B5YG44

PR
Gene name
rplB
Protein name
50S ribosomal protein L2
Names
Species
Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
KEGG Pathway
tye:THEYE_A1443
EC number
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

201-272 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for B5YG44

Entry ID Method Resolution Chain Position Source
AF-B5YG44-F1 Predicted AlphaFoldDB

No variants for B5YG44

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for B5YG44

No associated diseases with B5YG44

3 regional properties for B5YG44

Type Name Position InterPro Accession
domain Ribosomal Proteins L2, RNA binding domain 42 - 118 IPR022666
domain Ribosomal protein L2, C-terminal 124 - 252 IPR022669
conserved_site Ribosomal protein L2, conserved site 218 - 229 IPR022671

Functions

Description
EC Number
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

1 GO annotations of cellular component

Name Definition
cytosolic large ribosomal subunit The large subunit of a ribosome located in the cytosol.

4 GO annotations of molecular function

Name Definition
RNA binding Binding to an RNA molecule or a portion thereof.
rRNA binding Binding to a ribosomal RNA.
structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
transferase activity Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

1 GO annotations of biological process

Name Definition
cytoplasmic translation The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MGIRRCKPTS AGRRFVTYHD FSEITKDEPY KPLTTCIKKR KGRNNQGRIT SWLKGGGNRK
70 80 90 100 110 120
LYRIIDFKRN KHGIPAKIES IQYDPNRSAR IALLKYMDGE YRYILAPDGL KVGDTIMSGS
130 140 150 160 170 180
GIDIKVGNAL PLKEIPLGTM IHNIELFPNG GGKLVRSAGT AAQLMAKEGK YAHVKLPSGE
190 200 210 220 230 240
VRLINVNCFA TIGQVSNLEH ENVIIGKAGR TRHMGRRPSV RGVAMNPIDH PLGGGEGKSS
250 260 270
GGRAACTPWG KPEGVKTRKN KRTDKFIIKR RK