rs1312059324 CA368954906 |
198 | C>Y | No |
ClinGen gnomAD |
|
|
CA4443653 rs764711022 |
200 | I>F | No |
ClinGen ExAC gnomAD |
|
|
rs775044131 CA4443654 |
200 | I>M | No |
ClinGen ExAC gnomAD |
|
|
CA368954940 rs1485487805 |
200 | I>T | No |
ClinGen TOPMed |
|
|
rs536863303 CA4443655 |
201 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA164860522 rs779493994 |
203 | D>G | No |
ClinGen Ensembl |
|
|
CA368954981 rs1306456385 |
204 | D>N | No |
ClinGen gnomAD |
|
|
CA368955014 rs1168612613 |
206 | T>A | No |
ClinGen TOPMed gnomAD |
|
|
rs751318627 CA4443657 |
206 | T>I | No |
ClinGen ExAC gnomAD |
|
|
CA368955117 rs778166237 |
210 | S>* | No |
ClinGen ExAC gnomAD |
|
|
rs778166237 CA4443672 |
210 | S>L | No |
ClinGen ExAC gnomAD |
|
|
rs1037364139 CA164860631 |
210 | S>P | No |
ClinGen Ensembl |
|
|
CA249320 RCV000948787 rs79480470 RCV000203116 |
212 | L>V | No |
ClinGen ClinVar 1000Genomes ESP ExAC TOPMed dbSNP gnomAD |
|
|
rs1213100530 CA368955150 |
213 | E>G | No |
ClinGen TOPMed |
|
|
CA368955142 rs1255740672 |
213 | E>Q | No |
ClinGen TOPMed |
|
|
CA4443673 rs771428735 |
214 | C>Y | No |
ClinGen ExAC gnomAD |
|
|
CA164860644 rs993250933 |
215 | L>V | No |
ClinGen Ensembl |
|
| TCGA novel | 217 | N>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1453828784 CA368955229 |
218 | I>M | No |
ClinGen gnomAD |
|
|
CA368955225 rs1483579642 |
218 | I>T | No |
ClinGen TOPMed |
|
|
CA4443674 rs774923155 |
218 | I>V | No |
ClinGen ExAC gnomAD |
|
|
CA4443676 COSM169382 rs768313404 |
222 | S>Y | Variant assessed as Somatic; 0.0 impact. large_intestine [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1260231834 CA368955297 |
223 | Y>C | No |
ClinGen TOPMed |
|
|
CA4443677 rs773842261 |
223 | Y>H | No |
ClinGen ExAC gnomAD |
|
|
rs1159556469 CA368955306 |
224 | L>V | No |
ClinGen gnomAD |
|
|
CA368955357 rs1455328232 |
227 | K>T | No |
ClinGen gnomAD |
|
|
CA4443679 rs761586205 |
228 | D>G | No |
ClinGen ExAC gnomAD |
|
|
rs890309343 CA164860705 |
229 | T>A | No |
ClinGen Ensembl |
|
|
rs1563268655 CA368955388 |
229 | T>N | No |
ClinGen Ensembl |
|
| TCGA novel | 229 | T>S | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4443680 rs767417437 |
230 | T>A | No |
ClinGen ExAC gnomAD |
|
|
rs1030995103 CA164860718 |
231 | V>A | No |
ClinGen TOPMed |
|
| TCGA novel | 231 | V>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368955403 rs1195575640 |
232 | I>T | No |
ClinGen gnomAD |
|
|
rs530418164 CA4443681 |
234 | S>N | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA368955463 rs1354426179 |
241 | H>P | No |
ClinGen TOPMed |
|
|
rs1354426179 CA368955464 |
241 | H>R | No |
ClinGen TOPMed |
|
|
rs1416262591 CA368955480 |
243 | S>N | No |
ClinGen TOPMed |
|
|
CA368955488 rs1346940033 |
244 | S>C | No |
ClinGen TOPMed |
|
|
rs1287818660 CA368955484 |
244 | S>P | No |
ClinGen TOPMed |
|
|
rs1287818660 CA368955483 |
244 | S>T | No |
ClinGen TOPMed |
|
|
rs1346940033 CA368955486 |
244 | S>Y | No |
ClinGen TOPMed |
|
|
CA368955490 rs1215823151 |
245 | L>V | No |
ClinGen gnomAD |
|
| TCGA novel | 248 | W>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368955516 rs1468131448 |
249 | T>A | No |
ClinGen gnomAD |
|
|
rs779101396 CA4443686 |
253 | T>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs752846951 CA4443687 |
255 | C>R | No |
ClinGen ExAC gnomAD |
|
|
rs575419129 CA164860808 |
257 | I>V | No |
ClinGen gnomAD |
|
|
rs758710948 CA4443688 |
258 | N>K | No |
ClinGen ExAC gnomAD |
|
|
CA368955578 rs1424637202 |
259 | E>G | No |
ClinGen TOPMed |
|
| TCGA novel | 263 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368955651 rs1166868507 |
267 | H>R | No |
ClinGen TOPMed |
|
|
rs1313873182 CA368955662 |
268 | F>L | No |
ClinGen gnomAD |
|
|
CA164860962 rs772488118 |
269 | H>L | No |
ClinGen Ensembl |
|
|
rs765225885 CA4443705 |
271 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs991395397 CA164860984 |
272 | P>L | No |
ClinGen Ensembl |
|
|
CA368955684 rs1242911114 |
272 | P>S | No |
ClinGen gnomAD |
|
|
rs1272105845 CA368955689 |
273 | S>G | No |
ClinGen gnomAD |
|
|
CA164861009 rs778277932 |
273 | S>I | No |
ClinGen gnomAD |
|
|
CA368955691 rs778277932 |
273 | S>N | No |
ClinGen gnomAD |
|
|
CA368955710 rs1380955120 |
276 | S>F | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368955720 rs758553704 |
277 | C>W | No |
ClinGen ExAC gnomAD |
|
|
CA368955716 rs1191107867 |
277 | C>Y | No |
ClinGen TOPMed |
|
|
rs1339967186 CA368955726 |
278 | D>G | No |
ClinGen gnomAD |
|
|
CA164861044 rs917816121 |
279 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
CA368955730 rs917816121 |
279 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
rs1257997615 CA368955743 |
281 | N>D | No |
ClinGen gnomAD |
|
|
CA368955746 rs1248736116 |
281 | N>S | No |
ClinGen TOPMed |
|
|
rs764321257 COSM1547731 CA4443709 |
282 | M>I | lung Variant assessed as Somatic; 0.0 impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated ExAC NCI-TCGA gnomAD |
|
rs1243467841 CA368955758 |
283 | R>G | No |
ClinGen gnomAD |
|
|
rs941616258 CA164861053 |
284 | I>T | No |
ClinGen TOPMed |
|
|
CA368955773 rs1475489952 |
285 | A>S | No |
ClinGen gnomAD |
|
|
CA164861079 rs1037249764 |
287 | G>S | No |
ClinGen Ensembl |
|
|
rs370898862 CA4443710 |
287 | G>V | No |
ClinGen ESP ExAC gnomAD |
|
|
rs1387713212 CA368955793 |
288 | E>D | No |
ClinGen TOPMed gnomAD |
|
|
rs757585938 CA4443711 |
291 | A>S | No |
ClinGen ExAC |
|
|
rs781657076 CA4443712 |
292 | L>F | No |
ClinGen ExAC gnomAD |
|
|
rs746358114 CA4443713 |
293 | L>I | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs746358114 CA368955818 |
293 | L>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4443714 rs756651871 |
297 | A>T | No |
ClinGen ExAC gnomAD |
|
|
rs1394616214 CA368955850 |
297 | A>V | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
rs1218634159 CA368955863 |
299 | G>E | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA TOPMed gnomAD |
|
CA368955858 rs1320584376 |
299 | G>R | No |
ClinGen gnomAD |
|
|
CA4443715 rs778228246 |
300 | I>L | No |
ClinGen ExAC gnomAD |
|
|
CA368955881 rs1356602413 |
302 | S>N | No |
ClinGen TOPMed |
|
|
rs769577724 CA4443746 |
304 | F>I | No |
ClinGen ExAC TOPMed gnomAD |
|
| rs979653918 | 306 | Y>L | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1233445060 CA368956758 |
307 | E>V | No |
ClinGen gnomAD |
|
|
CA4443747 rs200913560 |
308 | D>V | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA4443749 rs199958109 |
310 | E>G | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
rs761967828 CA4443751 |
311 | S>Y | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA164866452 rs1016229504 |
312 | L>M | No |
ClinGen TOPMed |
|
|
CA4443752 rs373824184 |
313 | T>M | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
| TCGA novel | 314 | Q>H | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4443754 rs761073324 |
315 | M>L | No |
ClinGen ExAC gnomAD |
|
|
rs1366826223 CA368956820 |
316 | L>P | No |
ClinGen TOPMed gnomAD |
|
|
CA164866489 rs145564103 |
317 | R>T | No |
ClinGen ESP |
|
|
CA164866496 rs1030765204 |
323 | G>R | No |
ClinGen TOPMed gnomAD |
|
|
rs777350451 CA4443758 |
324 | N>S | No |
ClinGen ExAC gnomAD |
|
|
rs751123555 CA4443759 |
325 | K>R | No |
ClinGen ExAC gnomAD |
|
|
CA4443760 rs199704602 |
326 | H>N | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368956888 rs1298095274 |
327 | R>Q | No |
ClinGen TOPMed |
|
|
CA4443761 rs780926014 |
327 | R>W | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4443762 rs745545141 |
329 | K>E | No |
ClinGen ExAC gnomAD |
|
|
rs769607345 CA368956908 |
330 | V>A | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4443763 rs769607345 |
330 | V>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1160858835 CA368956912 |
331 | D>G | No |
ClinGen TOPMed |
|
|
rs1252481308 CA368956909 |
331 | D>N | No |
ClinGen TOPMed gnomAD |
|
|
rs1252481308 CA368956911 |
331 | D>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA164866519 COSM1447347 rs910615810 |
336 | R>Q | large_intestine [Cosmic] | No |
ClinGen cosmic curated TOPMed |
|
rs779881591 CA4443764 |
336 | R>W | No |
ClinGen ExAC gnomAD |
|
|
CA368956976 rs1260083080 |
340 | R>S | No |
ClinGen gnomAD |
|
|
CA164866540 rs976051009 |
342 | V>I | No |
ClinGen TOPMed |
|
|
rs1203216743 CA368957002 |
344 | R>S | No |
ClinGen gnomAD |
|
|
CA164866546 rs958236876 |
345 | A>T | No |
ClinGen Ensembl |
|
|
rs761456509 CA164866558 |
345 | A>V | No |
ClinGen Ensembl |
|
|
rs768595118 CA4443766 |
346 | V>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
COSM1196406 CA164870346 rs926241278 |
349 | R>Q | lung Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed |
|
rs1247513841 CA368957644 |
349 | R>W | No |
ClinGen gnomAD |
|
|
rs780614814 CA4443778 |
350 | D>H | No |
ClinGen ExAC gnomAD |
|
|
CA368957669 rs1414894210 COSM452158 |
353 | T>A | Variant assessed as Somatic; 0.0 impact. breast [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated NCI-TCGA gnomAD |
|
CA4443779 rs188279852 |
353 | T>I | No |
ClinGen 1000Genomes ExAC TOPMed gnomAD |
|
|
CA368957692 rs1357158996 |
356 | I>N | No |
ClinGen gnomAD |
|
| TCGA novel | 357 | K>Q | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs755788400 CA4443780 |
362 | R>C | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4443781 rs779767168 |
362 | R>H | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs775504885 COSM1736434 CA164870364 |
364 | Y>H | central_nervous_system [Cosmic] | No |
ClinGen cosmic curated Ensembl |
| TCGA novel | 366 | D>G | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368957768 rs1563273012 |
367 | C>Y | No |
ClinGen Ensembl |
|
|
rs749103619 CA4443782 |
369 | V>L | No |
ClinGen ExAC gnomAD |
|
|
rs1563273020 CA368957799 |
371 | K>R | No |
ClinGen Ensembl |
|
| TCGA novel | 372 | H>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1434342612 CA368957813 |
373 | T>A | No |
ClinGen TOPMed |
|
|
rs1434342612 CA368957812 |
373 | T>S | No |
ClinGen TOPMed |
|
|
rs1219086671 CA368957822 |
374 | Y>* | No |
ClinGen gnomAD |
|
|
rs778791826 CA4443784 |
374 | Y>C | No |
ClinGen ExAC gnomAD |
|
|
rs778791826 CA368957820 |
374 | Y>S | No |
ClinGen ExAC gnomAD |
|
|
rs1319052465 CA368957854 |
379 | E>Q | No |
ClinGen gnomAD |
|
| TCGA novel | 380 | V>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA164870403 rs150958975 |
380 | V>L | No |
ClinGen ESP |
|
|
rs761649439 CA4443788 |
384 | G>E | No |
ClinGen ExAC gnomAD |
|
|
rs1392610272 CA368957905 |
386 | Q>H | No |
ClinGen gnomAD |
|
|
rs1253630819 CA368957908 |
387 | Y>H | No |
ClinGen gnomAD |
|
|
CA4443805 rs747077385 |
393 | E>A | No |
ClinGen ExAC gnomAD |
|
|
rs1323939253 CA368957964 |
393 | E>K | No |
ClinGen gnomAD |
|
|
CA368957986 TCGA novel rs1584504107 COSM177385 |
396 | R>* | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA Ensembl |
|
rs771235895 CA368957987 |
396 | R>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs771235895 CA4443806 |
396 | R>Q | Variant assessed as Somatic; 4.62e-05 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA TOPMed gnomAD |
|
CA164870821 rs935981895 |
399 | F>L | No |
ClinGen Ensembl |
|
|
CA4443807 rs776958769 |
400 | E>G | No |
ClinGen ExAC TOPMed gnomAD |
|
| TCGA novel | 401 | L>P | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1307825162 CA368958029 |
403 | P>S | No |
ClinGen TOPMed gnomAD |
|
|
rs770267292 CA4443809 |
404 | P>L | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs1416982894 CA368958045 |
405 | V>E | No |
ClinGen TOPMed |
|
|
CA368958077 rs1284973233 |
410 | A>S | No |
ClinGen gnomAD |
|
|
CA4443810 rs775785195 |
410 | A>V | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs906002003 CA164870843 |
411 | T>A | No |
ClinGen gnomAD |
|
|
rs144614382 COSM1447348 CA4443812 |
411 | T>M | large_intestine [Cosmic] | No |
ClinGen cosmic curated 1000Genomes ESP ExAC TOPMed gnomAD |
|
rs760074772 CA4443814 |
412 | L>I | No |
ClinGen ExAC gnomAD |
|
|
rs765923828 CA4443815 |
412 | L>P | No |
ClinGen ExAC gnomAD |
|
|
CA4443816 rs200425886 |
414 | T>M | No |
ClinGen TOPMed gnomAD |
|
|
CA4443819 rs754695378 |
415 | M>T | No |
ClinGen ExAC gnomAD |
|
| TCGA novel | 416 | K>missing | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4443820 rs764950494 |
416 | K>E | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA4443821 rs369365976 |
416 | K>R | No |
ClinGen ESP ExAC TOPMed gnomAD |
|
|
CA368958122 rs574598683 |
417 | I>M | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen 1000Genomes ExAC NCI-TCGA TOPMed gnomAD |
|
rs866141731 CA164870933 |
419 | R>C | Variant assessed as Somatic; impact. [NCI-TCGA] | No |
ClinGen Ensembl NCI-TCGA |
|
CA4443823 rs778656390 COSM1447349 |
419 | R>H | pancreas large_intestine [Cosmic] | No |
ClinGen cosmic curated ExAC TOPMed gnomAD |
|
rs757387748 CA4443825 COSM1084122 |
421 | E>K | Variant assessed as Somatic; 0.0 impact. endometrium [NCI-TCGA, Cosmic] | No |
ClinGen cosmic curated ExAC NCI-TCGA TOPMed gnomAD |
|
CA368958162 rs1436949755 |
422 | R>G | No |
ClinGen gnomAD |
|
|
CA368958651 rs1417822310 |
424 | L>S | No |
ClinGen TOPMed |
|
|
rs751437664 CA4443843 |
426 | N>S | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368958698 rs1453844324 |
427 | S>C | No |
ClinGen gnomAD |
|
| rs1309045147 | 427 | S>C | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No | NCI-TCGA |
|
rs1377454438 CA368958708 |
428 | A>E | No |
ClinGen gnomAD |
|
|
rs567366274 CA4443844 |
428 | A>S | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA368958711 rs1377454438 |
428 | A>V | No |
ClinGen gnomAD |
|
|
rs1373766758 CA368958737 |
430 | F>L | No |
ClinGen Ensembl |
|
|
rs926371388 CA164873784 |
430 | F>V | No |
ClinGen TOPMed gnomAD |
|
|
rs781354249 CA4443845 |
433 | R>* | No |
ClinGen ExAC TOPMed gnomAD |
|
|
rs781354249 CA368958767 |
433 | R>G | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368958770 rs1250996142 COSM281862 |
433 | R>Q | large_intestine Variant assessed as Somatic; impact. [Cosmic, NCI-TCGA] | No |
ClinGen cosmic curated NCI-TCGA TOPMed gnomAD |
|
CA368958777 rs1412955616 |
434 | T>A | No |
ClinGen gnomAD |
|
| TCGA novel | 437 | R>I | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA4443847 rs756365038 |
439 | K>R | No |
ClinGen ExAC TOPMed gnomAD |
|
|
CA368958866 rs1388479118 |
440 | C>Y | No |
ClinGen TOPMed gnomAD |
|
|
CA368958876 rs1489566141 |
441 | R>* | No |
ClinGen TOPMed |
|
|
rs182917954 CA4443849 |
441 | R>Q | No |
ClinGen 1000Genomes ExAC gnomAD |
|
|
CA368958884 rs1330356983 |
442 | D>N | No |
ClinGen gnomAD |
|
| TCGA novel | 443 | K>N | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
| TCGA novel | 444 | R>T | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368958932 rs1230781853 |
445 | A>T | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen NCI-TCGA gnomAD |
|
CA368958953 rs1293116696 |
446 | D>V | No |
ClinGen gnomAD |
|
| TCGA novel | 447 | V>A | Variant assessed as Somatic; impact. [NCI-TCGA] | No | NCI-TCGA |
|
CA368958972 rs1227333900 |
448 | G>* | No |
ClinGen gnomAD |
|
|
rs748589729 CA4443852 |
449 | E>* | Variant assessed as Somatic; 0.0 impact. [NCI-TCGA] | No |
ClinGen ExAC NCI-TCGA gnomAD |
|
rs1357800612 CA368959025 |
451 | F>L | No |
ClinGen gnomAD |
|
|
rs1210999808 CA368959033 |
452 | F>Q | No |
ClinGen TOPMed gnomAD |
|
|
rs917570510 CA164873843 |
452 | F>Y | No |
ClinGen TOPMed |
No associated diseases with O00458
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
| sarcoplasm | The cytoplasm of a muscle cell; includes the sarcoplasmic reticulum. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
6 GO annotations of biological process
| Name | Definition |
|---|---|
| muscle cell differentiation | The process in which a relatively unspecialized cell acquires specialized features of a muscle cell. |
| myoblast fate determination | The cell fate determination process in which a cell becomes capable of differentiating autonomously into a myoblast regardless of its environment; upon determination, the cell fate cannot be reversed. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. |
| negative regulation of axon extension | Any process that stops, prevents, or reduces the frequency, rate or extent of axon outgrowth. |
| negative regulation of collateral sprouting | Any process that stops, prevents, or reduces the frequency, rate or extent of collateral sprouting. |
| skeletal muscle tissue regeneration | The regrowth of skeletal muscle tissue to repair injured or damaged muscle fibers in the postnatal stage. |
| striated muscle tissue development | The process whose specific outcome is the progression of a striated muscle over time, from its formation to the mature structure. Striated muscle contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. Skeletal muscle myoblasts fuse to form myotubes and eventually multinucleated muscle fibers. The fusion of cardiac cells is very rare and can only form binucleate cells. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MPKNKKRNTP | HRGSSAGGGG | SGAAAATAAT | AGGQHRNVQP | FSDEDASIET | MSHCSGYSDP |
| 70 | 80 | 90 | 100 | 110 | 120 |
| SSFAEDGPEV | LDEEGTQEDL | EYKLKGLIDL | TLDKSAKTRQ | AALEGIKNAL | ASKMLYEFIL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| ERRMTLTDSI | ERCLKKGKSD | EQRAAAALAS | VLCIQLGPGI | ESEEILKTLG | PILKKIICDG |
| 190 | 200 | 210 | 220 | 230 | 240 |
| SASMQARQTC | ATCFGVCCFI | ATDDITELYS | TLECLENIFT | KSYLKEKDTT | VICSTPNTVL |
| 250 | 260 | 270 | 280 | 290 | 300 |
| HISSLLAWTL | LLTICPINEV | KKKLEMHFHK | LPSLLSCDDV | NMRIAAGESL | ALLFELARGI |
| 310 | 320 | 330 | 340 | 350 | 360 |
| ESDFFYEDME | SLTQMLRALA | TDGNKHRAKV | DKRKQRSVFR | DVLRAVEERD | FPTETIKFGP |
| 370 | 380 | 390 | 400 | 410 | 420 |
| ERMYIDCWVK | KHTYDTFKEV | LGSGMQYHLQ | SNEFLRNVFE | LGPPVMLDAA | TLKTMKISRF |
| 430 | 440 | 450 | |||
| ERHLYNSAAF | KARTKARSKC | RDKRADVGEF | F |