B8DPG1

PR
Gene name
glyS
Protein name
Glycine--tRNA ligase beta subunit
Names
Glycyl-tRNA synthetase beta subunit, GlyRS
Species
Desulfovibrio vulgaris (strain DSM 19637 / Miyazaki F)
KEGG Pathway
dvm:DvMF_0291
EC number
6.1.1.14: Ligases forming aminoacyl-tRNA and related compounds
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

36-120 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for B8DPG1

Entry ID Method Resolution Chain Position Source
AF-B8DPG1-F1 Predicted AlphaFoldDB

No variants for B8DPG1

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for B8DPG1

No associated diseases with B8DPG1

1 regional properties for B8DPG1

Type Name Position InterPro Accession
domain DALR anticodon binding 590 - 686 IPR008909

Functions

Description
EC Number 6.1.1.14 Ligases forming aminoacyl-tRNA and related compounds
Subcellular Localization
  • Cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

3 GO annotations of molecular function

Name Definition
arginine-tRNA ligase activity Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).
ATP binding Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
glycine-tRNA ligase activity Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).

2 GO annotations of biological process

Name Definition
arginyl-tRNA aminoacylation The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. The arginyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of an alanine accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.
glycyl-tRNA aminoacylation The process of coupling glycine to glycyl-tRNA, catalyzed by glycyl-tRNA synthetase. The glycyll-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of a glycine-accepting tRNA.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSQFVLEIGF EELPSRFLPG LERELAERFA RALDDDGVEH ESIRVLTTPR RAAVLIEGIN
70 80 90 100 110 120
PVQREAEEVV PGPPVRVAFD AEGKPTKAAE GFARTQGVDM ADIFTLSTDK GEYIAVRKRT
130 140 150 160 170 180
GGANAADLIA TACPTVVAAL PFPKRMRWGS GDFTFGRPLR WLLALFDDAV VPFEVGGVVS
190 200 210 220 230 240
GGVTWGHRIH GAGPLVVKSA DDYLNVVIEK GGVTPDPAER RAMILAGGNA AAEAAGGRIL
250 260 270 280 290 300
WKESLLDEVQ GLAEHPVPLL GDIDPSFLEL PREVLLTSME SHQKSFGVEG PDGALLPHFL
310 320 330 340 350 360
TVLNLTPLDV ALVKKGWERV LRARLEDGRF FWKTDLAASF DAWLAELDNV IFLGPLGSMG
370 380 390 400 410 420
DKTRRLEKLC AWLAKAAGVA DESACARAGR LSKADLVSEM VGEFDTLQGI MGGIYARRMG
430 440 450 460 470 480
EPETVAAALA EQYLPAGPDS PVPATLAGAL LSIADKADTM AGCFGLGMIP TGAADPYALR
490 500 510 520 530 540
RCALGIARIV LEHGLRIDVR ELFRTALALY GERAWKLAPA EALVKLEEFF MARLKNHFMA
550 560 570 580 590 600
AGHETLLVEA ALAADTPEGA GIDVRAAGAR LAALSDFSRR DDFGSAVLTF KRAANIIRKQ
610 620 630 640 650 660
GQEGGAVLDG AYSHALLAED AEKALAARLE EVAPRFDALW AADDFASLFG LLGELRPAVD
670 680 690 700
AFFDGVMVMC DDAAVRTNRL NLLKALTLRL GRLADFGALQ M