C4R5P7
Gene name |
CCM1 (PAS_chr3_1225) |
Protein name |
Mitochondrial group I intron splicing factor CCM1 |
Names |
|
Species |
Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris) |
KEGG Pathway |
ppa:PAS_chr3_1225 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for C4R5P7
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-C4R5P7-F1 | Predicted | AlphaFoldDB |
No variants for C4R5P7
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for C4R5P7 | |||||
No associated diseases with C4R5P7
8 regional properties for C4R5P7
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | DNA topoisomerase, type IIA, domain A | 714 - 1192 | IPR002205 |
| domain | Histidine kinase/HSP90-like ATPase | 100 - 245 | IPR003594 |
| domain | TOPRIM domain | 476 - 593 | IPR006171 |
| domain | DTHCT | 1508 - 1610 | IPR012542 |
| domain | DNA topoisomerase, type IIA, subunit B, domain 2 | 287 - 447 | IPR013506 |
| conserved_site | DNA topoisomerase, type IIA, conserved site | 480 - 488 | IPR018522 |
| domain | C-terminal associated domain of TOPRIM | 594 - 732 | IPR031660 |
| domain | DNA topoisomerase 2, TOPRIM domain | 476 - 596 | IPR034157 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| mitochondrion | A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
No GO annotations of molecular function
| Name | Definition |
|---|---|
| No GO annotations for molecular function |
2 GO annotations of biological process
| Name | Definition |
|---|---|
| mRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
| RNA splicing | The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MRLSRIGTPK | VSVTRVIPVR | NVVIARRKPV | RASNTDAKTW | LMKEEQRRIR | QKEQEMKQRL |
| 70 | 80 | 90 | 100 | 110 | 120 |
| EELERFKTKV | QKSYIRKEDR | HLAQEIEKDL | DIITDDYNLD | SDVDLVFGEL | MQAEEQPKSL |
| 130 | 140 | 150 | 160 | 170 | 180 |
| KSLPGASDAS | DNTDKSVELF | SFPSPNLTLP | EKVIHHIGPL | VKHISNPENI | QWGRLLLDLE |
| 190 | 200 | 210 | 220 | 230 | 240 |
| KNQGFNGLSA | VDVTRLIQNI | PKEEKYQHMS | LIHEMMFNSG | ISPDRYLTDL | MMTAFSERSY |
| 250 | 260 | 270 | 280 | 290 | 300 |
| YEPLVEALFQ | DYDINGWAPT | DYTFGALIKV | YSKGKKLDKI | NNLLNQMKLK | YHKEPNKKIY |
| 310 | 320 | 330 | 340 | 350 | 360 |
| TMVLQTCMKI | DDYKKTSEVF | DAMKFNSVAT | NPDTTAYGSM | ILMHVLNDNV | EAALDLYDNL |
| 370 | 380 | 390 | 400 | 410 | 420 |
| ETEPDETILL | ALARGCSSRK | VLINRGWDFI | IEYYKRKFPL | NEKLMTVMMY | LTSRDGDLSL |
| 430 | 440 | 450 | 460 | 470 | 480 |
| TRAIYNTIHE | SRFKMTESFS | MNKNDGIALN | VLLRGYFKYP | DNHTVQSKTN | DAVVALRRST |
| 490 | 500 | 510 | 520 | 530 | 540 |
| LALNHFGYHP | KATPFLPVNE | LEEKHILPEV | QAIWSYIILH | YPDIVTSELV | GTYLMILATR |
| 550 | 560 | 570 | 580 | 590 | 600 |
| GSMADFNKAF | EELTLKPVFE | QVDNAVAVEE | ESEQSSELSD | LRLTPLAIRL | SSNIQIKYPR |
| 610 | 620 | 630 | 640 | 650 | 660 |
| NHDIYHIALQ | ACINNKDIEL | GQRIWQERGR | FRKTPEFSMQ | PRNVKHNQDF | EFARDMLKLL |
| 670 | 680 | 690 | 700 | 710 | 720 |
| VNCNELNDAC | RLLLSTETQF | NWEWTYVKPV | YIMAEQLGDE | YAKKVVRRVV | RNKKSKWREE |
| YLQGM |