C1A6R2

PR
Gene name
rplP
Protein name
50S ribosomal protein L16
Names
Species
Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505)
KEGG Pathway
gau:GAU_0880
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

1-49 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for C1A6R2

Entry ID Method Resolution Chain Position Source
AF-C1A6R2-F1 Predicted AlphaFoldDB

No variants for C1A6R2

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for C1A6R2

No associated diseases with C1A6R2

3 regional properties for C1A6R2

Type Name Position InterPro Accession
domain Ribosomal protein L10e/L16 4 - 132 IPR016180
conserved_site Ribosomal protein L16, conserved site 59 - 70 IPR020798-1
conserved_site Ribosomal protein L16, conserved site 82 - 93 IPR020798-2

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
ribonucleoprotein complex A macromolecular complex that contains both RNA and protein molecules.
ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

3 GO annotations of molecular function

Name Definition
rRNA binding Binding to a ribosomal RNA.
structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
tRNA binding Binding to a transfer RNA.

1 GO annotations of biological process

Name Definition
translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MLSPKRVKFR KMFKGRMTGL AHRGSDVSFG TYGLQALEPG WVTSRQIEAC RVAMTRHIKR
70 80 90 100 110 120
GGKVWIRIFP DKPITKKPAE TRMGKGKGSP ELWVAVVKPG RVMFEIEGVS KELAETAMSL
130 140
AAAKLGVKTK FVAREEAVTH EG