F2NV13
Gene name |
rnc (Tresu_0151) |
Protein name |
Ribonuclease 3 |
Names |
Ribonuclease III, RNase III |
Species |
Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091) |
KEGG Pathway |
tsu:Tresu_0151 |
EC number |
3.1.26.3: Endoribonucleases producing 5'-phosphomonoesters |
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for F2NV13
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-F2NV13-F1 | Predicted | AlphaFoldDB |
No variants for F2NV13
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for F2NV13 | |||||
No associated diseases with F2NV13
Functions
| Description | ||
|---|---|---|
| EC Number | 3.1.26.3 | Endoribonucleases producing 5'-phosphomonoesters |
| Subcellular Localization |
|
|
| PANTHER Family | ||
| PANTHER Subfamily | ||
| PANTHER Protein Class | ||
| PANTHER Pathway Category | No pathway information available | |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
3 GO annotations of molecular function
| Name | Definition |
|---|---|
| metal ion binding | Binding to a metal ion. |
| ribonuclease III activity | Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt. |
| rRNA binding | Binding to a ribosomal RNA. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| mRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
| rRNA processing | Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. |
| tRNA processing | The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MNRQDIGFVQ | SSINYQFKNL | QLLEQAFTRK | SYSEEHPELQ | NNEVLEFYGD | EILDFFVTKM |
| 70 | 80 | 90 | 100 | 110 | 120 |
| MYKRFSRILN | NELVSEKNEG | ELTKLKSILV | SKESLARCMY | NIGFSKFLYL | GKSDEKNEVY |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KSKSVNEDLF | EAIIGAVAAD | CDWNYEKLEK | VCRTMLDMET | TNGYLALLVK | EKSHRLGFGE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| PCYRPFAWQT | DNPEDWQSDN | LFNMGIGFGG | FGSTSKNPKT | GKHEYGIQVG | ENKFTGIGDG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| IAQAKLNAEQ | KAYHFLIQEE | IKQQFQNLDY | TNPASTLHEL | FQKKVIMEVR | YEFNEYHDEN |
| 310 | 320 | 330 | 340 | 350 | 360 |
| GNPIWNCKAI | LEGYGTFEAD | NASKKQVKQD | ASLKLLKFIA | KTKIEQTEKW | EIPTFYHGMA |
| RIWHDEGKI |