B5YFH2

PR
Gene name
pyrF
Protein name
Orotidine 5'-phosphate decarboxylase
Names
OMP decarboxylase, OMPDCase, OMPdecase
Species
Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)
KEGG Pathway
dth:DICTH_1461
EC number
4.1.1.23: Carboxy-lyases
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

159-235 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for B5YFH2

Entry ID Method Resolution Chain Position Source
AF-B5YFH2-F1 Predicted AlphaFoldDB

No variants for B5YFH2

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for B5YFH2

No associated diseases with B5YFH2

2 regional properties for B5YFH2

Type Name Position InterPro Accession
domain Ribosomal RNA large subunit methyltransferase K/L-like, FLD domain 190 - 320 IPR000241
conserved_site DNA methylase, N-6 adenine-specific, conserved site 305 - 311 IPR002052

Functions

Description
EC Number 4.1.1.23 Carboxy-lyases
Subcellular Localization
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

No GO annotations of cellular component

Name Definition
No GO annotations for cellular component

1 GO annotations of molecular function

Name Definition
orotidine-5'-phosphate decarboxylase activity Catalysis of the reaction: H(+) + orotidine 5'-phosphate = CO(2) + UMP.

2 GO annotations of biological process

Name Definition
'de novo' pyrimidine nucleobase biosynthetic process The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
'de novo' UMP biosynthetic process The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MRKYDPIIVA LDFPEERKAL EVAEKIIPYV KNFKVGLELF SVAGPHIVKA LKEMGTNVFI
70 80 90 100 110 120
DLKLFDIPNT VVRTLDRLLT LDPFMVTLHI LGGEEMLRES VKLVSQYKES NKTEYPYLLG
130 140 150 160 170 180
VTVLTSFNEE TLRRSWGISR SLPEQVLFLA QLAQETGLDG VIASPWEIEL LRNNLRRPML
190 200 210 220 230 240
IVTPGIRLTK DKTDDQQRIM TPREALERGS DYLVIGRPIT QSSDPYEVIR NIRSQIEDIV
ESRL