B3PYF6

PR
Gene name
xseA
Protein name
Exodeoxyribonuclease 7 large subunit
Names
Exodeoxyribonuclease VII large subunit, Exonuclease VII large subunit
Species
Rhizobium etli (strain CIAT 652)
KEGG Pathway
rec:RHECIAT_CH0000313
EC number
3.1.11.6: Exodeoxyribonucleases producing 5'-phosphomonoesters
Protein Class

Descriptions

The autoinhibited protein was predicted that may have potential autoinhibitory elements via cis-regPred.

Autoinhibitory domains (AIDs)

472-526 (Predicted disordered autoinhibitory region) PR

Target domain

Relief mechanism

Assay

cis-regPred

Accessory elements

No accessory elements

References

Autoinhibited structure

Activated structure

1 structures for B3PYF6

Entry ID Method Resolution Chain Position Source
AF-B3PYF6-F1 Predicted AlphaFoldDB

No variants for B3PYF6

Variant ID(s) Position Change Description Diseaes Association Provenance
No variants for B3PYF6

No associated diseases with B3PYF6

2 regional properties for B3PYF6

Type Name Position InterPro Accession
domain Exonuclease VII, large subunit, C-terminal 133 - 496 IPR020579
domain OB-fold nucleic acid binding domain 16 - 113 IPR025824

Functions

Description
EC Number 3.1.11.6 Exodeoxyribonucleases producing 5'-phosphomonoesters
Subcellular Localization
  • Cytoplasm
PANTHER Family
PANTHER Subfamily
PANTHER Protein Class
PANTHER Pathway Category No pathway information available

2 GO annotations of cellular component

Name Definition
cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
exodeoxyribonuclease VII complex An enzyme complex that catalyzes exonucleolytic cleavage in either 5' to 3' or 3' to 5' direction to yield nucleoside 5'-phosphates; it prefers single-stranded DNA.

2 GO annotations of molecular function

Name Definition
exodeoxyribonuclease VII activity Catalysis of the exonucleolytic cleavage in either 5' to 3' or 3' to 5' direction to yield 5'-phosphomononucleotides.
nucleic acid binding Binding to a nucleic acid.

1 GO annotations of biological process

Name Definition
DNA catabolic process The cellular DNA metabolic process resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one.

No homologous proteins in AiPD

UniProt AC Gene Name Protein Name Species Evidence Code
No homologous proteins
10 20 30 40 50 60
MSNLFDSDSP TNLAEYSVSE LSGSIKRTVE TAFDQVRVRG EISGYRGPHS SGHAYFALKD
70 80 90 100 110 120
DRARIDAVIW KGTFSRLKFR PEEGMEVIAT GKVTTFPGSS KYQIVIETLE PAGAGALMAL
130 140 150 160 170 180
IEERKRKLGA EGLFDAARKK RLPFMPKVIG VVTSPTGAVI RDILHRISDR FPVHVLVWPV
190 200 210 220 230 240
KVQGEGAGDE VANAIRGFNA LEPGGAIARP DVLIVARGGG SLEDLWSFND EIVVRAAAES
250 260 270 280 290 300
RIPLISAVGH ETDWTLIDYA ADVRAPTPTG AAEMAVPVKA ELEAQATALA ARLQGCINRQ
310 320 330 340 350 360
MDQRRQSVRA LMRALPSLDQ LLALPRRRFD EAAAGLGRGL ELNTINKRRG FERVASHLRP
370 380 390 400 410 420
DVLSNRIAER RQLLNDRMAR AERTVERLLD RSKSRIDRAE AILASLPTRL KTQTDRGRER
430 440 450 460 470 480
LGNLTRHADT AIRHQLTRAR AELSAQDRVL QSLSYKNVLK RGYAVIRDED DRPVSQAAAL
490 500 510 520
SAGMGIAIEF ADGRVGAMTT EGGTPPAGAK KRSAKPADPT KQGSLF