D1BLD0
Gene name |
ftsH |
Protein name |
ATP-dependent zinc metalloprotease FtsH |
Names |
|
Species |
Veillonella parvula (strain ATCC 10790 / DSM 2008 / CCUG 5123 / JCM 12972 / NCTC 11810 / Te3) (Veillonella alcalescens) |
KEGG Pathway |
vpr:Vpar_0504 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for D1BLD0
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-D1BLD0-F1 | Predicted | AlphaFoldDB |
No variants for D1BLD0
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for D1BLD0 | |||||
No associated diseases with D1BLD0
6 regional properties for D1BLD0
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | Peptidase M41 | 404 - 591 | IPR000642 |
| domain | AAA+ ATPase domain | 186 - 325 | IPR003593 |
| domain | ATPase, AAA-type, core | 190 - 322 | IPR003959 |
| conserved_site | ATPase, AAA-type, conserved site | 293 - 311 | IPR003960 |
| domain | Peptidase M41, FtsH extracellular | 8 - 95 | IPR011546 |
| domain | AAA ATPase, AAA+ lid domain | 345 - 389 | IPR041569 |
2 GO annotations of cellular component
| Name | Definition |
|---|---|
| integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
5 GO annotations of molecular function
| Name | Definition |
|---|---|
| ATP binding | Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| ATP hydrolysis activity | Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient. |
| ATP-dependent peptidase activity | Catalysis of the hydrolysis of peptide bonds, driven by ATP hydrolysis. |
| metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. |
| zinc ion binding | Binding to a zinc ion (Zn). |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. |
| proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MGRFTKNIVL | YLLIIAAFVI | AIDAFSGQSA | NKSELSYTGF | IQQVQQKKVE | SVTITNDHGI |
| 70 | 80 | 90 | 100 | 110 | 120 |
| KGKLKNGTEF | NSYAPTDETL | IKTLQDNGVE | ITAAPPEQPA | WWMSLLGSAI | PIIILVVLFF |
| 130 | 140 | 150 | 160 | 170 | 180 |
| FIMQQTQGGG | GRVMNFGKSR | AKLMGEGNVK | VSFKDVAGAE | EAKQELEEVV | EFLKDPGKFT |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TIGAKIPKGV | LLAGPPGTGK | TLLAKAVAGE | AGVPFFTISG | SDFVEMFVGV | GASRVRDLFT |
| 250 | 260 | 270 | 280 | 290 | 300 |
| QAKKNAPCII | FIDEIDAVGR | QRGAGLGGGH | DEREQTLNQL | LVEMDGFGAN | EGIITIAATN |
| 310 | 320 | 330 | 340 | 350 | 360 |
| RPDILDPALL | RPGRFDRQVI | VGRPDLRGRE | AILKVHARNK | PLADDVDLKI | IAKKTPGFTG |
| 370 | 380 | 390 | 400 | 410 | 420 |
| ADLSNLLNEA | ALLAARLNKK | VITMAEVEEA | SEKVSMGPER | RSHIVSDKDR | KLTAYHESGH |
| 430 | 440 | 450 | 460 | 470 | 480 |
| AIVAHLLPHA | DPVHKVTIIP | RGAAGGYTMM | LPTEEQNYKT | KSQLLADIRV | ALGGRIAEAL |
| 490 | 500 | 510 | 520 | 530 | 540 |
| ILDEISTGAS | GDLQSVTNTA | RAMVTRWGMS | DELGPIVFGE | QQEQIFLGKN | LGHERNYSEE |
| 550 | 560 | 570 | 580 | 590 | 600 |
| IAAKIDSEIH | RIVEEAYKDV | TKLLSDNEKF | LHDMANALLE | EETIDAKAVD | NLYKYGTTKE |
| 610 | 620 | 630 | 640 | ||
| PEAEEPKVAS | EADSSIVPEG | VDAKKTTSTV | ADLSEASSNE | IK |