B5YL34

PR
Gene name
nuoD2
Protein name
NADH-quinone oxidoreductase subunit D 2
Names
NADH dehydrogenase I subunit D 2, NDH-1 subunit D 2
Species
Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
KEGG Pathway
tye:THEYE_A1125
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

259-334 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for B5YL34

Entry ID Method Resolution Chain Position Source
AF-B5YL34-F1 Predicted AlphaFoldDB

No variants for B5YL34

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for B5YL34

No associated diseases with B5YL34

2 regional properties for B5YL34

Type Name Position InterPro Accession
domain NADH-quinone oxidoreductase, subunit D 127 - 401 IPR001135
conserved_site NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site 50 - 61 IPR014029

Functions

Description
EC Number
Subcellular Localization
  • Cell inner membrane ; Peripheral membrane protein ; Cytoplasmic side
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
plasma membrane The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

3 GO annotations of molecular function

Name Definition
NAD binding Binding to nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
NADH dehydrogenase (ubiquinone) activity Catalysis of the reaction: NADH + ubiquinone + 5 H(+)(in) <=> NAD(+) + ubiquinol + 4 H(+)(out).
quinone binding Binding to a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.

No GO annotations of biological process

Name Definition
No GO annotations for biological process

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MGETEIEKVS DTTFVLQMGP HHPATHGVLK LLCEFEGERV INIKPDVGYL HRGVEKLSES
70 80 90 100 110 120
KTYPGAMTLT DRLDYISSMT NNIGYCLAVE RLMGIEPPPR AKFIRTMVSE MTRLSSHLLW
130 140 150 160 170 180
LATHALDIGA MTVFLYAFRE REQILQFFEK ICGARLTVSY PRIGGVRVDI KEHVLDEIYK
190 200 210 220 230 240
FMDLMLIRVD EYETLLTENR IWIARTRGVG VIAPEDAVLL GLTGPALRGS GVYYDIRKQI
250 260 270 280 290 300
PYDAYSEIDF EVPLGEKGDT YDRYLCRIRE MRQSVLIVKQ CIEKMPEGKI LSDKSPDIDL
310 320 330 340 350 360
PHQAKRKIEP GDSLWNGFIA FSEEKQEIMP KGEIYSAIEA PKGELGFYIV SDGSGRPYRM
370 380 390 400
RVRAPSFIHI SAIPKLCEGH LLADVIAIIG TLDIVMGEAD R