B8GYM1

PR
Gene name
xseA
Protein name
Exodeoxyribonuclease 7 large subunit
Names
Exodeoxyribonuclease VII large subunit, Exonuclease VII large subunit
Species
Caulobacter vibrioides (strain NA1000 / CB15N) (Caulobacter crescentus)
KEGG Pathway
ccs:CCNA_02329
EC number
3.1.11.6: Exodeoxyribonucleases producing 5'-phosphomonoesters
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

260-505 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for B8GYM1

Entry ID Method Resolution Chain Position Source
AF-B8GYM1-F1 Predicted AlphaFoldDB

No variants for B8GYM1

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for B8GYM1

No associated diseases with B8GYM1

2 regional properties for B8GYM1

Type Name Position InterPro Accession
domain Exonuclease VII, large subunit, C-terminal 130 - 469 IPR020579
domain OB-fold nucleic acid binding domain 14 - 110 IPR025824

Functions

Description
EC Number 3.1.11.6 Exodeoxyribonucleases producing 5'-phosphomonoesters
Subcellular Localization
  • Cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
exodeoxyribonuclease VII complex An enzyme complex that catalyzes exonucleolytic cleavage in either 5' to 3' or 3' to 5' direction to yield nucleoside 5'-phosphates; it prefers single-stranded DNA.

2 GO annotations of molecular function

Name Definition
exodeoxyribonuclease VII activity Catalysis of the exonucleolytic cleavage in either 5' to 3' or 3' to 5' direction to yield 5'-phosphomononucleotides.
nucleic acid binding Binding to a nucleic acid.

1 GO annotations of biological process

Name Definition
DNA catabolic process The cellular DNA metabolic process resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSDLPPTDSN APPYSVSELA FALKRTLEDR YGFVRLRGEL SKVTHHSNGH VYLTIKDDKS
70 80 90 100 110 120
AIDGVVWKGN VRGLGVRPEH GLEVIVTGKI TTYPAGSRYQ IVIDSMEAAG VGALLAQLER
130 140 150 160 170 180
LKAKLAAEGL FAPERKRPLP SMPAVVGVIT SPTGAVIRDI LHRIRDRWPC QVLVWPCVVQ
190 200 210 220 230 240
GDAAAGQVSA AIRGFNAIQP GGPVPRPDVL IVARGGGSVE DLWAFNDEGL ARTVAEGTIP
250 260 270 280 290 300
LISAVGHETD TTLIDFVSDR RAPTPTAAAE MATPVLAELR ALISDLDRRL NRCGARTIEE
310 320 330 340 350 360
RRTRLVSAAR GLPRPNDLLA LAQQRFDIAS GRLDAALDRN TTVHAQSLLK VTARLTPEAL
370 380 390 400 410 420
GRQRAVKAER LADLSRRLDL AARRAPDRVA QHARLPALWD RLNAAGQRRL QRDADRLENL
430 440 450 460 470 480
EKLRQSLNPE RPLELGFALV RKGDGTLARS AADLVSGERV NLKFKSGDRD AVIDGEGGPA
490 500
PAPTAPAPKP RPKPAAPPAG QGDLF