B8GIR5
Gene name |
pelA |
Protein name |
Protein pelota homolog |
Names |
|
Species |
Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) |
KEGG Pathway |
mpl:Mpal_1565 |
EC number |
|
Protein Class |
|
Descriptions
The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.
Autoinhibitory domains (AIDs)
Target domain |
|
Relief mechanism |
|
Assay |
cis-regPred |
Accessory elements
No accessory elements
Autoinhibited structure
Activated structure
1 structures for B8GIR5
| Entry ID | Method | Resolution | Chain | Position | Source |
|---|---|---|---|---|---|
| AF-B8GIR5-F1 | Predicted | AlphaFoldDB |
No variants for B8GIR5
| Variant ID(s) | Position | Change | Description | Diseaes Association | Provenance |
|---|---|---|---|---|---|
| No variants for B8GIR5 | |||||
No associated diseases with B8GIR5
1 regional properties for B8GIR5
| Type | Name | Position | InterPro Accession |
|---|---|---|---|
| domain | PdxS/SNZ N-terminal domain | 11 - 214 | IPR033755 |
1 GO annotations of cellular component
| Name | Definition |
|---|---|
| cytoplasm | The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
2 GO annotations of molecular function
| Name | Definition |
|---|---|
| endonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. |
| metal ion binding | Binding to a metal ion. |
3 GO annotations of biological process
| Name | Definition |
|---|---|
| nuclear-transcribed mRNA catabolic process, no-go decay | The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA with stalls in translation elongation. |
| nuclear-transcribed mRNA catabolic process, non-stop decay | The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that is lacking a stop codon. |
| RNA surveillance | A process that identifies and degrades defective or aberrant RNAs. |
No homologous proteins in AiPD
| UniProt AC | Gene Name | Protein Name | Species | Evidence Code |
|---|---|---|---|---|
| No homologous proteins | ||||
| 10 | 20 | 30 | 40 | 50 | 60 |
| MKADVQEIRQ | GYGEIRLFPE | SVDDIWHLSH | LIAPGDLVFA | QTFRSVETAT | DKLRPEKAEK |
| 70 | 80 | 90 | 100 | 110 | 120 |
| RPVRIGIRVE | KVEFHQYSSR | LRVTGLIESG | PDVGSYHTLN | LEPNFEVSVI | RFWSKSDRER |
| 130 | 140 | 150 | 160 | 170 | 180 |
| VDRAVNSSGS | GLVHVLAIEE | GEAELFRIRQ | YGPEQVLTIT | MGSGKGAPVD | SREGFFIEAA |
| 190 | 200 | 210 | 220 | 230 | 240 |
| TPLLQITGPV | IIAGPGFIKD | DFARFLKNRY | PAIAANSMVV | ETRRIGRGAV | QEVIGQGVIG |
| 250 | 260 | 270 | 280 | 290 | 300 |
| KIAGDLQLGR | EVQVMDEVLK | RIAMEGLITY | GRAEVGQAIS | FGAADQVIVS | DRLIRDPEVA |
| 310 | 320 | 330 | |||
| RLMEQAEQMN | ATVTVLSSCF | EPGERLWALG | GIAALLRYAL |